Previous module | Next module Module #639, TG: 3, TC: 1, 49 probes, 48 Entrez genes, 31 conditions

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Expression data for module #639

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Under-expression is coded with green, over-expression with red color.

Help | Hide | Top The GO tree — Biological processes

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biological_process

Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.

developmental process

A biological process whose specific outcome is the progression of an integrated living unit: an anatomical structure (which may be a subcellular structure, cell, tissue, or organ), or organism over time from an initial condition to a later condition.

negative regulation of biological process

Any process that stops, prevents or reduces the frequency, rate or extent of a biological process. Biological processes are regulated by many means; examples include the control of gene expression, protein modification or interaction with a protein or substrate molecule.

regulation of biological process

Any process that modulates the frequency, rate or extent of a biological process. Biological processes are regulated by many means; examples include the control of gene expression, protein modification or interaction with a protein or substrate molecule.

regulation of developmental process

Any process that modulates the frequency, rate or extent of development, the biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote, or a young adult) to a later condition (e.g. a multicellular animal or an aged adult).

negative regulation of developmental process

Any process that stops, prevents or reduces the rate or extent of development, the biological process whose specific outcome is the progression of an organism over time from an initial condition (e.g. a zygote, or a young adult) to a later condition (e.g. a multicellular animal or an aged adult).

biological regulation

Any process that modulates the frequency, rate or extent of any biological process, quality or function.

all

This term is the most general term possible

negative regulation of developmental process

Any process that stops, prevents or reduces the rate or extent of development, the biological process whose specific outcome is the progression of an organism over time from an initial condition (e.g. a zygote, or a young adult) to a later condition (e.g. a multicellular animal or an aged adult).

negative regulation of biological process

Any process that stops, prevents or reduces the frequency, rate or extent of a biological process. Biological processes are regulated by many means; examples include the control of gene expression, protein modification or interaction with a protein or substrate molecule.

regulation of developmental process

Any process that modulates the frequency, rate or extent of development, the biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote, or a young adult) to a later condition (e.g. a multicellular animal or an aged adult).

regulation of biological process

Any process that modulates the frequency, rate or extent of a biological process. Biological processes are regulated by many means; examples include the control of gene expression, protein modification or interaction with a protein or substrate molecule.

negative regulation of developmental process

Any process that stops, prevents or reduces the rate or extent of development, the biological process whose specific outcome is the progression of an organism over time from an initial condition (e.g. a zygote, or a young adult) to a later condition (e.g. a multicellular animal or an aged adult).

Help | Hide | Top The GO tree — Cellular Components

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Help | Hide | Top The GO tree — Molecular Function

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Help | Show | Top GO BP test for over-representation

Help | Show | Top GO CC test for over-representation

Help | Show | Top GO MF test for over-representation

Help | Hide | Top KEGG Pathway test for over-representation

Id Pvalue ExpCount Count Size Term
05220 1.626e-03 0.3333 5
64 Chronic myeloid leukemia
04010 1.428e-02 0.9531 6
183 MAPK signaling pathway
05212 2.026e-02 0.3438 4
66 Pancreatic cancer
04510 3.956e-02 0.7865 5
151 Focal adhesion

Help | Hide | Top miRNA test for over-representation

No enriched terms

Help | Hide | Top Chromosome test for over-representation

No enriched terms

Help | Hide | Top Genes

Entrez genes

ADCK2aarF domain containing kinase 2 (221893_s_at), score: 0.68 ARHGDIARho GDP dissociation inhibitor (GDI) alpha (213606_s_at), score: 0.78 ATF5activating transcription factor 5 (204999_s_at), score: 0.7 BAT2HLA-B associated transcript 2 (212081_x_at), score: 0.67 BCL2L1BCL2-like 1 (215037_s_at), score: 0.78 BTBD2BTB (POZ) domain containing 2 (207722_s_at), score: 0.78 C19orf61chromosome 19 open reading frame 61 (221335_x_at), score: 0.67 C20orf27chromosome 20 open reading frame 27 (50314_i_at), score: 0.64 CDC42BPBCDC42 binding protein kinase beta (DMPK-like) (217849_s_at), score: 0.74 CNOT3CCR4-NOT transcription complex, subunit 3 (203239_s_at), score: 0.87 COL6A1collagen, type VI, alpha 1 (212940_at), score: 0.72 DENND3DENN/MADD domain containing 3 (212974_at), score: 0.67 EHBP1L1EH domain binding protein 1-like 1 (221755_at), score: 0.66 ELK1ELK1, member of ETS oncogene family (210376_x_at), score: 0.65 FKRPfukutin related protein (219853_at), score: 0.63 FOXC2forkhead box C2 (MFH-1, mesenchyme forkhead 1) (214520_at), score: 0.66 FOXK2forkhead box K2 (203064_s_at), score: 0.69 HMGA1high mobility group AT-hook 1 (210457_x_at), score: 0.86 LOC391132similar to hCG2041276 (216177_at), score: -0.68 MAP1Smicrotubule-associated protein 1S (218522_s_at), score: 0.65 MAP2K2mitogen-activated protein kinase kinase 2 (213490_s_at), score: 0.74 MUC1mucin 1, cell surface associated (207847_s_at), score: 0.63 NAB2NGFI-A binding protein 2 (EGR1 binding protein 2) (216017_s_at), score: 0.62 NF1neurofibromin 1 (211094_s_at), score: 0.77 NFATC4nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4 (205897_at), score: 0.74 OAS32'-5'-oligoadenylate synthetase 3, 100kDa (218400_at), score: 0.62 PCDHGA11protocadherin gamma subfamily A, 11 (211876_x_at), score: 0.8 PCDHGA3protocadherin gamma subfamily A, 3 (216352_x_at), score: 0.83 PLEC1plectin 1, intermediate filament binding protein 500kDa (216971_s_at), score: 0.63 POM121POM121 membrane glycoprotein (rat) (212178_s_at), score: 0.75 PTPROprotein tyrosine phosphatase, receptor type, O (211600_at), score: 0.64 PXNpaxillin (211823_s_at), score: 1 RAB11BRAB11B, member RAS oncogene family (34478_at), score: 0.69 RELAv-rel reticuloendotheliosis viral oncogene homolog A (avian) (209878_s_at), score: 0.71 RPL18AP6ribosomal protein L18a pseudogene 6 (216383_at), score: -0.77 RPS17P5ribosomal protein S17 pseudogene 5 (216348_at), score: -0.69 RXRBretinoid X receptor, beta (215099_s_at), score: 0.63 SCAMP4secretory carrier membrane protein 4 (213244_at), score: 0.71 SENP3SUMO1/sentrin/SMT3 specific peptidase 3 (215113_s_at), score: 0.64 SH3GLB2SH3-domain GRB2-like endophilin B2 (218813_s_at), score: 0.71 SHC1SHC (Src homology 2 domain containing) transforming protein 1 (201469_s_at), score: 0.63 SIRT6sirtuin (silent mating type information regulation 2 homolog) 6 (S. cerevisiae) (219613_s_at), score: 0.63 SOLHsmall optic lobes homolog (Drosophila) (204275_at), score: 0.79 TGFBR2transforming growth factor, beta receptor II (70/80kDa) (207334_s_at), score: 0.71 UBTD1ubiquitin domain containing 1 (219172_at), score: 0.71 ULK1unc-51-like kinase 1 (C. elegans) (209333_at), score: 0.66 VEGFBvascular endothelial growth factor B (203683_s_at), score: 0.82 WDR42AWD repeat domain 42A (202249_s_at), score: 0.64

Non-Entrez genes

212178_s_atUnknown, score: -0.66

Help | Hide | Top Conditions

Id sample Experiment ExpName Array Syndrome Cell.line
46B.CEL 2 3 DS-mosaic hgu133plus2 none DS-mosaic 2
E-TABM-263-raw-cel-1515485771.cel 7 6 Cycle hgu133a2 none Cycle 1
E-TABM-263-raw-cel-1515486371.cel 37 6 Cycle hgu133a2 none Cycle 1
E-TABM-263-raw-cel-1515485751.cel 6 6 Cycle hgu133a2 none Cycle 1
E-TABM-263-raw-cel-1515486431.cel 40 6 Cycle hgu133a2 none Cycle 1
ctrl c 08-03.CEL 3 1 DS-CC hgu133a none DS-CC 3
E-TABM-263-raw-cel-1515485671.cel 2 6 Cycle hgu133a2 none Cycle 1
E-TABM-263-raw-cel-1515486091.cel 23 6 Cycle hgu133a2 none Cycle 1
E-GEOD-3407-raw-cel-1437949655.cel 3 4 Cockayne hgu133a none CSB
E-TABM-263-raw-cel-1515486151.cel 26 6 Cycle hgu133a2 none Cycle 1
E-TABM-263-raw-cel-1515485891.cel 13 6 Cycle hgu133a2 none Cycle 1
E-TABM-263-raw-cel-1515485811.cel 9 6 Cycle hgu133a2 none Cycle 1
E-GEOD-3860-raw-cel-1561690256.cel 6 5 HGPS hgu133a none GMO8398C
E-TABM-263-raw-cel-1515486011.cel 19 6 Cycle hgu133a2 none Cycle 1
E-TABM-263-raw-cel-1515485931.cel 15 6 Cycle hgu133a2 none Cycle 1
E-GEOD-3860-raw-cel-1561690272.cel 7 5 HGPS hgu133a HGPS AG11498
4Twin.CEL 4 2 DS-twin hgu133plus2 none DS-twin 4
E-TABM-263-raw-cel-1515486251.cel 31 6 Cycle hgu133a2 none Cycle 1
E-TABM-263-raw-cel-1515486131.cel 25 6 Cycle hgu133a2 none Cycle 1
E-TABM-263-raw-cel-1515485831.cel 10 6 Cycle hgu133a2 none Cycle 1
E-TABM-263-raw-cel-1515486171.cel 27 6 Cycle hgu133a2 none Cycle 1
E-GEOD-3407-raw-cel-1437949938.cel 8 4 Cockayne hgu133a none CSB
E-TABM-263-raw-cel-1515486071.cel 22 6 Cycle hgu133a2 none Cycle 1
47B.CEL 4 3 DS-mosaic hgu133plus2 Down mosaic DS-mosaic 4
46C.CEL 3 3 DS-mosaic hgu133plus2 none DS-mosaic 3
E-TABM-263-raw-cel-1515485711.cel 4 6 Cycle hgu133a2 none Cycle 1
E-TABM-263-raw-cel-1515485991.cel 18 6 Cycle hgu133a2 none Cycle 1
E-TABM-263-raw-cel-1515485871.cel 12 6 Cycle hgu133a2 none Cycle 1
E-TABM-263-raw-cel-1515486411.cel 39 6 Cycle hgu133a2 none Cycle 1
E-TABM-263-raw-cel-1515486211.cel 29 6 Cycle hgu133a2 none Cycle 1
E-TABM-263-raw-cel-1515485691.cel 3 6 Cycle hgu133a2 none Cycle 1

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