Previous module | Next module Module #18, TG: 4, TC: 2, 31 probes, 31 Entrez genes, 6 conditions

Help | Hide | Top Expression data


Expression data for module #18

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Under-expression is coded with green, over-expression with red color.

Help | Hide | Top The GO tree — Biological processes

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cell adhesion

The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules.

biological_process

Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.

cellular process

Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level.

biological adhesion

The attachment of a cell or organism to a substrate or other organism.

all

This term is the most general term possible

cell adhesion

The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules.

Help | Hide | Top The GO tree — Cellular Components

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extracellular region

The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.

cellular_component

The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together.

extracellular space

That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid.

extracellular region part

Any constituent part of the extracellular region, the space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers constituent parts of the host cell environment outside an intracellular parasite.

all

This term is the most general term possible

extracellular region part

Any constituent part of the extracellular region, the space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers constituent parts of the host cell environment outside an intracellular parasite.

Help | Hide | Top The GO tree — Molecular Function

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Help | Show | Top GO BP test for over-representation

Help | Show | Top GO CC test for over-representation

Help | Show | Top GO MF test for over-representation

Help | Hide | Top KEGG Pathway test for over-representation

Id Pvalue ExpCount Count Size Term
04310 2.600e-03 0.4035 5
110 Wnt signaling pathway

Help | Hide | Top miRNA test for over-representation

No enriched terms

Help | Hide | Top Chromosome test for over-representation

No enriched terms

Help | Hide | Top Genes

Entrez genes

ADH1Balcohol dehydrogenase 1B (class I), beta polypeptide (209612_s_at), score: -0.65 APODapolipoprotein D (201525_at), score: -0.76 ASAP2ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 (206414_s_at), score: -0.68 CCND2cyclin D2 (200953_s_at), score: 0.87 CCRL1chemokine (C-C motif) receptor-like 1 (220351_at), score: -0.75 CDH18cadherin 18, type 2 (206280_at), score: 0.66 COL14A1collagen, type XIV, alpha 1 (212865_s_at), score: -0.75 CTSL1cathepsin L1 (202087_s_at), score: -0.59 DKK2dickkopf homolog 2 (Xenopus laevis) (219908_at), score: -0.91 FLGfilaggrin (215704_at), score: 0.9 FOSv-fos FBJ murine osteosarcoma viral oncogene homolog (209189_at), score: 0.77 HOXC10homeobox C10 (218959_at), score: -0.59 IL1RL1interleukin 1 receptor-like 1 (207526_s_at), score: -1 JAM2junctional adhesion molecule 2 (219213_at), score: 0.74 KIAA1644KIAA1644 (52837_at), score: -0.63 LHFPlipoma HMGIC fusion partner (218656_s_at), score: -0.67 LOXL2lysyl oxidase-like 2 (202997_s_at), score: 0.7 MESTmesoderm specific transcript homolog (mouse) (202016_at), score: 0.6 MYO1Dmyosin ID (212338_at), score: -0.62 NLGN4Xneuroligin 4, X-linked (221933_at), score: 0.74 P4HA1prolyl 4-hydroxylase, alpha polypeptide I (207543_s_at), score: 0.65 POSTNperiostin, osteoblast specific factor (210809_s_at), score: 0.67 PPARDperoxisome proliferator-activated receptor delta (37152_at), score: -0.57 PPLperiplakin (203407_at), score: -0.68 RCAN2regulator of calcineurin 2 (203498_at), score: -0.68 SCRG1scrapie responsive protein 1 (205475_at), score: 0.64 SFRP4secreted frizzled-related protein 4 (204051_s_at), score: 0.6 SOD3superoxide dismutase 3, extracellular (205236_x_at), score: -0.58 SOX11SRY (sex determining region Y)-box 11 (204914_s_at), score: 0.6 WISP2WNT1 inducible signaling pathway protein 2 (205792_at), score: -0.89 WNT2wingless-type MMTV integration site family member 2 (205648_at), score: 0.65

Non-Entrez genes

Unknown, score:

Help | Hide | Top Conditions

Id sample Experiment ExpName Array Syndrome Cell.line
ctrl b 08-03.CEL 2 1 DS-CC hgu133a none DS-CC 2
ctrl c 08-03.CEL 3 1 DS-CC hgu133a none DS-CC 3
t21a 08-03.CEL 4 1 DS-CC hgu133a Down DS-CC 4
t21d 08-03.CEL 7 1 DS-CC hgu133a Down DS-CC 7
t21b 08-03.CEL 5 1 DS-CC hgu133a Down DS-CC 5
t21c 08-03.CEL 6 1 DS-CC hgu133a Down DS-CC 6

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