Under-expression is coded with green,
over-expression with red color.
multicellular organismal development
The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult).
biological_process
Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
multicellular organismal process
Any biological process, occurring at the level of a multicellular organism, pertinent to its function.
developmental process
A biological process whose specific outcome is the progression of an integrated living unit: an anatomical structure (which may be a subcellular structure, cell, tissue, or organ), or organism over time from an initial condition to a later condition.
system development
The process whose specific outcome is the progression of an organismal system over time, from its formation to the mature structure. A system is a regularly interacting or interdependent group of organs or tissues that work together to carry out a given biological process.
anatomical structure development
The biological process whose specific outcome is the progression of an anatomical structure from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure, whatever form that may be including its natural destruction. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome.
all
This term is the most general term possible
multicellular organismal development
The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult).
system development
The process whose specific outcome is the progression of an organismal system over time, from its formation to the mature structure. A system is a regularly interacting or interdependent group of organs or tissues that work together to carry out a given biological process.
extracellular region
The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
cellular_component
The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together.
extracellular space
That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid.
extracellular region part
Any constituent part of the extracellular region, the space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers constituent parts of the host cell environment outside an intracellular parasite.
all
This term is the most general term possible
extracellular region part
Any constituent part of the extracellular region, the space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers constituent parts of the host cell environment outside an intracellular parasite.
calcium ion binding
Interacting selectively with calcium ions (Ca2+).
molecular_function
Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions.
binding
The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
metal ion binding
Interacting selectively with any metal ion.
ion binding
Interacting selectively with ions, charged atoms or groups of atoms.
cation binding
Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge.
all
This term is the most general term possible
calcium ion binding
Interacting selectively with calcium ions (Ca2+).
ABCA8ATP-binding cassette, sub-family A (ABC1), member 8 (204719_at), score: 0.71 ABCG2ATP-binding cassette, sub-family G (WHITE), member 2 (209735_at), score: -0.79 ADAMTSL3ADAMTS-like 3 (213974_at), score: 0.68 AGTR1angiotensin II receptor, type 1 (205357_s_at), score: -0.68 AKR1C3aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II) (209160_at), score: 0.68 ANK3ankyrin 3, node of Ranvier (ankyrin G) (206385_s_at), score: -0.77 ANKRD6ankyrin repeat domain 6 (204671_s_at), score: -0.72 ANO3anoctamin 3 (215241_at), score: -0.69 ANXA3annexin A3 (209369_at), score: 0.71 AQP1aquaporin 1 (Colton blood group) (209047_at), score: -0.73 ARHGAP29Rho GTPase activating protein 29 (203910_at), score: 0.78 ATF3activating transcription factor 3 (202672_s_at), score: -0.75 BNC2basonuclin 2 (220272_at), score: 0.78 C8orf84chromosome 8 open reading frame 84 (214725_at), score: 0.69 CARHSP1calcium regulated heat stable protein 1, 24kDa (218384_at), score: 0.72 CCDC81coiled-coil domain containing 81 (220389_at), score: -0.73 CCDC92coiled-coil domain containing 92 (218175_at), score: -0.69 CD200CD200 molecule (209583_s_at), score: 0.74 CD55CD55 molecule, decay accelerating factor for complement (Cromer blood group) (201925_s_at), score: 0.88 CFHcomplement factor H (213800_at), score: 0.71 CFHR1complement factor H-related 1 (215388_s_at), score: 0.67 CHRDL1chordin-like 1 (209763_at), score: 0.73 CORINcorin, serine peptidase (220356_at), score: -0.79 CUGBP2CUG triplet repeat, RNA binding protein 2 (202158_s_at), score: 0.78 CXCL1chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity, alpha) (204470_at), score: 0.73 CYB5Acytochrome b5 type A (microsomal) (215726_s_at), score: 0.72 CYFIP2cytoplasmic FMR1 interacting protein 2 (215785_s_at), score: -0.79 DAAM2dishevelled associated activator of morphogenesis 2 (212793_at), score: -0.76 DPYSL3dihydropyrimidinase-like 3 (201431_s_at), score: 0.75 DSG2desmoglein 2 (217901_at), score: 0.77 EDN1endothelin 1 (218995_s_at), score: 0.68 EFHD1EF-hand domain family, member D1 (209343_at), score: -0.81 EMP1epithelial membrane protein 1 (201325_s_at), score: 0.67 EN1engrailed homeobox 1 (220559_at), score: -0.77 ENPEPglutamyl aminopeptidase (aminopeptidase A) (204844_at), score: -0.76 FBLN1fibulin 1 (202995_s_at), score: 0.69 FBLN2fibulin 2 (203886_s_at), score: -0.76 FGL2fibrinogen-like 2 (204834_at), score: 0.74 FOXE1forkhead box E1 (thyroid transcription factor 2) (206912_at), score: -0.73 FOXO1forkhead box O1 (202724_s_at), score: 0.72 FUT8fucosyltransferase 8 (alpha (1,6) fucosyltransferase) (203988_s_at), score: 0.75 GALNT12UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12) (218885_s_at), score: 0.68 GPR116G protein-coupled receptor 116 (212950_at), score: -1 GPR126G protein-coupled receptor 126 (213094_at), score: 0.75 GPR4G protein-coupled receptor 4 (206236_at), score: 0.76 GPRC5BG protein-coupled receptor, family C, group 5, member B (203632_s_at), score: 0.71 HOXB7homeobox B7 (204779_s_at), score: 0.75 HSPB8heat shock 22kDa protein 8 (221667_s_at), score: -0.79 ID1inhibitor of DNA binding 1, dominant negative helix-loop-helix protein (208937_s_at), score: 0.75 IFI27interferon, alpha-inducible protein 27 (202411_at), score: 0.71 ITGA8integrin, alpha 8 (214265_at), score: -0.94 KCTD12potassium channel tetramerisation domain containing 12 (212192_at), score: 0.83 KLF5Kruppel-like factor 5 (intestinal) (209212_s_at), score: 0.83 LAMA4laminin, alpha 4 (202202_s_at), score: 0.87 LAMC2laminin, gamma 2 (202267_at), score: 0.73 LGR5leucine-rich repeat-containing G protein-coupled receptor 5 (213880_at), score: -0.76 LIMCH1LIM and calponin homology domains 1 (212327_at), score: 0.71 LIPGlipase, endothelial (219181_at), score: 0.77 LMOD1leiomodin 1 (smooth muscle) (203766_s_at), score: -0.75 LPPR4plasticity related gene 1 (213496_at), score: -0.79 MFGE8milk fat globule-EGF factor 8 protein (210605_s_at), score: -0.68 MMP2matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase) (201069_at), score: 0.75 MYH10myosin, heavy chain 10, non-muscle (212372_at), score: 0.86 MYLKmyosin light chain kinase (202555_s_at), score: -0.71 NAAAN-acylethanolamine acid amidase (214765_s_at), score: -0.68 NAP1L3nucleosome assembly protein 1-like 3 (204749_at), score: 0.69 NBEAneurobeachin (221207_s_at), score: -0.69 NEFMneurofilament, medium polypeptide (205113_at), score: -0.8 NFIBnuclear factor I/B (209290_s_at), score: 0.73 NOX4NADPH oxidase 4 (219773_at), score: 0.8 NUDT2nudix (nucleoside diphosphate linked moiety X)-type motif 2 (218609_s_at), score: 0.67 OSBPL1Aoxysterol binding protein-like 1A (209485_s_at), score: -0.67 PARP3poly (ADP-ribose) polymerase family, member 3 (209940_at), score: -0.82 PDLIM3PDZ and LIM domain 3 (209621_s_at), score: -0.74 PHF11PHD finger protein 11 (221816_s_at), score: -0.67 PLCE1phospholipase C, epsilon 1 (205112_at), score: 0.67 PLK2polo-like kinase 2 (Drosophila) (201939_at), score: 0.73 PLXNA2plexin A2 (213030_s_at), score: 0.84 PORCNporcupine homolog (Drosophila) (219483_s_at), score: -0.84 PPAP2Aphosphatidic acid phosphatase type 2A (209147_s_at), score: -0.69 PPP1R13Lprotein phosphatase 1, regulatory (inhibitor) subunit 13 like (218849_s_at), score: 0.75 PRSS2protease, serine, 2 (trypsin 2) (205402_x_at), score: -0.74 PRSS3protease, serine, 3 (213421_x_at), score: -0.78 PTPRZ1protein tyrosine phosphatase, receptor-type, Z polypeptide 1 (204469_at), score: -0.97 RHBDL2rhomboid, veinlet-like 2 (Drosophila) (219489_s_at), score: 0.76 RPP25ribonuclease P/MRP 25kDa subunit (219143_s_at), score: -0.87 RTN1reticulon 1 (203485_at), score: -0.89 SCN3Asodium channel, voltage-gated, type III, alpha subunit (210432_s_at), score: -0.75 SEPT6septin 6 (212414_s_at), score: 0.68 SIGLEC15sialic acid binding Ig-like lectin 15 (215856_at), score: -0.72 SIM2single-minded homolog 2 (Drosophila) (206558_at), score: -0.87 SIX2SIX homeobox 2 (206510_at), score: -0.71 SLC17A9solute carrier family 17, member 9 (219559_at), score: -0.73 SLC24A3solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 (57588_at), score: -0.86 SLC7A5solute carrier family 7 (cationic amino acid transporter, y+ system), member 5 (201195_s_at), score: 0.77 SMAD6SMAD family member 6 (207069_s_at), score: 0.69 SOX17SRY (sex determining region Y)-box 17 (219993_at), score: 0.75 SPP1secreted phosphoprotein 1 (209875_s_at), score: -0.77 STBD1starch binding domain 1 (203986_at), score: -0.73 SYNMsynemin, intermediate filament protein (212730_at), score: -0.71 TBXA2Rthromboxane A2 receptor (336_at), score: -0.81 TEAD3TEA domain family member 3 (209454_s_at), score: -0.72 TIMP3TIMP metallopeptidase inhibitor 3 (201149_s_at), score: -0.76 TRIM34tripartite motif-containing 34 (221044_s_at), score: -0.73 TRPV2transient receptor potential cation channel, subfamily V, member 2 (219282_s_at), score: -0.7 TRY6trypsinogen C (215395_x_at), score: -0.8 TSPYL5TSPY-like 5 (213122_at), score: 0.78 UAP1L1UDP-N-acteylglucosamine pyrophosphorylase 1-like 1 (214755_at), score: -0.74 VAMP8vesicle-associated membrane protein 8 (endobrevin) (202546_at), score: -0.81 ZEB2zinc finger E-box binding homeobox 2 (203603_s_at), score: -0.67 ZFHX4zinc finger homeobox 4 (219779_at), score: 0.85 ZFP36zinc finger protein 36, C3H type, homolog (mouse) (201531_at), score: -0.68 ZFPM2zinc finger protein, multitype 2 (219778_at), score: 0.7
| Id | sample | Experiment | ExpName | Array | Syndrome | Cell.line |
|---|---|---|---|---|---|---|
| E-GEOD-3860-raw-cel-1561690336.cel | 9 | 5 | HGPS | hgu133a | HGPS | AG10750 |
| E-GEOD-3860-raw-cel-1561690231.cel | 4 | 5 | HGPS | hgu133a | HGPS | AG10750 |
| E-GEOD-3860-raw-cel-1561690432.cel | 16 | 5 | HGPS | hgu133a | HGPS | AG10750 |
| E-GEOD-3860-raw-cel-1561690352.cel | 11 | 5 | HGPS | hgu133a | HGPS | AG11498 |
| E-GEOD-3860-raw-cel-1561690272.cel | 7 | 5 | HGPS | hgu133a | HGPS | AG11498 |
| E-GEOD-3860-raw-cel-1561690480.cel | 18 | 5 | HGPS | hgu133a | HGPS | AG11498 |
