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Help | Hide | Top Expression data


Expression data for module #52

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Under-expression is coded with green, over-expression with red color.

Help | Hide | Top The GO tree — Biological processes

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cell killing

Any process in an organism that results in the killing of its own cells or those of another organism, including in some cases the death of the other organism. Killing here refers to the induction of death in one cell by another cell, not cell-autonomous death due to internal or other environmental conditions.

leukocyte mediated cytotoxicity

The directed killing of a target cell by a leukocyte.

immune effector process

Any process of the immune system that occurs as part of an immune response.

immune system process

Any process involved in the development or functioning of the immune system, an organismal system for calibrated responses to potential internal or invasive threats.

leukocyte mediated immunity

Any process involved in the carrying out of an immune response by a leukocyte.

myeloid leukocyte mediated immunity

Any process involved in the carrying out of an immune response by a myeloid leukocyte.

neutrophil mediated immunity

Any process involved in the carrying out of an immune response by a neutrophil.

defense response

Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.

defense response to bacterium

Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism.

defense response to fungus

Reactions triggered in response to the presence of a fungus that act to protect the cell or organism.

response to stress

A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).

immune response

Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat.

cellular defense response

A defense response that is mediated by cells.

growth

The increase in size or mass of an entire organism, a part of an organism or a cell.

biological_process

Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.

cell death

A biological process that results in permanent cessation of all vital functions of a cell.

cytolysis

The rupture of cell membranes and the loss of cytoplasm.

defense response to Gram-positive bacterium

Reactions triggered in response to the presence of a Gram-positive bacterium that act to protect the cell or organism.

response to biotic stimulus

A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a biotic stimulus, a stimulus caused or produced by a living organism.

response to other organism

A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from another living organism.

response to bacterium

A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a bacterium.

response to fungus

A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a fungus.

cellular process

Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level.

macrophage derived foam cell differentiation

The process whereby a monocyte acquires the specialized features of a foam cell. A foam cell is a type of cell containing lipids in small vacuoles and typically seen in atherosclerotic lesions, as well as other conditions.

regulation of macrophage derived foam cell differentiation

Any process that modulates the rate, frequency or extent of macrophage derived foam cell differentiation. Macrophage derived foam cell differentiation is the process whereby a macrophage acquires the specialized features of a foam cell. A foam cell is a type of cell containing lipids in small vacuoles and typically seen in atherosclerotic lesions, as well as other conditions.

positive regulation of macrophage derived foam cell differentiation

Any process that increases the rate, frequency or extent of macrophage derived foam cell differentiation. Macrophage derived foam cell differentiation is the process whereby a macrophage acquires the specialized features of a foam cell. A foam cell is a type of cell containing lipids in small vacuoles and typically seen in atherosclerotic lesions, as well as other conditions.

regulation of cell death

Any process that modulates the rate or frequency of cell death. Cell death is the specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death.

death

A permanent cessation of all vital functions: the end of life; can be applied to a whole organism or to a part of an organism.

cell differentiation

The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate and its subsequent development to the mature state.

symbiosis, encompassing mutualism through parasitism

An interaction between two organisms living together in more or less intimate association. The term host is usually used for the larger (macro) of the two members of a symbiosis. The smaller (micro) member is called the symbiont organism. Microscopic symbionts are often referred to as endosymbionts. The various forms of symbiosis include parasitism, in which the association is disadvantageous or destructive to one of the organisms; mutualism, in which the association is advantageous, or often necessary to one or both and not harmful to either; and commensalism, in which one member of the association benefits while the other is not affected. However, mutualism, parasitism, and commensalism are often not discrete categories of interactions and should rather be perceived as a continuum of interaction ranging from parasitism to mutualism. In fact, the direction of a symbiotic interaction can change during the lifetime of the symbionts due to developmental changes as well as changes in the biotic/abiotic environment in which the interaction occurs.

killing of cells of another organism

Any process in an organism that results in the killing of cells of another organism, including in some cases the death of the other organism. Killing here refers to the induction of death in one cell by another cell, not cell-autonomous death due to internal or other environmental conditions.

developmental process

A biological process whose specific outcome is the progression of an integrated living unit: an anatomical structure (which may be a subcellular structure, cell, tissue, or organ), or organism over time from an initial condition to a later condition.

regulation of growth of symbiont in host

Any process by which the symbiont regulates the increase in its size or mass within the cells or tissues of the host organism. This may (but not necessarily) include a filamentous growth form, and also can include secretion of proteases and lipases to break down. The host is defined as the larger of the organisms involved in the symbiotic interaction.

negative regulation of growth of symbiont in host

Any process by which the symbiont stops, prevents or reduces its increase in size or mass within the cells or tissues of the host organism. The host is defined as the larger of the organisms involved in the symbiotic interaction.

regulation of growth

Any process that modulates the frequency, rate or extent of the growth of all or part of an organism so that it occurs at its proper speed, either globally or in a specific part of the organism's development.

regulation of cytolysis

Any process that modulates the frequency, rate or extent of the rupture of cell membranes and the loss of cytoplasm.

regulation of multi-organism process

Any process that modulates the frequency, rate or extent of a multi-organism process, a process by which an organism has an effect on another organism of the same or different species.

negative regulation of multi-organism process

Any process that stops, prevents or reduces the frequency, rate or extent of a multi-organism process, a process by which an organism has an effect on another organism of the same or different species.

regulation of symbiosis, encompassing mutualism through parasitism

Any process that modulates the frequency, rate or extent of symbiosis, an interaction between two organisms living together in more or less intimate association.

growth involved in symbiotic interaction

The increase in size or mass of an organism occurring when the organism is in a symbiotic interaction.

growth of symbiont involved in interaction with host

The increase in size or mass of an organism, occurring in, on or near the exterior of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.

growth of symbiont in host

The increase in size or mass of an organism, occurring within the cells or tissues of the host organism. This may (but not necessarily) include a filamentous growth form, and also can include secretion of proteases and lipases to break down host tissue. The host is defined as the larger of the organisms involved in a symbiotic interaction.

modulation of growth of symbiont involved in interaction with host

Any process that modulates the frequency, rate or extent of the increase in size or mass of an organism occurring in, on or near the exterior of its host organism.

negative regulation of growth of symbiont involved in interaction with host

Any process that stops, prevents or reduces the frequency, rate or extent of the increase in size or mass of an organism occurring in, on or near the exterior of its host organism.

interspecies interaction between organisms

Any process by which an organism has an effect on an organism of a different species.

regulation of cell differentiation

Any process that modulates the frequency, rate or extent of cell differentiation, the process whereby relatively unspecialized cells acquire specialized structural and functional features.

positive regulation of cell differentiation

Any process that activates or increases the frequency, rate or extent of cell differentiation.

negative regulation of cytolysis

Any process that stops, prevents or reduces the frequency, rate or extent of cytolysis.

negative regulation of growth

Any process that stops, prevents or reduces the rate or extent of growth, the increase in size or mass of all or part of an organism.

positive regulation of biological process

Any process that activates or increases the frequency, rate or extent of a biological process. Biological processes are regulated by many means; examples include the control of gene expression, protein modification or interaction with a protein or substrate molecule.

negative regulation of biological process

Any process that stops, prevents or reduces the frequency, rate or extent of a biological process. Biological processes are regulated by many means; examples include the control of gene expression, protein modification or interaction with a protein or substrate molecule.

positive regulation of cellular process

Any process that activates or increases the frequency, rate or extent of a cellular process, any of those that are carried out at the cellular level, but are not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level.

negative regulation of cellular process

Any process that stops, prevents or reduces the frequency, rate or extent of a cellular process, any of those that are carried out at the cellular level, but are not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level.

cellular developmental process

A biological process whose specific outcome is the progression of a cell over time from an initial condition to a later condition.

regulation of biological process

Any process that modulates the frequency, rate or extent of a biological process. Biological processes are regulated by many means; examples include the control of gene expression, protein modification or interaction with a protein or substrate molecule.

regulation of developmental process

Any process that modulates the frequency, rate or extent of development, the biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote, or a young adult) to a later condition (e.g. a multicellular animal or an aged adult).

regulation of cellular process

Any process that modulates the frequency, rate or extent of a cellular process, any of those that are carried out at the cellular level, but are not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level.

response to stimulus

A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus.

positive regulation of developmental process

Any process that activates or increases the rate or extent of development, the biological process whose specific outcome is the progression of an organism over time from an initial condition (e.g. a zygote, or a young adult) to a later condition (e.g. a multicellular animal or an aged adult).

interaction with symbiont

An interaction between two organisms living together in more or less intimate association. The term symbiont is used for the smaller (macro) of the two members of a symbiosis; the various forms of symbiosis include parasitism, commensalism and mutualism.

multi-organism process

Any process by which an organism has an effect on another organism of the same or different species.

modification of morphology or physiology of other organism involved in symbiotic interaction

The process by which an organism effects a change in the structure or processes of a second organism, where the two organisms are in a symbiotic interaction.

disruption of cells of other organism involved in symbiotic interaction

A process by which an organism has a negative effect on the functioning of the second organism's cells, where the two organisms are in a symbiotic interaction.

modification by host of symbiont morphology or physiology

The process by which an organism effects a change in the structure or processes of a symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.

disruption by host of symbiont cells

Any process by which an organism has a negative effect on the functioning of the symbiont's cells. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.

killing by host of symbiont cells

Any process mediated by an organism that results in the death of cells in the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.

killing of cells in other organism involved in symbiotic interaction

Any process mediated by an organism that results in the death of cells in a second organism, where the two organisms are in a symbiotic interaction.

negative regulation of cell death

Any process that decreases the rate or frequency of cell death. Cell death is the specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death.

biological regulation

Any process that modulates the frequency, rate or extent of any biological process, quality or function.

regulation of biological quality

Any process that modulates the frequency, rate or extent of a biological quality. A biological quality is a measurable attribute of an organism or part of an organism, such as size, mass, shape, color, etc.

neutrophil mediated cytotoxicity

The directed killing of a target cell by a neutrophil.

neutrophil mediated killing of symbiont cell

The directed killing of a symbiont target cell by a neutrophil.

foam cell differentiation

The process whereby a relatively unspecialized cell acquires the specialized features of a foam cell. A foam cell is a type of cell containing lipids in small vacuoles and typically seen in atherosclerotic lesions, as well as other conditions.

all

NA

cell death

A biological process that results in permanent cessation of all vital functions of a cell.

cellular developmental process

A biological process whose specific outcome is the progression of a cell over time from an initial condition to a later condition.

positive regulation of cellular process

Any process that activates or increases the frequency, rate or extent of a cellular process, any of those that are carried out at the cellular level, but are not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level.

positive regulation of developmental process

Any process that activates or increases the rate or extent of development, the biological process whose specific outcome is the progression of an organism over time from an initial condition (e.g. a zygote, or a young adult) to a later condition (e.g. a multicellular animal or an aged adult).

negative regulation of growth

Any process that stops, prevents or reduces the rate or extent of growth, the increase in size or mass of all or part of an organism.

negative regulation of cellular process

Any process that stops, prevents or reduces the frequency, rate or extent of a cellular process, any of those that are carried out at the cellular level, but are not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level.

regulation of growth

Any process that modulates the frequency, rate or extent of the growth of all or part of an organism so that it occurs at its proper speed, either globally or in a specific part of the organism's development.

positive regulation of biological process

Any process that activates or increases the frequency, rate or extent of a biological process. Biological processes are regulated by many means; examples include the control of gene expression, protein modification or interaction with a protein or substrate molecule.

negative regulation of biological process

Any process that stops, prevents or reduces the frequency, rate or extent of a biological process. Biological processes are regulated by many means; examples include the control of gene expression, protein modification or interaction with a protein or substrate molecule.

regulation of developmental process

Any process that modulates the frequency, rate or extent of development, the biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote, or a young adult) to a later condition (e.g. a multicellular animal or an aged adult).

regulation of cellular process

Any process that modulates the frequency, rate or extent of a cellular process, any of those that are carried out at the cellular level, but are not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level.

immune response

Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat.

killing of cells of another organism

Any process in an organism that results in the killing of cells of another organism, including in some cases the death of the other organism. Killing here refers to the induction of death in one cell by another cell, not cell-autonomous death due to internal or other environmental conditions.

regulation of multi-organism process

Any process that modulates the frequency, rate or extent of a multi-organism process, a process by which an organism has an effect on another organism of the same or different species.

negative regulation of multi-organism process

Any process that stops, prevents or reduces the frequency, rate or extent of a multi-organism process, a process by which an organism has an effect on another organism of the same or different species.

regulation of biological process

Any process that modulates the frequency, rate or extent of a biological process. Biological processes are regulated by many means; examples include the control of gene expression, protein modification or interaction with a protein or substrate molecule.

leukocyte mediated cytotoxicity

The directed killing of a target cell by a leukocyte.

immune effector process

Any process of the immune system that occurs as part of an immune response.

negative regulation of growth

Any process that stops, prevents or reduces the rate or extent of growth, the increase in size or mass of all or part of an organism.

negative regulation of cell death

Any process that decreases the rate or frequency of cell death. Cell death is the specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death.

regulation of cell death

Any process that modulates the rate or frequency of cell death. Cell death is the specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death.

positive regulation of cellular process

Any process that activates or increases the frequency, rate or extent of a cellular process, any of those that are carried out at the cellular level, but are not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level.

negative regulation of cellular process

Any process that stops, prevents or reduces the frequency, rate or extent of a cellular process, any of those that are carried out at the cellular level, but are not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level.

regulation of cell differentiation

Any process that modulates the frequency, rate or extent of cell differentiation, the process whereby relatively unspecialized cells acquire specialized structural and functional features.

positive regulation of developmental process

Any process that activates or increases the rate or extent of development, the biological process whose specific outcome is the progression of an organism over time from an initial condition (e.g. a zygote, or a young adult) to a later condition (e.g. a multicellular animal or an aged adult).

positive regulation of cell differentiation

Any process that activates or increases the frequency, rate or extent of cell differentiation.

negative regulation of growth of symbiont involved in interaction with host

Any process that stops, prevents or reduces the frequency, rate or extent of the increase in size or mass of an organism occurring in, on or near the exterior of its host organism.

negative regulation of multi-organism process

Any process that stops, prevents or reduces the frequency, rate or extent of a multi-organism process, a process by which an organism has an effect on another organism of the same or different species.

response to other organism

A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from another living organism.

negative regulation of growth of symbiont involved in interaction with host

Any process that stops, prevents or reduces the frequency, rate or extent of the increase in size or mass of an organism occurring in, on or near the exterior of its host organism.

modulation of growth of symbiont involved in interaction with host

Any process that modulates the frequency, rate or extent of the increase in size or mass of an organism occurring in, on or near the exterior of its host organism.

negative regulation of growth of symbiont involved in interaction with host

Any process that stops, prevents or reduces the frequency, rate or extent of the increase in size or mass of an organism occurring in, on or near the exterior of its host organism.

negative regulation of growth of symbiont in host

Any process by which the symbiont stops, prevents or reduces its increase in size or mass within the cells or tissues of the host organism. The host is defined as the larger of the organisms involved in the symbiotic interaction.

regulation of cytolysis

Any process that modulates the frequency, rate or extent of the rupture of cell membranes and the loss of cytoplasm.

negative regulation of cell death

Any process that decreases the rate or frequency of cell death. Cell death is the specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death.

negative regulation of cytolysis

Any process that stops, prevents or reduces the frequency, rate or extent of cytolysis.

regulation of cell differentiation

Any process that modulates the frequency, rate or extent of cell differentiation, the process whereby relatively unspecialized cells acquire specialized structural and functional features.

positive regulation of cell differentiation

Any process that activates or increases the frequency, rate or extent of cell differentiation.

positive regulation of cell differentiation

Any process that activates or increases the frequency, rate or extent of cell differentiation.

regulation of growth of symbiont in host

Any process by which the symbiont regulates the increase in its size or mass within the cells or tissues of the host organism. This may (but not necessarily) include a filamentous growth form, and also can include secretion of proteases and lipases to break down. The host is defined as the larger of the organisms involved in the symbiotic interaction.

modulation of growth of symbiont involved in interaction with host

Any process that modulates the frequency, rate or extent of the increase in size or mass of an organism occurring in, on or near the exterior of its host organism.

defense response to bacterium

Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism.

defense response to fungus

Reactions triggered in response to the presence of a fungus that act to protect the cell or organism.

regulation of symbiosis, encompassing mutualism through parasitism

Any process that modulates the frequency, rate or extent of symbiosis, an interaction between two organisms living together in more or less intimate association.

growth involved in symbiotic interaction

The increase in size or mass of an organism occurring when the organism is in a symbiotic interaction.

interaction with symbiont

An interaction between two organisms living together in more or less intimate association. The term symbiont is used for the smaller (macro) of the two members of a symbiosis; the various forms of symbiosis include parasitism, commensalism and mutualism.

modification of morphology or physiology of other organism involved in symbiotic interaction

The process by which an organism effects a change in the structure or processes of a second organism, where the two organisms are in a symbiotic interaction.

modification by host of symbiont morphology or physiology

The process by which an organism effects a change in the structure or processes of a symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.

neutrophil mediated killing of symbiont cell

The directed killing of a symbiont target cell by a neutrophil.

regulation of growth of symbiont in host

Any process by which the symbiont regulates the increase in its size or mass within the cells or tissues of the host organism. This may (but not necessarily) include a filamentous growth form, and also can include secretion of proteases and lipases to break down. The host is defined as the larger of the organisms involved in the symbiotic interaction.

negative regulation of growth of symbiont in host

Any process by which the symbiont stops, prevents or reduces its increase in size or mass within the cells or tissues of the host organism. The host is defined as the larger of the organisms involved in the symbiotic interaction.

negative regulation of cytolysis

Any process that stops, prevents or reduces the frequency, rate or extent of cytolysis.

positive regulation of macrophage derived foam cell differentiation

Any process that increases the rate, frequency or extent of macrophage derived foam cell differentiation. Macrophage derived foam cell differentiation is the process whereby a macrophage acquires the specialized features of a foam cell. A foam cell is a type of cell containing lipids in small vacuoles and typically seen in atherosclerotic lesions, as well as other conditions.

disruption by host of symbiont cells

Any process by which an organism has a negative effect on the functioning of the symbiont's cells. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.

killing of cells in other organism involved in symbiotic interaction

Any process mediated by an organism that results in the death of cells in a second organism, where the two organisms are in a symbiotic interaction.

neutrophil mediated cytotoxicity

The directed killing of a target cell by a neutrophil.

regulation of macrophage derived foam cell differentiation

Any process that modulates the rate, frequency or extent of macrophage derived foam cell differentiation. Macrophage derived foam cell differentiation is the process whereby a macrophage acquires the specialized features of a foam cell. A foam cell is a type of cell containing lipids in small vacuoles and typically seen in atherosclerotic lesions, as well as other conditions.

positive regulation of macrophage derived foam cell differentiation

Any process that increases the rate, frequency or extent of macrophage derived foam cell differentiation. Macrophage derived foam cell differentiation is the process whereby a macrophage acquires the specialized features of a foam cell. A foam cell is a type of cell containing lipids in small vacuoles and typically seen in atherosclerotic lesions, as well as other conditions.

killing by host of symbiont cells

Any process mediated by an organism that results in the death of cells in the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.

Help | Hide | Top The GO tree — Cellular Components

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intracellular

The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.

extracellular region

The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.

cellular_component

The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together.

extracellular space

That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid.

cell

The basic structural and functional unit of all organisms. Includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope.

cytoplasm

All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

stored secretory granule

A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell and upon stimulation, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules.

cytoplasmic membrane-bounded vesicle

A membrane-bounded vesicle found in the cytoplasm of the cell.

cytoplasmic vesicle

A vesicle formed of membrane or protein, found in the cytoplasm of a cell.

vesicle

Any small, fluid-filled, spherical organelle enclosed by membrane or protein.

membrane-bounded vesicle

Any small, fluid-filled, spherical organelle enclosed by a lipid bilayer.

organelle

Organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, and prokaryotic structures such as anammoxosomes and pirellulosomes. Excludes the plasma membrane.

membrane-bounded organelle

Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane.

intracellular organelle

Organized structure of distinctive morphology and function, occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane.

intracellular membrane-bounded organelle

Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane.

extracellular region part

Any constituent part of the extracellular region, the space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers constituent parts of the host cell environment outside an intracellular parasite.

intracellular part

Any constituent part of the living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.

cytoplasmic part

Any constituent part of the cytoplasm, all of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

cell part

Any constituent part of a cell, the basic structural and functional unit of all organisms.

all

NA

extracellular region part

Any constituent part of the extracellular region, the space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers constituent parts of the host cell environment outside an intracellular parasite.

cell part

Any constituent part of a cell, the basic structural and functional unit of all organisms.

cytoplasmic vesicle

A vesicle formed of membrane or protein, found in the cytoplasm of a cell.

intracellular membrane-bounded organelle

Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane.

intracellular part

Any constituent part of the living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.

intracellular organelle

Organized structure of distinctive morphology and function, occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane.

cytoplasmic membrane-bounded vesicle

A membrane-bounded vesicle found in the cytoplasm of the cell.

cytoplasmic membrane-bounded vesicle

A membrane-bounded vesicle found in the cytoplasm of the cell.

cytoplasmic part

Any constituent part of the cytoplasm, all of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

cytoplasmic vesicle

A vesicle formed of membrane or protein, found in the cytoplasm of a cell.

Help | Hide | Top The GO tree — Molecular Function

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molecular_function

Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions.

signal transducer activity

Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell.

receptor activity

Combining with an extracellular or intracellular messenger to initiate a change in cell activity.

molecular transducer activity

The molecular function that accepts an input of one form and creates an output of a different form.

all

NA

Help | Show | Top GO BP test for over-representation

Help | Show | Top GO CC test for over-representation

Help | Show | Top GO MF test for over-representation

Help | Hide | Top KEGG Pathway test for over-representation

Id Pvalue ExpCount Count Size Term
04062 1.040e-02 1.434 7
141 Chemokine signaling pathway
04060 1.472e-02 2.013 8
198 Cytokine-cytokine receptor interaction
04612 1.913e-02 0.4473 4
44 Antigen processing and presentation
04650 2.960e-02 0.8743 5
86 Natural killer cell mediated cytotoxicity

Help | Hide | Top miRNA test for over-representation

No enriched terms

Help | Hide | Top Chromosome test for over-representation

No enriched terms

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Entrez genes

ALG9asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae) (ENSG00000086848), score: 0.64 ANKRD22ankyrin repeat domain 22 (ENSG00000152766), score: 0.61 AQP8aquaporin 8 (ENSG00000103375), score: 0.66 ARNTaryl hydrocarbon receptor nuclear translocator (ENSG00000143437), score: 0.59 ATF6activating transcription factor 6 (ENSG00000118217), score: 0.58 BMP10bone morphogenetic protein 10 (ENSG00000163217), score: 0.63 BPIL1bactericidal/permeability-increasing protein-like 1 (ENSG00000078898), score: 0.9 BPIL3bactericidal/permeability-increasing protein-like 3 (ENSG00000167104), score: 0.71 BTLAB and T lymphocyte associated (ENSG00000186265), score: 0.62 C20orf70chromosome 20 open reading frame 70 (ENSG00000131050), score: 0.87 C2CD4BC2 calcium-dependent domain containing 4B (ENSG00000205502), score: 0.58 C2orf66chromosome 2 open reading frame 66 (ENSG00000187944), score: 0.76 C3orf18chromosome 3 open reading frame 18 (ENSG00000088543), score: -0.58 CAMPcathelicidin antimicrobial peptide (ENSG00000164047), score: 0.67 CCL20chemokine (C-C motif) ligand 20 (ENSG00000115009), score: 0.63 CCRL2chemokine (C-C motif) receptor-like 2 (ENSG00000121797), score: 0.62 CD300LFCD300 molecule-like family member f (ENSG00000186074), score: 0.57 CEACAM8carcinoembryonic antigen-related cell adhesion molecule 8 (ENSG00000124469), score: 0.75 CHAC1ChaC, cation transport regulator homolog 1 (E. coli) (ENSG00000128965), score: 0.58 CLEC5AC-type lectin domain family 5, member A (ENSG00000090269), score: 0.62 CRISP3cysteine-rich secretory protein 3 (ENSG00000096006), score: 0.79 CSF2colony stimulating factor 2 (granulocyte-macrophage) (ENSG00000164400), score: 0.69 CTSGcathepsin G (ENSG00000100448), score: 0.57 CXCR1chemokine (C-X-C motif) receptor 1 (ENSG00000163464), score: 0.57 CXCR6chemokine (C-X-C motif) receptor 6 (ENSG00000172215), score: 0.59 DAPP1dual adaptor of phosphotyrosine and 3-phosphoinositides (ENSG00000070190), score: 0.62 DDIT4DNA-damage-inducible transcript 4 (ENSG00000168209), score: 0.58 DHODHdihydroorotate dehydrogenase (ENSG00000102967), score: 0.6 DLG5discs, large homolog 5 (Drosophila) (ENSG00000151208), score: -0.6 DNAH11dynein, axonemal, heavy chain 11 (ENSG00000105877), score: 0.61 ELANEelastase, neutrophil expressed (ENSG00000197561), score: 0.58 FAM83Afamily with sequence similarity 83, member A (ENSG00000147689), score: 0.73 FCARFc fragment of IgA, receptor for (ENSG00000186431), score: 0.67 FGF21fibroblast growth factor 21 (ENSG00000105550), score: 0.64 FGF23fibroblast growth factor 23 (ENSG00000118972), score: 0.79 GNGT1guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 (ENSG00000127928), score: 0.84 GPR97G protein-coupled receptor 97 (ENSG00000182885), score: 0.74 GPRC5DG protein-coupled receptor, family C, group 5, member D (ENSG00000111291), score: 0.66 GRAP2GRB2-related adaptor protein 2 (ENSG00000100351), score: 0.64 GZMKgranzyme K (granzyme 3; tryptase II) (ENSG00000113088), score: 0.58 HALhistidine ammonia-lyase (ENSG00000084110), score: 0.66 HIST1H1Bhistone cluster 1, H1b (ENSG00000184357), score: 0.75 HPS3Hermansky-Pudlak syndrome 3 (ENSG00000163755), score: 0.8 HPSEheparanase (ENSG00000173083), score: 0.75 HSH2Dhematopoietic SH2 domain containing (ENSG00000196684), score: 0.61 IL18RAPinterleukin 18 receptor accessory protein (ENSG00000115607), score: 0.62 IL1RNinterleukin 1 receptor antagonist (ENSG00000136689), score: 0.71 INSIG1insulin induced gene 1 (ENSG00000186480), score: 0.58 ITKIL2-inducible T-cell kinase (ENSG00000113263), score: 0.63 KIAA0146KIAA0146 (ENSG00000164808), score: 0.6 KIR3DL3killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 3 (ENSG00000189013), score: 0.67 KLRD1killer cell lectin-like receptor subfamily D, member 1 (ENSG00000134539), score: 0.65 KRT27keratin 27 (ENSG00000171446), score: 0.92 LILRA5leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5 (ENSG00000187116), score: 0.6 LOC100292202similar to solute carrier family 25, member 25 (ENSG00000148339), score: 0.61 LONP2lon peptidase 2, peroxisomal (ENSG00000102910), score: 0.6 MLANAmelan-A (ENSG00000120215), score: 0.93 MMP8matrix metallopeptidase 8 (neutrophil collagenase) (ENSG00000118113), score: 1 MSMBmicroseminoprotein, beta- (ENSG00000138294), score: 0.89 MTHFD2Lmethylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like (ENSG00000163738), score: 0.84 MXD1MAX dimerization protein 1 (ENSG00000059728), score: 0.62 MYBPHmyosin binding protein H (ENSG00000133055), score: 0.59 NCR1natural cytotoxicity triggering receptor 1 (ENSG00000189430), score: 0.72 NFE2nuclear factor (erythroid-derived 2), 45kDa (ENSG00000123405), score: 0.67 NFIL3nuclear factor, interleukin 3 regulated (ENSG00000165030), score: 0.62 NLRP12NLR family, pyrin domain containing 12 (ENSG00000142405), score: 0.87 NRBF2nuclear receptor binding factor 2 (ENSG00000148572), score: 0.65 OIT3oncoprotein induced transcript 3 (ENSG00000138315), score: 0.58 PF4platelet factor 4 (ENSG00000163737), score: 0.72 PGLYRP1peptidoglycan recognition protein 1 (ENSG00000008438), score: 0.65 PLA2G2Aphospholipase A2, group IIA (platelets, synovial fluid) (ENSG00000188257), score: 0.6 PPBPpro-platelet basic protein (chemokine (C-X-C motif) ligand 7) (ENSG00000163736), score: 0.76 PRDM1PR domain containing 1, with ZNF domain (ENSG00000057657), score: 0.62 PRLprolactin (ENSG00000172179), score: 0.88 PTCRApre T-cell antigen receptor alpha (ENSG00000171611), score: 0.67 RGS18regulator of G-protein signaling 18 (ENSG00000150681), score: 0.64 S100A12S100 calcium binding protein A12 (ENSG00000163221), score: 0.64 S1PR4sphingosine-1-phosphate receptor 4 (ENSG00000125910), score: 0.58 SAMSN1SAM domain, SH3 domain and nuclear localization signals 1 (ENSG00000155307), score: 0.6 SAP18Sin3A-associated protein, 18kDa (ENSG00000150459), score: 0.59 SCGB3A2secretoglobin, family 3A, member 2 (ENSG00000164265), score: 0.86 SELLselectin L (ENSG00000188404), score: 0.64 SERPINA10serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10 (ENSG00000140093), score: 0.6 SIAH2seven in absentia homolog 2 (Drosophila) (ENSG00000181788), score: 0.6 SIGLEC14sialic acid binding Ig-like lectin 14 (ENSG00000105501), score: 0.68 SLC13A5solute carrier family 13 (sodium-dependent citrate transporter), member 5 (ENSG00000141485), score: 0.58 SLC20A1solute carrier family 20 (phosphate transporter), member 1 (ENSG00000144136), score: 0.73 SPINK1serine peptidase inhibitor, Kazal type 1 (ENSG00000164266), score: 0.63 SPP2secreted phosphoprotein 2, 24kDa (ENSG00000072080), score: 0.59 SULT2A1sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1 (ENSG00000105398), score: 0.6 TATtyrosine aminotransferase (ENSG00000198650), score: 0.57 TBC1D14TBC1 domain family, member 14 (ENSG00000132405), score: -0.72 TCN1transcobalamin I (vitamin B12 binding protein, R binder family) (ENSG00000134827), score: 0.67 TFF1trefoil factor 1 (ENSG00000160182), score: 0.7 TIGITT cell immunoreceptor with Ig and ITIM domains (ENSG00000181847), score: 0.73 TLR8toll-like receptor 8 (ENSG00000101916), score: 0.6 TMC3transmembrane channel-like 3 (ENSG00000188869), score: 0.68 TMED6transmembrane emp24 protein transport domain containing 6 (ENSG00000157315), score: 0.63 TOB1transducer of ERBB2, 1 (ENSG00000141232), score: 0.67 TRAT1T cell receptor associated transmembrane adaptor 1 (ENSG00000163519), score: 0.73 TREML1triggering receptor expressed on myeloid cells-like 1 (ENSG00000161911), score: 0.57 TXNDC12thioredoxin domain containing 12 (endoplasmic reticulum) (ENSG00000117862), score: 0.59 VNN2vanin 2 (ENSG00000112303), score: 0.73 ZNF295zinc finger protein 295 (ENSG00000173276), score: 0.61 ZNF498zinc finger protein 498 (ENSG00000197037), score: 0.64

Non-Entrez genes

ENSG00000164808Unknown, score: 0.69

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Id species tissue sex individual
ppa_lv_f_ca1 ppa lv f _
ppy_lv_m_ca1 ppy lv m _
ppy_lv_f_ca1 ppy lv f _

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