Under-expression is coded with green,
over-expression with red color.
response to reactive oxygen species
A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a reactive oxygen species stimulus. Reactive oxygen species include singlet oxygen, superoxide, and oxygen free radicals.
response to stress
A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).
response to oxidative stress
A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.
biological_process
Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
response to chemical stimulus
A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chemical stimulus.
response to stimulus
A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus.
all
This term is the most general term possible
response to oxidative stress
A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.
extracellular region
The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
cellular_component
The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together.
extracellular region part
Any constituent part of the extracellular region, the space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers constituent parts of the host cell environment outside an intracellular parasite.
all
This term is the most general term possible
extracellular region part
Any constituent part of the extracellular region, the space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers constituent parts of the host cell environment outside an intracellular parasite.
ABHD2abhydrolase domain containing 2 (63825_at), score: -0.57 ADAMTS12ADAM metallopeptidase with thrombospondin type 1 motif, 12 (221421_s_at), score: -0.83 APOL1apolipoprotein L, 1 (209546_s_at), score: 0.57 ARHGDIARho GDP dissociation inhibitor (GDI) alpha (213606_s_at), score: -0.59 ARPC4actin related protein 2/3 complex, subunit 4, 20kDa (211672_s_at), score: -0.54 B9D1B9 protein domain 1 (210534_s_at), score: 0.65 BAT2D1BAT2 domain containing 1 (211947_s_at), score: -0.6 BCAMbasal cell adhesion molecule (Lutheran blood group) (40093_at), score: 0.58 BCHEbutyrylcholinesterase (205433_at), score: -0.89 BCL2L1BCL2-like 1 (215037_s_at), score: -0.51 BET1Lblocked early in transport 1 homolog (S. cerevisiae)-like (220470_at), score: -0.53 BTRCbeta-transducin repeat containing (216091_s_at), score: -0.58 C10orf10chromosome 10 open reading frame 10 (209182_s_at), score: -0.66 C11orf41chromosome 11 open reading frame 41 (214772_at), score: -0.61 C1orf38chromosome 1 open reading frame 38 (207571_x_at), score: 0.61 C21orf7chromosome 21 open reading frame 7 (221211_s_at), score: -0.66 CA11carbonic anhydrase XI (209726_at), score: 0.6 CASP1caspase 1, apoptosis-related cysteine peptidase (interleukin 1, beta, convertase) (211368_s_at), score: 0.67 CCND1cyclin D1 (208711_s_at), score: -0.54 CFBcomplement factor B (202357_s_at), score: 0.66 CFIcomplement factor I (203854_at), score: 0.96 CMAHcytidine monophosphate-N-acetylneuraminic acid hydroxylase (CMP-N-acetylneuraminate monooxygenase) pseudogene (205518_s_at), score: -0.6 COL1A1collagen, type I, alpha 1 (217430_x_at), score: -0.52 CYTH3cytohesin 3 (206523_at), score: -0.63 CYTIPcytohesin 1 interacting protein (209606_at), score: -0.97 DHX9DEAH (Asp-Glu-Ala-His) box polypeptide 9 (212105_s_at), score: -0.58 DKFZp434H1419hypothetical protein DKFZp434H1419 (214717_at), score: -0.56 DOPEY2dopey family member 2 (205248_at), score: -0.55 DSC2desmocollin 2 (204751_x_at), score: -0.73 ECHDC2enoyl Coenzyme A hydratase domain containing 2 (218552_at), score: 0.7 EDN1endothelin 1 (218995_s_at), score: -0.6 EGFepidermal growth factor (beta-urogastrone) (206254_at), score: 0.8 EIF2S1eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa (201143_s_at), score: -0.54 ELK1ELK1, member of ETS oncogene family (210376_x_at), score: -0.55 ELOVL2elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 2 (213712_at), score: 0.86 ERN1endoplasmic reticulum to nucleus signaling 1 (207061_at), score: -0.51 FAM155Afamily with sequence similarity 155, member A (214825_at), score: -0.58 FGFR3fibroblast growth factor receptor 3 (204379_s_at), score: 0.61 FN1fibronectin 1 (214701_s_at), score: -0.6 FOSv-fos FBJ murine osteosarcoma viral oncogene homolog (209189_at), score: 0.77 GABPAGA binding protein transcription factor, alpha subunit 60kDa (210188_at), score: -0.53 GCH1GTP cyclohydrolase 1 (204224_s_at), score: 0.74 GGT1gamma-glutamyltransferase 1 (209919_x_at), score: 0.64 GPC4glypican 4 (204983_s_at), score: 0.84 GPX3glutathione peroxidase 3 (plasma) (214091_s_at), score: -0.57 HAPLN1hyaluronan and proteoglycan link protein 1 (205523_at), score: -0.66 HHEXhematopoietically expressed homeobox (215933_s_at), score: 0.73 HMOX1heme oxygenase (decycling) 1 (203665_at), score: 0.56 HOXB9homeobox B9 (216417_x_at), score: -1 IL1R1interleukin 1 receptor, type I (202948_at), score: 0.56 IL21Rinterleukin 21 receptor (219971_at), score: -0.52 INAinternexin neuronal intermediate filament protein, alpha (204465_s_at), score: -0.53 INHBEinhibin, beta E (210587_at), score: 0.84 KCNN2potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2 (220116_at), score: -0.75 KCTD20potassium channel tetramerisation domain containing 20 (214849_at), score: -0.58 KIAA0644KIAA0644 gene product (205150_s_at), score: 0.55 L1CAML1 cell adhesion molecule (204584_at), score: 0.56 LATS1LATS, large tumor suppressor, homolog 1 (Drosophila) (219813_at), score: -0.64 LOC730092RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene (216908_x_at), score: -0.57 LOXL2lysyl oxidase-like 2 (202997_s_at), score: -0.55 LRRN3leucine rich repeat neuronal 3 (209841_s_at), score: -0.62 MACROD1MACRO domain containing 1 (219188_s_at), score: 0.65 MALLmal, T-cell differentiation protein-like (209373_at), score: 0.59 MAXMYC associated factor X (210734_x_at), score: -0.58 MAZMYC-associated zinc finger protein (purine-binding transcription factor) (207824_s_at), score: -0.59 ME3malic enzyme 3, NADP(+)-dependent, mitochondrial (204663_at), score: 0.63 MED31mediator complex subunit 31 (219318_x_at), score: -0.54 MEGF9multiple EGF-like-domains 9 (212830_at), score: 0.56 MFAP4microfibrillar-associated protein 4 (212713_at), score: 0.62 MFN2mitofusin 2 (216205_s_at), score: -0.65 MFSD6major facilitator superfamily domain containing 6 (219858_s_at), score: 0.63 MMP14matrix metallopeptidase 14 (membrane-inserted) (202827_s_at), score: -0.55 MRASmuscle RAS oncogene homolog (206538_at), score: -0.52 MRPS6mitochondrial ribosomal protein S6 (213167_s_at), score: -0.74 MTMR1myotubularin related protein 1 (214975_s_at), score: -0.6 NR1H3nuclear receptor subfamily 1, group H, member 3 (203920_at), score: 0.58 NUMA1nuclear mitotic apparatus protein 1 (214251_s_at), score: -0.53 OLFML2Aolfactomedin-like 2A (213075_at), score: 0.55 OLR1oxidized low density lipoprotein (lectin-like) receptor 1 (210004_at), score: -0.72 PACS1phosphofurin acidic cluster sorting protein 1 (220557_s_at), score: -0.58 PAPPA2pappalysin 2 (213332_at), score: 0.75 PDE1Cphosphodiesterase 1C, calmodulin-dependent 70kDa (207303_at), score: -0.76 PKP2plakophilin 2 (207717_s_at), score: 0.58 POMT1protein-O-mannosyltransferase 1 (218476_at), score: 0.59 PPP2R5Dprotein phosphatase 2, regulatory subunit B', delta isoform (211159_s_at), score: -0.58 PSG9pregnancy specific beta-1-glycoprotein 9 (209594_x_at), score: -0.52 PSME4proteasome (prosome, macropain) activator subunit 4 (212220_at), score: -0.57 PTBP1polypyrimidine tract binding protein 1 (212016_s_at), score: -0.53 PTGDSprostaglandin D2 synthase 21kDa (brain) (212187_x_at), score: 0.74 PTGER4prostaglandin E receptor 4 (subtype EP4) (204897_at), score: 0.59 PTMSparathymosin (218045_x_at), score: -0.52 PTPRAprotein tyrosine phosphatase, receptor type, A (213799_s_at), score: -0.67 PTPREprotein tyrosine phosphatase, receptor type, E (221840_at), score: 0.71 PTRFpolymerase I and transcript release factor (208790_s_at), score: -0.59 PXNpaxillin (211823_s_at), score: -0.55 RARRES3retinoic acid receptor responder (tazarotene induced) 3 (204070_at), score: 0.94 RASA3RAS p21 protein activator 3 (206220_s_at), score: -0.57 RELAv-rel reticuloendotheliosis viral oncogene homolog A (avian) (209878_s_at), score: -0.56 SCARB1scavenger receptor class B, member 1 (201819_at), score: 0.56 SCG2secretogranin II (chromogranin C) (204035_at), score: 0.62 SEC14L1SEC14-like 1 (S. cerevisiae) (202082_s_at), score: -0.63 SERPINI1serpin peptidase inhibitor, clade I (neuroserpin), member 1 (205352_at), score: -0.58 SIM2single-minded homolog 2 (Drosophila) (206558_at), score: -0.54 SKIv-ski sarcoma viral oncogene homolog (avian) (204270_at), score: -0.52 SLC26A6solute carrier family 26, member 6 (221572_s_at), score: 0.84 SLC29A1solute carrier family 29 (nucleoside transporters), member 1 (201801_s_at), score: -0.73 SNCAsynuclein, alpha (non A4 component of amyloid precursor) (204466_s_at), score: -0.71 SPPL2Bsignal peptide peptidase-like 2B (215833_s_at), score: -0.62 STAT2signal transducer and activator of transcription 2, 113kDa (205170_at), score: -0.91 SULT1A2sulfotransferase family, cytosolic, 1A, phenol-preferring, member 2 (207122_x_at), score: 0.59 SULT1A3sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3 (210580_x_at), score: 0.67 SYT1synaptotagmin I (203999_at), score: 0.59 TANC2tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 (208425_s_at), score: -0.81 TAPBPLTAP binding protein-like (218746_at), score: 0.77 TEKTEK tyrosine kinase, endothelial (206702_at), score: -0.55 TGFBR1transforming growth factor, beta receptor 1 (206943_at), score: -0.62 TLR3toll-like receptor 3 (206271_at), score: 0.57 TNFRSF14tumor necrosis factor receptor superfamily, member 14 (herpesvirus entry mediator) (209354_at), score: 0.6 TOM1target of myb1 (chicken) (202807_s_at), score: 0.58 TOM1L2target of myb1-like 2 (chicken) (214840_at), score: -0.83 TOP3Atopoisomerase (DNA) III alpha (214300_s_at), score: -0.6 TRAF1TNF receptor-associated factor 1 (205599_at), score: -0.56 ZFP36L2zinc finger protein 36, C3H type-like 2 (201367_s_at), score: -0.53 ZNF467zinc finger protein 467 (214746_s_at), score: 0.62 ZNF688zinc finger protein 688 (213527_s_at), score: 0.62 ZNF711zinc finger protein 711 (207781_s_at), score: 0.59
| Id | sample | Experiment | ExpName | Array | Syndrome | Cell.line |
|---|---|---|---|---|---|---|
| 47C.CEL | 5 | 3 | DS-mosaic | hgu133plus2 | Down mosaic | DS-mosaic 5 |
| 47B.CEL | 4 | 3 | DS-mosaic | hgu133plus2 | Down mosaic | DS-mosaic 4 |
| 46B.CEL | 2 | 3 | DS-mosaic | hgu133plus2 | none | DS-mosaic 2 |
