Under-expression is coded with green,
over-expression with red color.
vesicle-mediated transport
The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell.
transport
The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism.
post-Golgi vesicle-mediated transport
The directed movement of substances from the Golgi to other parts of the cell, including organelles and the plasma membrane, mediated by small transport vesicles.
biological_process
Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
cellular process
Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level.
intracellular transport
The directed movement of substances within a cell.
Golgi vesicle transport
The directed movement of substances into, out of or within the Golgi apparatus, mediated by vesicles.
localization
Any process by which a cell, a substance, or a cellular entity, such as a protein complex or organelle, is transported to, and/or maintained in a specific location.
establishment of localization
The directed movement of a cell, substance or cellular entity, such as a protein complex or organelle, to a specific location.
cellular localization
Any process by which a substance or cellular entity, such as a protein complex or organelle, is transported to, and/or maintained in, a specific location within or in the membrane of a cell.
establishment of localization in cell
The directed movement of a substance or cellular entity, such as a protein complex or organelle, to a specific location within, or in the membrane of, a cell.
all
This term is the most general term possible
establishment of localization
The directed movement of a cell, substance or cellular entity, such as a protein complex or organelle, to a specific location.
cellular localization
Any process by which a substance or cellular entity, such as a protein complex or organelle, is transported to, and/or maintained in, a specific location within or in the membrane of a cell.
establishment of localization in cell
The directed movement of a substance or cellular entity, such as a protein complex or organelle, to a specific location within, or in the membrane of, a cell.
vesicle-mediated transport
The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell.
intracellular transport
The directed movement of substances within a cell.
Golgi vesicle transport
The directed movement of substances into, out of or within the Golgi apparatus, mediated by vesicles.
ATP13A3ATPase type 13A3 (219558_at), score: -0.85 ATP6V1AATPase, H+ transporting, lysosomal 70kDa, V1 subunit A (201971_s_at), score: -0.8 CDV3CDV3 homolog (mouse) (213548_s_at), score: -0.94 CLIC4chloride intracellular channel 4 (201559_s_at), score: -0.75 COL6A1collagen, type VI, alpha 1 (212940_at), score: -0.76 COPAcoatomer protein complex, subunit alpha (214336_s_at), score: -1 CPDcarboxypeptidase D (201942_s_at), score: -0.95 CYP51A1cytochrome P450, family 51, subfamily A, polypeptide 1 (216607_s_at), score: -0.78 DAPK3death-associated protein kinase 3 (203890_s_at), score: -0.78 DDX3XDEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked (201211_s_at), score: -0.92 DHX9DEAH (Asp-Glu-Ala-His) box polypeptide 9 (212105_s_at), score: -0.94 EXOC5exocyst complex component 5 (218748_s_at), score: -0.76 FN1fibronectin 1 (214701_s_at), score: -0.91 GNA13guanine nucleotide binding protein (G protein), alpha 13 (206917_at), score: -0.74 GNSglucosamine (N-acetyl)-6-sulfatase (203676_at), score: -0.88 GTF2Igeneral transcription factor II, i (210892_s_at), score: -0.9 HP1BP3heterochromatin protein 1, binding protein 3 (220633_s_at), score: -0.73 HSPA4heat shock 70kDa protein 4 (211016_x_at), score: -0.74 KCTD20potassium channel tetramerisation domain containing 20 (214849_at), score: -0.73 KPNA4karyopherin alpha 4 (importin alpha 3) (209653_at), score: -0.81 LMAN1lectin, mannose-binding, 1 (203294_s_at), score: -0.78 MAP3K2mitogen-activated protein kinase kinase kinase 2 (221695_s_at), score: -0.79 MAPK1mitogen-activated protein kinase 1 (208351_s_at), score: -0.76 MAT2Amethionine adenosyltransferase II, alpha (200769_s_at), score: -0.85 MAXMYC associated factor X (210734_x_at), score: -0.95 MBNL2muscleblind-like 2 (Drosophila) (205018_s_at), score: -0.77 PAFAH1B1platelet-activating factor acetylhydrolase, isoform Ib, alpha subunit 45kDa (211547_s_at), score: -0.81 PCDHGA11protocadherin gamma subfamily A, 11 (211876_x_at), score: -0.93 PCDHGA3protocadherin gamma subfamily A, 3 (216352_x_at), score: -0.82 PHTF2putative homeodomain transcription factor 2 (217097_s_at), score: -0.88 PICALMphosphatidylinositol binding clathrin assembly protein (215236_s_at), score: -0.82 PRPF4BPRP4 pre-mRNA processing factor 4 homolog B (yeast) (211090_s_at), score: -0.73 PRRX1paired related homeobox 1 (205991_s_at), score: -0.83 PTBP1polypyrimidine tract binding protein 1 (212016_s_at), score: -0.85 PXNpaxillin (211823_s_at), score: -0.79 RAB5ARAB5A, member RAS oncogene family (206113_s_at), score: -0.95 RAB5CRAB5C, member RAS oncogene family (201156_s_at), score: -0.74 SCAMP1secretory carrier membrane protein 1 (206667_s_at), score: -0.81 SCARB2scavenger receptor class B, member 2 (201647_s_at), score: -0.76 SNAP23synaptosomal-associated protein, 23kDa (214544_s_at), score: -0.74 SRPRsignal recognition particle receptor (docking protein) (200917_s_at), score: -0.75 STIP1stress-induced-phosphoprotein 1 (212009_s_at), score: -0.73 TGFBR2transforming growth factor, beta receptor II (70/80kDa) (207334_s_at), score: -0.82 UBXN4UBX domain protein 4 (212008_at), score: -0.74 WACWW domain containing adaptor with coiled-coil (219679_s_at), score: -0.88 WDR1WD repeat domain 1 (210935_s_at), score: -0.74
| Id | sample | Experiment | ExpName | Array | Syndrome | Cell.line |
|---|---|---|---|---|---|---|
| E-GEOD-3407-raw-cel-1437949854.cel | 7 | 4 | Cockayne | hgu133a | CS | eGFP |
| E-GEOD-3407-raw-cel-1437949938.cel | 8 | 4 | Cockayne | hgu133a | none | CSB |
| 46A.CEL | 1 | 3 | DS-mosaic | hgu133plus2 | none | DS-mosaic 1 |
| 47C.CEL | 5 | 3 | DS-mosaic | hgu133plus2 | Down mosaic | DS-mosaic 5 |
| 47B.CEL | 4 | 3 | DS-mosaic | hgu133plus2 | Down mosaic | DS-mosaic 4 |
| 3Twin.CEL | 3 | 2 | DS-twin | hgu133plus2 | Down | DS-twin 3 |
| E-GEOD-3860-raw-cel-1561690352.cel | 11 | 5 | HGPS | hgu133a | HGPS | AG11498 |
| 46B.CEL | 2 | 3 | DS-mosaic | hgu133plus2 | none | DS-mosaic 2 |
| E-GEOD-3860-raw-cel-1561690344.cel | 10 | 5 | HGPS | hgu133a | none | GM00038C |
| 5CTwin.CEL | 5 | 2 | DS-twin | hgu133plus2 | Down | DS-twin 5 |
| E-GEOD-3860-raw-cel-1561690304.cel | 8 | 5 | HGPS | hgu133a | none | GMO8398C |
| E-GEOD-3407-raw-cel-1437949655.cel | 3 | 4 | Cockayne | hgu133a | none | CSB |
| 1Twin.CEL | 1 | 2 | DS-twin | hgu133plus2 | Down | DS-twin 1 |
| 4Twin.CEL | 4 | 2 | DS-twin | hgu133plus2 | none | DS-twin 4 |
| ctrl c 08-03.CEL | 3 | 1 | DS-CC | hgu133a | none | DS-CC 3 |
| E-TABM-263-raw-cel-1515486031.cel | 20 | 6 | Cycle | hgu133a2 | none | Cycle 1 |
