Under-expression is coded with green,
over-expression with red color.
biological_process
Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
multicellular organismal process
Any biological process, occurring at the level of a multicellular organism, pertinent to its function.
all
This term is the most general term possible
membrane
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
cellular_component
The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together.
cell
The basic structural and functional unit of all organisms. Includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope.
intrinsic to membrane
Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane.
anchored to membrane
Tethered to a membrane by a covalently attached anchor, such as a lipid moiety, that is embedded in the membrane. When used to describe a protein, indicates that none of the peptide sequence is embedded in the membrane.
membrane part
Any constituent part of a membrane, a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
cell part
Any constituent part of a cell, the basic structural and functional unit of all organisms.
all
This term is the most general term possible
cell part
Any constituent part of a cell, the basic structural and functional unit of all organisms.
membrane part
Any constituent part of a membrane, a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
A1CFAPOBEC1 complementation factor (220951_s_at), score: -0.86 BMP10bone morphogenetic protein 10 (208292_at), score: -0.82 BTNL3butyrophilin-like 3 (217207_s_at), score: -0.86 C7orf28Achromosome 7 open reading frame 28A (201974_s_at), score: -0.89 C8orf60chromosome 8 open reading frame 60 (220712_at), score: -0.85 CA4carbonic anhydrase IV (206209_s_at), score: -0.9 CEACAM5carcinoembryonic antigen-related cell adhesion molecule 5 (201884_at), score: -0.82 CEACAM6carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) (211657_at), score: -0.88 CLDN10claudin 10 (205328_at), score: -0.89 COL11A2collagen, type XI, alpha 2 (216993_s_at), score: -0.89 DESdesmin (216947_at), score: -0.83 DNASE1L3deoxyribonuclease I-like 3 (205554_s_at), score: -0.9 DRD5dopamine receptor D5 (208486_at), score: -0.85 FAM38Bfamily with sequence similarity 38, member B (219602_s_at), score: -0.9 GPR12G protein-coupled receptor 12 (214558_at), score: -0.9 KIR3DX1killer cell immunoglobulin-like receptor, three domains, X1 (216428_x_at), score: -0.91 KLF1Kruppel-like factor 1 (erythroid) (210504_at), score: -0.88 LHX3LIM homeobox 3 (221670_s_at), score: -0.92 LOC100188945cell division cycle associated 4 pseudogene (215109_at), score: -0.9 MBmyoglobin (204179_at), score: -0.88 MFNGMFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase (204153_s_at), score: -0.86 MMRN2multimerin 2 (219091_s_at), score: -0.93 MOBPmyelin-associated oligodendrocyte basic protein (210193_at), score: -0.91 N4BP3Nedd4 binding protein 3 (214775_at), score: -0.9 NRN1neuritin 1 (218625_at), score: -0.93 OR1E2olfactory receptor, family 1, subfamily E, member 2 (208587_s_at), score: -0.93 OR7E24olfactory receptor, family 7, subfamily E, member 24 (215463_at), score: -0.93 PECAM1platelet/endothelial cell adhesion molecule (208982_at), score: -0.97 PGK2phosphoglycerate kinase 2 (217009_at), score: -0.83 PIPOXpipecolic acid oxidase (221605_s_at), score: -0.82 PLUNCpalate, lung and nasal epithelium associated (220542_s_at), score: -0.87 PRSS7protease, serine, 7 (enterokinase) (217269_s_at), score: -1 PYHIN1pyrin and HIN domain family, member 1 (216748_at), score: -0.83 RETret proto-oncogene (205879_x_at), score: -0.83 RP11-35N6.1plasticity related gene 3 (219732_at), score: -0.92 RPGRIP1retinitis pigmentosa GTPase regulator interacting protein 1 (206608_s_at), score: -0.93 S100A14S100 calcium binding protein A14 (218677_at), score: -0.88 SCN10Asodium channel, voltage-gated, type X, alpha subunit (208578_at), score: -0.82 SLC10A1solute carrier family 10 (sodium/bile acid cotransporter family), member 1 (207185_at), score: -0.86 SLC15A1solute carrier family 15 (oligopeptide transporter), member 1 (211349_at), score: -0.87 SLC26A10solute carrier family 26, member 10 (214951_at), score: -0.84 TACR1tachykinin receptor 1 (208048_at), score: -0.93 TBX21T-box 21 (220684_at), score: -0.93 TBX6T-box 6 (207684_at), score: -0.82 TRA@T cell receptor alpha locus (216540_at), score: -0.95
| Id | sample | Experiment | ExpName | Array | Syndrome | Cell.line |
|---|---|---|---|---|---|---|
| ctrl a 08-03.CEL | 1 | 1 | DS-CC | hgu133a | none | DS-CC 1 |
| t21a 08-03.CEL | 4 | 1 | DS-CC | hgu133a | Down | DS-CC 4 |
| E-GEOD-3407-raw-cel-1437949557.cel | 1 | 4 | Cockayne | hgu133a | CS | eGFP |
| t21d 08-03.CEL | 7 | 1 | DS-CC | hgu133a | Down | DS-CC 7 |
| 2Twin.CEL | 2 | 2 | DS-twin | hgu133plus2 | none | DS-twin 2 |
| 46A.CEL | 1 | 3 | DS-mosaic | hgu133plus2 | none | DS-mosaic 1 |
| E-GEOD-4219-raw-cel-1311956358.cel | 10 | 7 | Sph-mono | hgu133plus2 | none | Sph-mon 1 |
| E-TABM-263-raw-cel-1515486011.cel | 19 | 6 | Cycle | hgu133a2 | none | Cycle 1 |
| E-TABM-263-raw-cel-1515485871.cel | 12 | 6 | Cycle | hgu133a2 | none | Cycle 1 |
| E-TABM-263-raw-cel-1515485651.cel | 1 | 6 | Cycle | hgu133a2 | none | Cycle 1 |
