Previous module | Next module Module #253, TG: 2.4, TC: 2.8, 117 probes, 117 Entrez genes, 3 conditions

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Expression data for module #253

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Under-expression is coded with green, over-expression with red color.

Help | Hide | Top The GO tree — Biological processes

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transport

The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism by means of some external agent such as a transporter or pore.

ion transport

The directed movement of charged atoms or small charged molecules into, out of, within or between cells by means of some external agent such as a transporter or pore.

cation transport

The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells by means of some external agent such as a transporter or pore.

sodium ion transport

The directed movement of sodium ions (Na+) into, out of, within or between cells by means of some external agent such as a transporter or pore.

metal ion transport

The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells by means of some external agent such as a transporter or pore.

biological_process

Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.

monovalent inorganic cation transport

The directed movement of inorganic cations with a valency of one into, out of, within or between cells by means of some external agent such as a transporter or pore. Inorganic cations are atoms or small molecules with a positive charge which do not contain carbon in covalent linkage.

localization

Any process by which a cell, a substance, or a cellular entity, such as a protein complex or organelle, is transported to, and/or maintained in a specific location.

establishment of localization

The directed movement of a cell, substance or cellular entity, such as a protein complex or organelle, to a specific location.

all

NA

establishment of localization

The directed movement of a cell, substance or cellular entity, such as a protein complex or organelle, to a specific location.

sodium ion transport

The directed movement of sodium ions (Na+) into, out of, within or between cells by means of some external agent such as a transporter or pore.

Help | Hide | Top The GO tree — Cellular Components

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plasma membrane

The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

membrane

Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.

extracellular region

The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.

cellular_component

The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together.

cell

The basic structural and functional unit of all organisms. Includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope.

apical plasma membrane

The region of the plasma membrane located at the apical end of the cell.

extracellular region part

Any constituent part of the extracellular region, the space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers constituent parts of the host cell environment outside an intracellular parasite.

membrane part

Any constituent part of a membrane, a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.

plasma membrane part

Any constituent part of the plasma membrane, the membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

cell part

Any constituent part of a cell, the basic structural and functional unit of all organisms.

apical part of cell

The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue.

all

NA

extracellular region part

Any constituent part of the extracellular region, the space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers constituent parts of the host cell environment outside an intracellular parasite.

cell part

Any constituent part of a cell, the basic structural and functional unit of all organisms.

membrane part

Any constituent part of a membrane, a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.

plasma membrane part

Any constituent part of the plasma membrane, the membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

apical plasma membrane

The region of the plasma membrane located at the apical end of the cell.

Help | Hide | Top The GO tree — Molecular Function

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molecular_function

Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions.

transporter activity

Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells.

transmembrane transporter activity

Enables the transfer of a substance from one side of a membrane to the other.

active transmembrane transporter activity

Catalysis of the transfer of a specific substance or related group of substances from one side of a membrane to the other, up the solute's concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction.

all

NA

Help | Show | Top GO BP test for over-representation

Help | Show | Top GO CC test for over-representation

Help | Show | Top GO MF test for over-representation

Help | Hide | Top KEGG Pathway test for over-representation

Id Pvalue ExpCount Count Size Term
00601 1.435e-02 0.1435 3
7 Glycosphingolipid biosynthesis - lacto and neolacto series
04146 1.446e-02 0.6152 5
30 Peroxisome

Help | Hide | Top miRNA test for over-representation

No enriched terms

Help | Hide | Top Chromosome test for over-representation

No enriched terms

Help | Hide | Top Genes

Entrez genes

A4GNTalpha-1,4-N-acetylglucosaminyltransferase (ENSG00000118017), score: 1 ABCD3ATP-binding cassette, sub-family D (ALD), member 3 (ENSG00000117528), score: 0.36 AGPHD1aminoglycoside phosphotransferase domain containing 1 (ENSG00000188266), score: 0.38 AKR1A1aldo-keto reductase family 1, member A1 (aldehyde reductase) (ENSG00000117448), score: 0.37 ANKRD13Cankyrin repeat domain 13C (ENSG00000118454), score: 0.48 AOAHacyloxyacyl hydrolase (neutrophil) (ENSG00000136250), score: 0.54 ARHGAP24Rho GTPase activating protein 24 (ENSG00000138639), score: 0.38 ARHGEF38Rho guanine nucleotide exchange factor (GEF) 38 (ENSG00000138784), score: 0.38 ARSBarylsulfatase B (ENSG00000113273), score: 0.46 ATP11AATPase, class VI, type 11A (ENSG00000068650), score: 0.47 ATP6V0A4ATPase, H+ transporting, lysosomal V0 subunit a4 (ENSG00000105929), score: 0.36 B3GALT5UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5 (ENSG00000183778), score: 0.44 B4GALT2UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2 (ENSG00000117411), score: -0.45 BMP15bone morphogenetic protein 15 (ENSG00000130385), score: 0.37 BNC2basonuclin 2 (ENSG00000173068), score: 0.4 BPNT13'(2'), 5'-bisphosphate nucleotidase 1 (ENSG00000162813), score: 0.58 C11orf54chromosome 11 open reading frame 54 (ENSG00000182919), score: 0.39 CASRcalcium-sensing receptor (ENSG00000036828), score: 0.39 CCRL1chemokine (C-C motif) receptor-like 1 (ENSG00000129048), score: 0.39 CDCP1CUB domain containing protein 1 (ENSG00000163814), score: 0.44 CDK8cyclin-dependent kinase 8 (ENSG00000132964), score: 0.37 CHPT1choline phosphotransferase 1 (ENSG00000111666), score: 0.37 CHUKconserved helix-loop-helix ubiquitous kinase (ENSG00000213341), score: 0.39 CLDN16claudin 16 (ENSG00000113946), score: 0.37 COL10A1collagen, type X, alpha 1 (ENSG00000123500), score: 0.54 COL4A3collagen, type IV, alpha 3 (Goodpasture antigen) (ENSG00000169031), score: 0.41 COL4A4collagen, type IV, alpha 4 (ENSG00000081052), score: 0.45 CROTcarnitine O-octanoyltransferase (ENSG00000005469), score: 0.36 CUBNcubilin (intrinsic factor-cobalamin receptor) (ENSG00000107611), score: 0.38 DKK2dickkopf homolog 2 (Xenopus laevis) (ENSG00000155011), score: 0.41 EGFepidermal growth factor (ENSG00000138798), score: 0.53 EGFL6EGF-like-domain, multiple 6 (ENSG00000198759), score: 0.51 EHFets homologous factor (ENSG00000135373), score: 0.38 ENTPD4ectonucleoside triphosphate diphosphohydrolase 4 (ENSG00000197217), score: 0.39 ERBB2IPerbb2 interacting protein (ENSG00000112851), score: 0.39 ESRP1epithelial splicing regulatory protein 1 (ENSG00000104413), score: 0.38 EVCEllis van Creveld syndrome (ENSG00000072840), score: 0.39 EXOC6exocyst complex component 6 (ENSG00000138190), score: 0.38 FAR1fatty acyl CoA reductase 1 (ENSG00000197601), score: 0.36 FBP2fructose-1,6-bisphosphatase 2 (ENSG00000130957), score: 0.39 FBXO31F-box protein 31 (ENSG00000103264), score: -0.4 FCHO2FCH domain only 2 (ENSG00000157107), score: 0.39 FERMT1fermitin family member 1 (ENSG00000101311), score: 0.36 FGFBP1fibroblast growth factor binding protein 1 (ENSG00000137440), score: 0.43 FUCA2fucosidase, alpha-L- 2, plasma (ENSG00000001036), score: 0.44 FUT9fucosyltransferase 9 (alpha (1,3) fucosyltransferase) (ENSG00000172461), score: 0.41 GALNT11UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11 (GalNAc-T11) (ENSG00000178234), score: 0.38 GAS2growth arrest-specific 2 (ENSG00000148935), score: 0.43 GBA2glucosidase, beta (bile acid) 2 (ENSG00000070610), score: -0.45 GCNT1glucosaminyl (N-acetyl) transferase 1, core 2 (ENSG00000187210), score: 0.68 H1FXH1 histone family, member X (ENSG00000184897), score: -0.51 HOXA10homeobox A10 (ENSG00000153807), score: 0.4 HOXB7homeobox B7 (ENSG00000120087), score: 0.39 IL5RAinterleukin 5 receptor, alpha (ENSG00000091181), score: 0.46 ILDR1immunoglobulin-like domain containing receptor 1 (ENSG00000145103), score: 0.41 INPP5Binositol polyphosphate-5-phosphatase, 75kDa (ENSG00000204084), score: 0.39 ITGB6integrin, beta 6 (ENSG00000115221), score: 0.41 KCNJ1potassium inwardly-rectifying channel, subfamily J, member 1 (ENSG00000151704), score: 0.4 KCNJ16potassium inwardly-rectifying channel, subfamily J, member 16 (ENSG00000153822), score: 0.38 KIAA1614KIAA1614 (ENSG00000135835), score: 0.36 KLklotho (ENSG00000133116), score: 0.44 KRT80keratin 80 (ENSG00000167767), score: 0.59 LRRC31leucine rich repeat containing 31 (ENSG00000114248), score: 0.44 MCCC1methylcrotonoyl-CoA carboxylase 1 (alpha) (ENSG00000078070), score: 0.36 MEAF6MYST/Esa1-associated factor 6 (ENSG00000163875), score: -0.38 MED28mediator complex subunit 28 (ENSG00000118579), score: 0.42 MEP1Ameprin A, alpha (PABA peptide hydrolase) (ENSG00000112818), score: 0.96 MEP1Bmeprin A, beta (ENSG00000141434), score: 0.98 MMP13matrix metallopeptidase 13 (collagenase 3) (ENSG00000137745), score: 0.58 MYO6myosin VI (ENSG00000196586), score: 0.41 NEDD4neural precursor cell expressed, developmentally down-regulated 4 (ENSG00000069869), score: 0.38 NOX4NADPH oxidase 4 (ENSG00000086991), score: 0.45 NSL1NSL1, MIND kinetochore complex component, homolog (S. cerevisiae) (ENSG00000117697), score: -0.41 NUAK2NUAK family, SNF1-like kinase, 2 (ENSG00000163545), score: 0.39 NUDT19nudix (nucleoside diphosphate linked moiety X)-type motif 19 (ENSG00000213965), score: 0.54 OLFM4olfactomedin 4 (ENSG00000102837), score: 0.5 OPTNoptineurin (ENSG00000123240), score: -0.4 OSBPL3oxysterol binding protein-like 3 (ENSG00000070882), score: 0.39 PKD2polycystic kidney disease 2 (autosomal dominant) (ENSG00000118762), score: 0.4 PLAUplasminogen activator, urokinase (ENSG00000122861), score: 0.45 PLXDC2plexin domain containing 2 (ENSG00000120594), score: 0.38 PPP6R2protein phosphatase 6, regulatory subunit 2 (ENSG00000100239), score: -0.46 PTERphosphotriesterase related (ENSG00000165983), score: 0.38 RRHretinal pigment epithelium-derived rhodopsin homolog (ENSG00000180245), score: 0.45 SGPP1sphingosine-1-phosphate phosphatase 1 (ENSG00000126821), score: 0.37 SIM2single-minded homolog 2 (Drosophila) (ENSG00000159263), score: 0.42 SLC10A2solute carrier family 10 (sodium/bile acid cotransporter family), member 2 (ENSG00000125255), score: 0.46 SLC13A1solute carrier family 13 (sodium/sulfate symporters), member 1 (ENSG00000081800), score: 0.44 SLC18A1solute carrier family 18 (vesicular monoamine), member 1 (ENSG00000036565), score: 0.75 SLC22A4solute carrier family 22 (organic cation/ergothioneine transporter), member 4 (ENSG00000197208), score: 0.4 SLC25A16solute carrier family 25 (mitochondrial carrier; Graves disease autoantigen), member 16 (ENSG00000122912), score: 0.37 SLC25A17solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17 (ENSG00000100372), score: 0.39 SLC34A1solute carrier family 34 (sodium phosphate), member 1 (ENSG00000131183), score: 0.39 SLC5A12solute carrier family 5 (sodium/glucose cotransporter), member 12 (ENSG00000148942), score: 0.38 SLC9A8solute carrier family 9 (sodium/hydrogen exchanger), member 8 (ENSG00000197818), score: 0.4 SMARCA1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 (ENSG00000102038), score: -0.4 SNX29sorting nexin 29 (ENSG00000048471), score: 0.41 SNX6sorting nexin 6 (ENSG00000129515), score: 0.41 SOSTDC1sclerostin domain containing 1 (ENSG00000171243), score: 0.44 SUSD2sushi domain containing 2 (ENSG00000099994), score: 0.38 TCN2transcobalamin II (ENSG00000185339), score: 0.39 TFCP2L1transcription factor CP2-like 1 (ENSG00000115112), score: 0.38 TMBIM4transmembrane BAX inhibitor motif containing 4 (ENSG00000155957), score: 0.41 TMED6transmembrane emp24 protein transport domain containing 6 (ENSG00000157315), score: 0.36 TMEM27transmembrane protein 27 (ENSG00000147003), score: 0.42 TMEM64transmembrane protein 64 (ENSG00000180694), score: 0.4 TMIGD1transmembrane and immunoglobulin domain containing 1 (ENSG00000182271), score: 0.55 TNFAIP8tumor necrosis factor, alpha-induced protein 8 (ENSG00000145779), score: 0.55 TRPV4transient receptor potential cation channel, subfamily V, member 4 (ENSG00000111199), score: 0.37 UPK3Auroplakin 3A (ENSG00000100373), score: 0.54 VWA2von Willebrand factor A domain containing 2 (ENSG00000165816), score: 0.38 WDR89WD repeat domain 89 (ENSG00000140006), score: 0.4 XPNPEP1X-prolyl aminopeptidase (aminopeptidase P) 1, soluble (ENSG00000108039), score: 0.39 ZBTB41zinc finger and BTB domain containing 41 (ENSG00000177888), score: 0.44 ZC3H12Czinc finger CCCH-type containing 12C (ENSG00000149289), score: 0.42 ZNF750zinc finger protein 750 (ENSG00000141579), score: 0.4 ZPLD1zona pellucida-like domain containing 1 (ENSG00000170044), score: 0.47

Non-Entrez genes

Unknown, score:

Help | Hide | Top Conditions

Id species tissue sex individual
mmu_kd_m2_ca1 mmu kd m 2
mmu_kd_f_ca1 mmu kd f _
mmu_kd_m1_ca1 mmu kd m 1

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