Under-expression is coded with green,
over-expression with red color.
plasma membrane
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
membrane
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
integral to membrane
Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane.
integral to plasma membrane
Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer.
cellular_component
The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together.
cell
The basic structural and functional unit of all organisms. Includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope.
intrinsic to membrane
Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane.
intrinsic to plasma membrane
Located in the plasma membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane.
membrane part
Any constituent part of a membrane, a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
plasma membrane part
Any constituent part of the plasma membrane, the membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
cell part
Any constituent part of a cell, the basic structural and functional unit of all organisms.
all
This term is the most general term possible
cell part
Any constituent part of a cell, the basic structural and functional unit of all organisms.
membrane part
Any constituent part of a membrane, a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
plasma membrane part
Any constituent part of the plasma membrane, the membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
intrinsic to plasma membrane
Located in the plasma membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane.
integral to plasma membrane
Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer.
ABCA7ATP-binding cassette, sub-family A (ABC1), member 7 (219577_s_at), score: -0.83 ADORA1adenosine A1 receptor (216220_s_at), score: -0.73 ALDH1L1aldehyde dehydrogenase 1 family, member L1 (215798_at), score: -0.74 APPamyloid beta (A4) precursor protein (214953_s_at), score: -0.7 BCAMbasal cell adhesion molecule (Lutheran blood group) (40093_at), score: -0.72 C2orf37chromosome 2 open reading frame 37 (220172_at), score: 0.93 CCDC40coiled-coil domain containing 40 (220592_at), score: -0.83 CD79BCD79b molecule, immunoglobulin-associated beta (205297_s_at), score: -1 CHRNB2cholinergic receptor, nicotinic, beta 2 (neuronal) (206635_at), score: -0.78 CYP3A4cytochrome P450, family 3, subfamily A, polypeptide 4 (205998_x_at), score: -0.72 DMBT1deleted in malignant brain tumors 1 (208250_s_at), score: -0.93 DSPPdentin sialophosphoprotein (221681_s_at), score: -0.78 EMCNendomucin (219436_s_at), score: 0.96 FBP1fructose-1,6-bisphosphatase 1 (209696_at), score: -0.71 FKBP10FK506 binding protein 10, 65 kDa (219249_s_at), score: -0.86 FLRT3fibronectin leucine rich transmembrane protein 3 (219250_s_at), score: 0.85 GBA3glucosidase, beta, acid 3 (cytosolic) (219954_s_at), score: -0.9 GDF9growth differentiation factor 9 (221314_at), score: -0.75 GPR144G protein-coupled receptor 144 (216289_at), score: -0.78 HAB1B1 for mucin (215778_x_at), score: -0.86 INAinternexin neuronal intermediate filament protein, alpha (204465_s_at), score: 0.83 ITGALintegrin, alpha L (antigen CD11A (p180), lymphocyte function-associated antigen 1; alpha polypeptide) (213475_s_at), score: -0.81 JUPjunction plakoglobin (201015_s_at), score: 0.76 LILRB3leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3 (211133_x_at), score: -0.74 LOC149501similar to keratin 8 (216821_at), score: -0.7 MRPS6mitochondrial ribosomal protein S6 (213167_s_at), score: 0.76 MTMR11myotubularin related protein 11 (205076_s_at), score: 0.77 NCOA2nuclear receptor coactivator 2 (205732_s_at), score: 0.75 OLFML2Bolfactomedin-like 2B (213125_at), score: 0.79 OPRL1opiate receptor-like 1 (206564_at), score: -0.72 PKLRpyruvate kinase, liver and RBC (222078_at), score: -0.74 PMS2L2postmeiotic segregation increased 2-like 2 pseudogene (215410_at), score: -0.72 PPP1R13Bprotein phosphatase 1, regulatory (inhibitor) subunit 13B (216347_s_at), score: -0.7 PTPN6protein tyrosine phosphatase, non-receptor type 6 (206687_s_at), score: -0.95 PXNpaxillin (211823_s_at), score: 0.76 RASGRP3RAS guanyl releasing protein 3 (calcium and DAG-regulated) (205801_s_at), score: 0.81 RLN1relaxin 1 (211753_s_at), score: -0.75 SDPRserum deprivation response (phosphatidylserine binding protein) (218711_s_at), score: 0.77 SLC6A11solute carrier family 6 (neurotransmitter transporter, GABA), member 11 (207048_at), score: -0.81 SNTG1syntrophin, gamma 1 (220405_at), score: 0.81 SSX3synovial sarcoma, X breakpoint 3 (211731_x_at), score: -0.81 ST8SIA3ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 (208064_s_at), score: -0.9 STIM1stromal interaction molecule 1 (202764_at), score: 0.8 TMPRSS6transmembrane protease, serine 6 (214955_at), score: -0.77 TMSB4Ythymosin beta 4, Y-linked (206769_at), score: -0.78 TNK1tyrosine kinase, non-receptor, 1 (217149_x_at), score: -0.8 TULP2tubby like protein 2 (206733_at), score: -0.82
| Id | sample | Experiment | ExpName | Array | Syndrome | Cell.line |
|---|---|---|---|---|---|---|
| E-TABM-263-raw-cel-1515485671.cel | 2 | 6 | Cycle | hgu133a2 | none | Cycle 1 |
| E-TABM-263-raw-cel-1515485931.cel | 15 | 6 | Cycle | hgu133a2 | none | Cycle 1 |
| E-TABM-263-raw-cel-1515485951.cel | 16 | 6 | Cycle | hgu133a2 | none | Cycle 1 |
| E-TABM-263-raw-cel-1515485691.cel | 3 | 6 | Cycle | hgu133a2 | none | Cycle 1 |
| E-TABM-263-raw-cel-1515485871.cel | 12 | 6 | Cycle | hgu133a2 | none | Cycle 1 |
| E-TABM-263-raw-cel-1515485711.cel | 4 | 6 | Cycle | hgu133a2 | none | Cycle 1 |
