Under-expression is coded with green,
over-expression with red color.
extracellular region
The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
cellular_component
The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together.
proteinaceous extracellular matrix
A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity.
extracellular matrix
A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants).
extracellular region part
Any constituent part of the extracellular region, the space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers constituent parts of the host cell environment outside an intracellular parasite.
all
This term is the most general term possible
extracellular region part
Any constituent part of the extracellular region, the space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers constituent parts of the host cell environment outside an intracellular parasite.
A2Malpha-2-macroglobulin (217757_at), score: 0.6 ABCB1ATP-binding cassette, sub-family B (MDR/TAP), member 1 (209993_at), score: 1 ABHD14Aabhydrolase domain containing 14A (210006_at), score: -0.6 AHNAK2AHNAK nucleoprotein 2 (212992_at), score: -0.46 AIM2absent in melanoma 2 (206513_at), score: 0.65 AKAP8LA kinase (PRKA) anchor protein 8-like (218064_s_at), score: 0.6 AKR1B10aldo-keto reductase family 1, member B10 (aldose reductase) (206561_s_at), score: 0.61 ANK3ankyrin 3, node of Ranvier (ankyrin G) (206385_s_at), score: 0.53 APH1Banterior pharynx defective 1 homolog B (C. elegans) (221036_s_at), score: -0.49 APOBEC3Fapolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3F (214995_s_at), score: 0.53 APOBEC3Gapolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G (204205_at), score: 0.56 ARSJarylsulfatase family, member J (219973_at), score: -0.49 ATP6V1B2ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2 (201089_at), score: 0.55 BAZ2Abromodomain adjacent to zinc finger domain, 2A (201353_s_at), score: 0.57 BHMT2betaine-homocysteine methyltransferase 2 (219902_at), score: 0.54 C10orf116chromosome 10 open reading frame 116 (203571_s_at), score: -0.57 C3orf64chromosome 3 open reading frame 64 (221935_s_at), score: -0.53 C4orf31chromosome 4 open reading frame 31 (219747_at), score: -0.52 C5orf30chromosome 5 open reading frame 30 (221823_at), score: -0.62 CAV2caveolin 2 (203323_at), score: -0.45 CCNG1cyclin G1 (208796_s_at), score: -0.48 CD24CD24 molecule (266_s_at), score: 0.69 CD248CD248 molecule, endosialin (219025_at), score: -0.55 CD81CD81 molecule (200675_at), score: -0.48 CDKN1Acyclin-dependent kinase inhibitor 1A (p21, Cip1) (202284_s_at), score: -0.57 CDR2Lcerebellar degeneration-related protein 2-like (213230_at), score: -0.47 COL11A1collagen, type XI, alpha 1 (37892_at), score: -0.65 COL7A1collagen, type VII, alpha 1 (217312_s_at), score: 0.54 COPZ2coatomer protein complex, subunit zeta 2 (219561_at), score: -0.51 CRTAPcartilage associated protein (201380_at), score: -0.61 CRYABcrystallin, alpha B (209283_at), score: -0.68 CTNNBL1catenin, beta like 1 (221021_s_at), score: 0.52 CTSKcathepsin K (202450_s_at), score: -0.47 DDAH1dimethylarginine dimethylaminohydrolase 1 (209094_at), score: -0.48 DDX17DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 (208151_x_at), score: 0.68 DGKDdiacylglycerol kinase, delta 130kDa (208072_s_at), score: 0.66 DHX38DEAH (Asp-Glu-Ala-His) box polypeptide 38 (209178_at), score: 0.53 DIO2deiodinase, iodothyronine, type II (203700_s_at), score: 0.62 DUSP14dual specificity phosphatase 14 (203367_at), score: -0.58 EPHB2EPH receptor B2 (209589_s_at), score: 0.67 EPS8L2EPS8-like 2 (218180_s_at), score: -0.47 FAM105Afamily with sequence similarity 105, member A (219694_at), score: 0.61 FAM169Afamily with sequence similarity 169, member A (213954_at), score: 0.71 FARP1FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived) (201911_s_at), score: -0.52 FASFas (TNF receptor superfamily, member 6) (204780_s_at), score: -0.58 FAT1FAT tumor suppressor homolog 1 (Drosophila) (201579_at), score: -0.7 FBN2fibrillin 2 (203184_at), score: -0.47 FKBP4FK506 binding protein 4, 59kDa (200894_s_at), score: 0.65 FKBP9FK506 binding protein 9, 63 kDa (212169_at), score: -0.7 FZD3frizzled homolog 3 (Drosophila) (219683_at), score: 0.53 GABREgamma-aminobutyric acid (GABA) A receptor, epsilon (204537_s_at), score: 0.57 GAGE4G antigen 4 (207086_x_at), score: 0.96 GAGE6G antigen 6 (208155_x_at), score: 0.93 GALNT6UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 6 (GalNAc-T6) (219956_at), score: -0.5 GAS6growth arrest-specific 6 (202177_at), score: -0.58 GATA3GATA binding protein 3 (209604_s_at), score: 0.82 GHRgrowth hormone receptor (205498_at), score: -0.49 GLSglutaminase (203159_at), score: -0.63 GLTPglycolipid transfer protein (219267_at), score: -0.47 GPR124G protein-coupled receptor 124 (221814_at), score: -0.47 HAS2hyaluronan synthase 2 (206432_at), score: -0.55 HERC5hect domain and RLD 5 (219863_at), score: 0.78 HGSNATheparan-alpha-glucosaminide N-acetyltransferase (218017_s_at), score: -0.65 HLA-DPA1major histocompatibility complex, class II, DP alpha 1 (211990_at), score: 0.56 HRASLSHRAS-like suppressor (219983_at), score: 0.58 HSPB2heat shock 27kDa protein 2 (205824_at), score: -0.47 HSPB6heat shock protein, alpha-crystallin-related, B6 (214767_s_at), score: -0.49 HSPB7heat shock 27kDa protein family, member 7 (cardiovascular) (218934_s_at), score: -0.6 HSPG2heparan sulfate proteoglycan 2 (201655_s_at), score: -0.53 IL11RAinterleukin 11 receptor, alpha (204773_at), score: -0.46 IL7interleukin 7 (206693_at), score: 0.55 IRS2insulin receptor substrate 2 (209185_s_at), score: -0.58 KIAA0802KIAA0802 (213358_at), score: -0.46 KIAA0895KIAA0895 (213424_at), score: 0.55 KRT19keratin 19 (201650_at), score: -0.46 KRT34keratin 34 (206969_at), score: -0.46 KYNUkynureninase (L-kynurenine hydrolase) (217388_s_at), score: 0.52 LAMB3laminin, beta 3 (209270_at), score: 0.52 LBHlimb bud and heart development homolog (mouse) (221011_s_at), score: -0.53 LDOC1leucine zipper, down-regulated in cancer 1 (204454_at), score: -0.59 LEF1lymphoid enhancer-binding factor 1 (221558_s_at), score: 0.69 LIPAlipase A, lysosomal acid, cholesterol esterase (201847_at), score: -0.49 LOC388796hypothetical LOC388796 (65588_at), score: 0.61 LOC728855hypothetical LOC728855 (222001_x_at), score: 0.7 LRP10low density lipoprotein receptor-related protein 10 (201412_at), score: -0.48 LRRC2leucine rich repeat containing 2 (219949_at), score: -0.61 LTBP2latent transforming growth factor beta binding protein 2 (204682_at), score: -0.6 MAGOHmago-nashi homolog, proliferation-associated (Drosophila) (210092_at), score: 0.54 MAN2A1mannosidase, alpha, class 2A, member 1 (205105_at), score: -0.66 MARCH2membrane-associated ring finger (C3HC4) 2 (210075_at), score: -0.47 MARK1MAP/microtubule affinity-regulating kinase 1 (221047_s_at), score: 0.69 MFAP5microfibrillar associated protein 5 (213764_s_at), score: -0.66 MITFmicrophthalmia-associated transcription factor (207233_s_at), score: 0.58 MOXD1monooxygenase, DBH-like 1 (209708_at), score: -0.56 MRC2mannose receptor, C type 2 (37408_at), score: -0.5 MSCmusculin (activated B-cell factor-1) (209928_s_at), score: 0.54 MTUS1mitochondrial tumor suppressor 1 (212096_s_at), score: 0.53 MXRA5matrix-remodelling associated 5 (209596_at), score: -0.47 MXRA8matrix-remodelling associated 8 (213422_s_at), score: -0.53 MYO1Cmyosin IC (214656_x_at), score: -0.52 NCK2NCK adaptor protein 2 (203315_at), score: 0.55 NCRNA00084non-protein coding RNA 84 (214657_s_at), score: 0.56 NEFLneurofilament, light polypeptide (221805_at), score: 0.71 NEK7NIMA (never in mitosis gene a)-related kinase 7 (212530_at), score: -0.49 NFASCneurofascin homolog (chicken) (213438_at), score: -0.52 NGDNneuroguidin, EIF4E binding protein (213794_s_at), score: 0.6 NMUneuromedin U (206023_at), score: 0.64 NOL12nucleolar protein 12 (219324_at), score: 0.58 NONOnon-POU domain containing, octamer-binding (208698_s_at), score: 0.62 NRGNneurogranin (protein kinase C substrate, RC3) (204081_at), score: 0.63 OASL2'-5'-oligoadenylate synthetase-like (210797_s_at), score: 0.98 P4HA1prolyl 4-hydroxylase, alpha polypeptide I (207543_s_at), score: -0.45 PBX1pre-B-cell leukemia homeobox 1 (212148_at), score: -0.49 PCLOpiccolo (presynaptic cytomatrix protein) (213558_at), score: 0.65 PDE10Aphosphodiesterase 10A (205501_at), score: 0.57 PDGFCplatelet derived growth factor C (218718_at), score: -0.58 PILRBpaired immunoglobin-like type 2 receptor beta (220954_s_at), score: 0.65 PODXLpodocalyxin-like (201578_at), score: -0.49 PPM2Cprotein phosphatase 2C, magnesium-dependent, catalytic subunit (218273_s_at), score: 0.57 PPP1R3Cprotein phosphatase 1, regulatory (inhibitor) subunit 3C (204284_at), score: -0.53 PQBP1polyglutamine binding protein 1 (214527_s_at), score: 0.55 PRKCHprotein kinase C, eta (218764_at), score: 0.55 PSG2pregnancy specific beta-1-glycoprotein 2 (208134_x_at), score: -0.47 PSMB4proteasome (prosome, macropain) subunit, beta type, 4 (202243_s_at), score: -0.6 PSMB8proteasome (prosome, macropain) subunit, beta type, 8 (large multifunctional peptidase 7) (209040_s_at), score: 0.59 PTGER3prostaglandin E receptor 3 (subtype EP3) (213933_at), score: -0.51 QPCTglutaminyl-peptide cyclotransferase (205174_s_at), score: -0.54 RAB40BRAB40B, member RAS oncogene family (204547_at), score: -0.49 RAB7L1RAB7, member RAS oncogene family-like 1 (218700_s_at), score: 0.53 RABGAP1LRAB GTPase activating protein 1-like (213982_s_at), score: -0.57 RAD23BRAD23 homolog B (S. cerevisiae) (201223_s_at), score: -0.62 RARRES3retinoic acid receptor responder (tazarotene induced) 3 (204070_at), score: 0.56 RBM3RNA binding motif (RNP1, RRM) protein 3 (222026_at), score: -0.48 RECKreversion-inducing-cysteine-rich protein with kazal motifs (205407_at), score: -0.56 REEP1receptor accessory protein 1 (204364_s_at), score: 0.56 RGP1RGP1 retrograde golgi transport homolog (S. cerevisiae) (203169_at), score: 0.58 RPP14ribonuclease P/MRP 14kDa subunit (204245_s_at), score: 0.53 SAMD4Asterile alpha motif domain containing 4A (212845_at), score: -0.52 SART3squamous cell carcinoma antigen recognized by T cells 3 (209127_s_at), score: 0.54 SC65synaptonemal complex protein SC65 (204078_at), score: -0.47 SERPINB7serpin peptidase inhibitor, clade B (ovalbumin), member 7 (206421_s_at), score: -0.6 SGCDsarcoglycan, delta (35kDa dystrophin-associated glycoprotein) (213543_at), score: -0.5 SIDT2SID1 transmembrane family, member 2 (56256_at), score: -0.5 SLC30A1solute carrier family 30 (zinc transporter), member 1 (212907_at), score: -0.47 SLC4A4solute carrier family 4, sodium bicarbonate cotransporter, member 4 (203908_at), score: -0.59 SLC7A11solute carrier family 7, (cationic amino acid transporter, y+ system) member 11 (217678_at), score: 0.57 SMEK1SMEK homolog 1, suppressor of mek1 (Dictyostelium) (220368_s_at), score: 0.57 SMG1SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans) (210057_at), score: 0.55 SMPD1sphingomyelin phosphodiesterase 1, acid lysosomal (209420_s_at), score: -0.52 SNCAsynuclein, alpha (non A4 component of amyloid precursor) (204466_s_at), score: 0.71 SPARCsecreted protein, acidic, cysteine-rich (osteonectin) (212667_at), score: -0.48 SSR3signal sequence receptor, gamma (translocon-associated protein gamma) (217790_s_at), score: -0.53 STSsteroid sulfatase (microsomal), isozyme S (203767_s_at), score: -0.52 SYTL2synaptotagmin-like 2 (220613_s_at), score: 0.65 TBC1D3TBC1 domain family, member 3 (209403_at), score: 0.58 TBC1D8TBC1 domain family, member 8 (with GRAM domain) (204526_s_at), score: 0.65 TCEAL2transcription elongation factor A (SII)-like 2 (211276_at), score: 0.87 TEKTEK tyrosine kinase, endothelial (206702_at), score: -0.55 TERF1telomeric repeat binding factor (NIMA-interacting) 1 (203448_s_at), score: 0.55 TIMP2TIMP metallopeptidase inhibitor 2 (203167_at), score: -0.66 TMEM204transmembrane protein 204 (219315_s_at), score: -0.5 TMEM47transmembrane protein 47 (209656_s_at), score: -0.68 TMEM51transmembrane protein 51 (218815_s_at), score: 0.54 TMOD1tropomodulin 1 (203661_s_at), score: 0.66 TNS1tensin 1 (221748_s_at), score: -0.63 TOB1transducer of ERBB2, 1 (202704_at), score: -0.53 TSPAN13tetraspanin 13 (217979_at), score: -0.6 TSPYL1TSPY-like 1 (221493_at), score: -0.45 TSPYL5TSPY-like 5 (213122_at), score: -0.52 TYRP1tyrosinase-related protein 1 (205694_at), score: 0.59 UAP1UDP-N-acteylglucosamine pyrophosphorylase 1 (209340_at), score: -0.58 UBE2Hubiquitin-conjugating enzyme E2H (UBC8 homolog, yeast) (221962_s_at), score: 0.52 UBL3ubiquitin-like 3 (201535_at), score: -0.62 UGT1A1UDP glucuronosyltransferase 1 family, polypeptide A1 (207126_x_at), score: 0.89 UGT1A6UDP glucuronosyltransferase 1 family, polypeptide A6 (206094_x_at), score: 0.89 UGT1A8UDP glucuronosyltransferase 1 family, polypeptide A8 (221304_at), score: 0.53 UGT1A9UDP glucuronosyltransferase 1 family, polypeptide A9 (204532_x_at), score: 0.88 VEGFCvascular endothelial growth factor C (209946_at), score: -0.46 VKORC1vitamin K epoxide reductase complex, subunit 1 (217949_s_at), score: -0.46 VWA5Avon Willebrand factor A domain containing 5A (210102_at), score: 0.6 WDR74WD repeat domain 74 (221712_s_at), score: 0.57 WNT5Bwingless-type MMTV integration site family, member 5B (221029_s_at), score: -0.46 WT1Wilms tumor 1 (206067_s_at), score: 0.75
| Id | sample | Experiment | ExpName | Array | Syndrome | Cell.line |
|---|---|---|---|---|---|---|
| E-GEOD-4219-raw-cel-1311956178.cel | 6 | 7 | Sph-mono | hgu133plus2 | none | Sph-mon 1 |
| E-GEOD-4219-raw-cel-1311956824.cel | 24 | 7 | Sph-mono | hgu133plus2 | none | Sph-mon 1 |
| E-GEOD-4219-raw-cel-1311956358.cel | 10 | 7 | Sph-mono | hgu133plus2 | none | Sph-mon 1 |
| E-GEOD-3407-raw-cel-1437949938.cel | 8 | 4 | Cockayne | hgu133a | none | CSB |
| E-GEOD-3407-raw-cel-1437949579.cel | 2 | 4 | Cockayne | hgu133a | none | CSB |
| E-GEOD-3407-raw-cel-1437949721.cel | 5 | 4 | Cockayne | hgu133a | CS | CSB |
| E-GEOD-3407-raw-cel-1437949750.cel | 6 | 4 | Cockayne | hgu133a | CS | CSB |
