Under-expression is coded with green,
over-expression with red color.
extracellular region
The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
cellular_component
The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together.
proteinaceous extracellular matrix
A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity.
extracellular space
That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid.
extracellular matrix
A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants).
extracellular region part
Any constituent part of the extracellular region, the space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers constituent parts of the host cell environment outside an intracellular parasite.
all
This term is the most general term possible
extracellular region part
Any constituent part of the extracellular region, the space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers constituent parts of the host cell environment outside an intracellular parasite.
molecular_function
Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions.
catalytic activity
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
endopeptidase activity
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain.
peptidase activity
Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid.
peptidase activity, acting on L-amino acid peptides
Catalysis of the hydrolysis of peptide bonds formed between L-amino acids.
hydrolase activity
Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
all
This term is the most general term possible
ACANaggrecan (205679_x_at), score: 0.53 ADAM21ADAM metallopeptidase domain 21 (207665_at), score: 0.46 ADAMTS6ADAM metallopeptidase with thrombospondin type 1 motif, 6 (220866_at), score: -0.46 AFF2AF4/FMR2 family, member 2 (206105_at), score: -0.4 AGBL5ATP/GTP binding protein-like 5 (218480_at), score: 0.49 AHI1Abelson helper integration site 1 (221569_at), score: -0.41 ANXA10annexin A10 (210143_at), score: -0.55 APAF1apoptotic peptidase activating factor 1 (204859_s_at), score: -0.43 APOBEC3Fapolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3F (214995_s_at), score: 0.51 ARL17ADP-ribosylation factor-like 17 (210435_at), score: -0.42 ARMC9armadillo repeat containing 9 (219637_at), score: 0.54 ARNT2aryl-hydrocarbon receptor nuclear translocator 2 (202986_at), score: 0.56 ASPNasporin (219087_at), score: -0.47 ASTN2astrotactin 2 (209693_at), score: 0.57 ATP6V1B2ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2 (201089_at), score: 0.49 B3GNTL1UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1 (213589_s_at), score: 0.54 B9D1B9 protein domain 1 (210534_s_at), score: 0.46 BAALCbrain and acute leukemia, cytoplasmic (218899_s_at), score: -0.39 BAXBCL2-associated X protein (208478_s_at), score: 0.5 BCCIPBRCA2 and CDKN1A interacting protein (218264_at), score: 0.5 C11orf51chromosome 11 open reading frame 51 (204218_at), score: 0.45 C11orf67chromosome 11 open reading frame 67 (221600_s_at), score: 0.52 C12orf52chromosome 12 open reading frame 52 (221777_at), score: 0.46 C17orf39chromosome 17 open reading frame 39 (220058_at), score: 0.58 C19orf54chromosome 19 open reading frame 54 (222052_at), score: 0.5 C1orf9chromosome 1 open reading frame 9 (203429_s_at), score: -0.52 C21orf7chromosome 21 open reading frame 7 (221211_s_at), score: -0.43 C21orf91chromosome 21 open reading frame 91 (220941_s_at), score: 0.45 C2CD2LC2CD2-like (204757_s_at), score: -0.45 C9orf114chromosome 9 open reading frame 114 (218565_at), score: 0.46 CA12carbonic anhydrase XII (203963_at), score: 0.47 CCDC44coiled-coil domain containing 44 (221069_s_at), score: 0.46 CCL11chemokine (C-C motif) ligand 11 (210133_at), score: -0.49 CCNT2cyclin T2 (204645_at), score: -0.41 CD320CD320 molecule (218529_at), score: 0.61 CD55CD55 molecule, decay accelerating factor for complement (Cromer blood group) (201925_s_at), score: -0.54 CD83CD83 molecule (204440_at), score: -0.4 CDCA4cell division cycle associated 4 (218399_s_at), score: -0.4 CDCP1CUB domain containing protein 1 (218451_at), score: -0.49 CDH18cadherin 18, type 2 (206280_at), score: 0.51 CDKL3cyclin-dependent kinase-like 3 (219831_at), score: 0.46 CHRNA6cholinergic receptor, nicotinic, alpha 6 (207568_at), score: -0.4 CLCF1cardiotrophin-like cytokine factor 1 (219500_at), score: -0.47 CLEC3BC-type lectin domain family 3, member B (205200_at), score: -0.67 CLK1CDC-like kinase 1 (214683_s_at), score: -0.49 CLK4CDC-like kinase 4 (210346_s_at), score: -0.47 CLUclusterin (208791_at), score: -0.56 CNNM2cyclin M2 (206818_s_at), score: 0.49 COL14A1collagen, type XIV, alpha 1 (212865_s_at), score: -0.48 COL5A3collagen, type V, alpha 3 (52255_s_at), score: -0.66 COL7A1collagen, type VII, alpha 1 (217312_s_at), score: -0.46 CORO2Bcoronin, actin binding protein, 2B (209789_at), score: -0.51 CPT1Acarnitine palmitoyltransferase 1A (liver) (203633_at), score: 0.49 CRYL1crystallin, lambda 1 (220753_s_at), score: -0.44 CST6cystatin E/M (206595_at), score: -0.62 CTSEcathepsin E (205927_s_at), score: -0.42 CTSKcathepsin K (202450_s_at), score: -0.46 CTSOcathepsin O (203758_at), score: -0.48 CTSScathepsin S (202901_x_at), score: -0.45 CXCL6chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2) (206336_at), score: -0.46 CXorf15chromosome X open reading frame 15 (219969_at), score: -0.4 D4S234EDNA segment on chromosome 4 (unique) 234 expressed sequence (209569_x_at), score: -0.4 DCP2DCP2 decapping enzyme homolog (S. cerevisiae) (212919_at), score: -0.45 DIRAS3DIRAS family, GTP-binding RAS-like 3 (215506_s_at), score: -0.6 DNAJB9DnaJ (Hsp40) homolog, subfamily B, member 9 (202843_at), score: -0.46 DPP4dipeptidyl-peptidase 4 (211478_s_at), score: -0.46 DUS4Ldihydrouridine synthase 4-like (S. cerevisiae) (205761_s_at), score: 0.52 DUSP5dual specificity phosphatase 5 (209457_at), score: -0.49 DUSP6dual specificity phosphatase 6 (208891_at), score: -0.55 EDNRBendothelin receptor type B (204271_s_at), score: -0.44 EGFL6EGF-like-domain, multiple 6 (219454_at), score: -0.41 EMCNendomucin (219436_s_at), score: 0.59 EML1echinoderm microtubule associated protein like 1 (204797_s_at), score: -0.58 EREGepiregulin (205767_at), score: -0.42 ESM1endothelial cell-specific molecule 1 (208394_x_at), score: -0.41 EVI2Aecotropic viral integration site 2A (204774_at), score: 0.48 EVI2Becotropic viral integration site 2B (211742_s_at), score: 0.55 EXOSC5exosome component 5 (218481_at), score: 0.48 FAM29Afamily with sequence similarity 29, member A (218602_s_at), score: -0.45 FAM63Bfamily with sequence similarity 63, member B (214691_x_at), score: -0.4 FAM86Cfamily with sequence similarity 86, member C (220353_at), score: 0.52 FBXO31F-box protein 31 (219785_s_at), score: 0.51 FDXRferredoxin reductase (207813_s_at), score: 0.47 FGD2FYVE, RhoGEF and PH domain containing 2 (215602_at), score: -0.44 FZD4frizzled homolog 4 (Drosophila) (218665_at), score: 0.6 GAAglucosidase, alpha; acid (202812_at), score: -0.51 GALTgalactose-1-phosphate uridylyltransferase (203179_at), score: 0.54 GANgigaxonin (220124_at), score: -0.41 GARNL1GTPase activating Rap/RanGAP domain-like 1 (214855_s_at), score: -0.41 GKglycerol kinase (207387_s_at), score: -0.5 GNPDA1glucosamine-6-phosphate deaminase 1 (202382_s_at), score: 0.45 GPM6Bglycoprotein M6B (209167_at), score: -0.58 GPR177G protein-coupled receptor 177 (221958_s_at), score: -0.53 GPRASP1G protein-coupled receptor associated sorting protein 1 (204793_at), score: 0.67 GPSN2glycoprotein, synaptic 2 (208336_s_at), score: 0.45 GRB14growth factor receptor-bound protein 14 (206204_at), score: -0.39 HGFhepatocyte growth factor (hepapoietin A; scatter factor) (209960_at), score: -0.54 HIPK3homeodomain interacting protein kinase 3 (210148_at), score: -0.41 HOXD1homeobox D1 (205975_s_at), score: -0.4 HSPB2heat shock 27kDa protein 2 (205824_at), score: 0.61 HSPBAP1HSPB (heat shock 27kDa) associated protein 1 (219284_at), score: 0.48 HTR2A5-hydroxytryptamine (serotonin) receptor 2A (207135_at), score: -0.42 IER2immediate early response 2 (202081_at), score: -0.41 IGF2insulin-like growth factor 2 (somatomedin A) (202409_at), score: -0.51 IL13RA2interleukin 13 receptor, alpha 2 (206172_at), score: -0.6 IL33interleukin 33 (209821_at), score: -0.77 KAL1Kallmann syndrome 1 sequence (205206_at), score: -0.51 KCNE4potassium voltage-gated channel, Isk-related family, member 4 (222379_at), score: 0.55 KCTD9potassium channel tetramerisation domain containing 9 (218823_s_at), score: -0.47 KIAA0586KIAA0586 (205631_at), score: 0.47 KIAA1024KIAA1024 (215081_at), score: -0.43 KITv-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog (205051_s_at), score: 0.55 KRT17keratin 17 (212236_x_at), score: -0.42 KRT33Akeratin 33A (208483_x_at), score: -0.57 KRT9keratin 9 (208188_at), score: -0.45 LIG3ligase III, DNA, ATP-dependent (204123_at), score: 0.47 LMAN2Llectin, mannose-binding 2-like (221274_s_at), score: 0.57 LOC388152hypothetical LOC388152 (220602_s_at), score: 0.55 LOC65998hypothetical protein LOC65998 (218641_at), score: -0.39 LRP8low density lipoprotein receptor-related protein 8, apolipoprotein e receptor (205282_at), score: -0.44 MAP7D3MAP7 domain containing 3 (219576_at), score: 0.46 MID1IP1MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish)) (218251_at), score: -0.45 MLPHmelanophilin (218211_s_at), score: 0.6 MMP10matrix metallopeptidase 10 (stromelysin 2) (205680_at), score: -0.44 MMP16matrix metallopeptidase 16 (membrane-inserted) (207012_at), score: -0.42 MPImannose phosphate isomerase (202472_at), score: 0.5 MSTP9macrophage stimulating, pseudogene 9 (213382_at), score: -0.52 NAGPAN-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase (205090_s_at), score: 0.56 NDRG4NDRG family member 4 (209159_s_at), score: 0.47 NDUFA2NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 2, 8kDa (213550_s_at), score: 0.46 NEFLneurofilament, light polypeptide (221805_at), score: -0.64 NFATC2IPnuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein (217526_at), score: -0.55 NOL8nucleolar protein 8 (218244_at), score: 0.53 NR5A2nuclear receptor subfamily 5, group A, member 2 (208343_s_at), score: -0.44 NTHL1nth endonuclease III-like 1 (E. coli) (209731_at), score: 0.55 NTNG1netrin G1 (206713_at), score: -0.43 NUPL1nucleoporin like 1 (204435_at), score: -0.44 OAS12',5'-oligoadenylate synthetase 1, 40/46kDa (205552_s_at), score: -0.41 OLFML2Aolfactomedin-like 2A (213075_at), score: -0.53 OMDosteomodulin (205907_s_at), score: -0.39 OPCMLopioid binding protein/cell adhesion molecule-like (214111_at), score: -0.45 PAFAH1B3platelet-activating factor acetylhydrolase, isoform Ib, gamma subunit 29kDa (203228_at), score: 0.5 PECRperoxisomal trans-2-enoyl-CoA reductase (221142_s_at), score: 0.45 PENKproenkephalin (213791_at), score: -0.44 PET112LPET112-like (yeast) (204300_at), score: 0.51 PHKA1phosphorylase kinase, alpha 1 (muscle) (205450_at), score: -0.43 PHLPPPH domain and leucine rich repeat protein phosphatase (212719_at), score: -0.41 PID1phosphotyrosine interaction domain containing 1 (219093_at), score: -0.41 PIGLphosphatidylinositol glycan anchor biosynthesis, class L (213889_at), score: 0.52 PKIAprotein kinase (cAMP-dependent, catalytic) inhibitor alpha (204612_at), score: -0.53 PLAURplasminogen activator, urokinase receptor (211924_s_at), score: -0.43 PMAIP1phorbol-12-myristate-13-acetate-induced protein 1 (204285_s_at), score: -0.57 PNRC2proline-rich nuclear receptor coactivator 2 (217779_s_at), score: -0.57 POP1processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae) (213449_at), score: 0.5 POU4F1POU class 4 homeobox 1 (206940_s_at), score: -0.4 PRELPproline/arginine-rich end leucine-rich repeat protein (204223_at), score: -0.44 PRKG2protein kinase, cGMP-dependent, type II (207505_at), score: -0.59 PRSS2protease, serine, 2 (trypsin 2) (205402_x_at), score: -0.53 PRSS3protease, serine, 3 (213421_x_at), score: -0.63 PSMB9proteasome (prosome, macropain) subunit, beta type, 9 (large multifunctional peptidase 2) (204279_at), score: 0.58 PTCD1pentatricopeptide repeat domain 1 (218956_s_at), score: 0.47 PTGS1prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) (215813_s_at), score: -0.54 PTGS2prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) (204748_at), score: -0.41 PYCARDPYD and CARD domain containing (221666_s_at), score: 0.49 RAB13RAB13, member RAS oncogene family (202252_at), score: 0.47 RAB8BRAB8B, member RAS oncogene family (219210_s_at), score: 0.57 RARRES1retinoic acid receptor responder (tazarotene induced) 1 (221872_at), score: -0.44 RASA2RAS p21 protein activator 2 (206636_at), score: -0.47 RASSF2Ras association (RalGDS/AF-6) domain family member 2 (203185_at), score: -0.48 RBM39RNA binding motif protein 39 (207941_s_at), score: -0.44 RBM4BRNA binding motif protein 4B (209497_s_at), score: 0.56 RP2retinitis pigmentosa 2 (X-linked recessive) (205191_at), score: -0.47 RPL23ribosomal protein L23 (214744_s_at), score: -0.45 SAT1spermidine/spermine N1-acetyltransferase 1 (213988_s_at), score: -0.54 SERPINB7serpin peptidase inhibitor, clade B (ovalbumin), member 7 (206421_s_at), score: 0.45 SETMARSET domain and mariner transposase fusion gene (206554_x_at), score: 0.56 SFRS12splicing factor, arginine/serine-rich 12 (212721_at), score: -0.47 SLC16A5solute carrier family 16, member 5 (monocarboxylic acid transporter 6) (206600_s_at), score: 0.62 SLC16A6solute carrier family 16, member 6 (monocarboxylic acid transporter 7) (207038_at), score: -0.46 SLC17A7solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7 (204230_s_at), score: -0.41 SLC38A4solute carrier family 38, member 4 (220786_s_at), score: 0.78 SNX13sorting nexin 13 (213292_s_at), score: 0.47 SORT1sortilin 1 (212807_s_at), score: 0.46 SOX9SRY (sex determining region Y)-box 9 (202935_s_at), score: -0.45 SPA17sperm autoantigenic protein 17 (205406_s_at), score: 0.5 SPP1secreted phosphoprotein 1 (209875_s_at), score: 0.46 SPRY4sprouty homolog 4 (Drosophila) (221489_s_at), score: -0.4 STC1stanniocalcin 1 (204597_x_at), score: -0.41 SUOXsulfite oxidase (204067_at), score: 0.56 SYNMsynemin, intermediate filament protein (212730_at), score: 0.59 SYT11synaptotagmin XI (209198_s_at), score: 0.61 TFDP2transcription factor Dp-2 (E2F dimerization partner 2) (203588_s_at), score: 0.6 TGFAtransforming growth factor, alpha (205016_at), score: -0.45 THEM2thioesterase superfamily member 2 (204565_at), score: 0.46 THYN1thymocyte nuclear protein 1 (218491_s_at), score: 0.48 TIMM9translocase of inner mitochondrial membrane 9 homolog (yeast) (218316_at), score: 0.48 TMEM158transmembrane protein 158 (213338_at), score: -0.45 TMOD1tropomodulin 1 (203661_s_at), score: -0.41 TMSB15Athymosin beta 15a (205347_s_at), score: 0.64 TOMM22translocase of outer mitochondrial membrane 22 homolog (yeast) (217960_s_at), score: 0.46 TOXthymocyte selection-associated high mobility group box (204529_s_at), score: 0.5 TPK1thiamin pyrophosphokinase 1 (221218_s_at), score: -0.57 TRIAP1TP53 regulated inhibitor of apoptosis 1 (218403_at), score: 0.53 TRIB2tribbles homolog 2 (Drosophila) (202478_at), score: 0.55 TRPC1transient receptor potential cation channel, subfamily C, member 1 (205802_at), score: -0.41 UCP2uncoupling protein 2 (mitochondrial, proton carrier) (208998_at), score: 1 USE1unconventional SNARE in the ER 1 homolog (S. cerevisiae) (221706_s_at), score: 0.45 VWA5Avon Willebrand factor A domain containing 5A (210102_at), score: 0.55 XPO4exportin 4 (218479_s_at), score: 0.57 YEATS4YEATS domain containing 4 (218911_at), score: -0.4 YIPF1Yip1 domain family, member 1 (214733_s_at), score: 0.47 ZBTB33zinc finger and BTB domain containing 33 (214631_at), score: -0.4 ZDHHC18zinc finger, DHHC-type containing 18 (212860_at), score: -0.4 ZNF219zinc finger protein 219 (219314_s_at), score: -0.52 ZNF22zinc finger protein 22 (KOX 15) (218005_at), score: 0.47 ZNF273zinc finger protein 273 (215239_x_at), score: -0.41 ZNF443zinc finger protein 443 (205928_at), score: -0.4 ZNF749zinc finger protein 749 (215289_at), score: -0.4
| Id | sample | Experiment | ExpName | Array | Syndrome | Cell.line |
|---|---|---|---|---|---|---|
| E-TABM-263-raw-cel-1515485831.cel | 10 | 6 | Cycle | hgu133a2 | none | Cycle 1 |
| E-TABM-263-raw-cel-1515486051.cel | 21 | 6 | Cycle | hgu133a2 | none | Cycle 1 |
| E-TABM-263-raw-cel-1515486011.cel | 19 | 6 | Cycle | hgu133a2 | none | Cycle 1 |
| E-TABM-263-raw-cel-1515486391.cel | 38 | 6 | Cycle | hgu133a2 | none | Cycle 1 |
| E-TABM-263-raw-cel-1515486191.cel | 28 | 6 | Cycle | hgu133a2 | none | Cycle 1 |
