Under-expression is coded with green,
over-expression with red color.
plasma membrane
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
membrane
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
integral to membrane
Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane.
integral to plasma membrane
Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer.
cellular_component
The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together.
cell
The basic structural and functional unit of all organisms. Includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope.
intrinsic to membrane
Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane.
intrinsic to plasma membrane
Located in the plasma membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane.
membrane part
Any constituent part of a membrane, a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
plasma membrane part
Any constituent part of the plasma membrane, the membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
cell part
Any constituent part of a cell, the basic structural and functional unit of all organisms.
all
This term is the most general term possible
cell part
Any constituent part of a cell, the basic structural and functional unit of all organisms.
membrane part
Any constituent part of a membrane, a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
plasma membrane part
Any constituent part of the plasma membrane, the membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
intrinsic to plasma membrane
Located in the plasma membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane.
integral to plasma membrane
Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer.
ABCA7ATP-binding cassette, sub-family A (ABC1), member 7 (219577_s_at), score: 0.77 ABCC9ATP-binding cassette, sub-family C (CFTR/MRP), member 9 (208561_at), score: -0.67 AGTangiotensinogen (serpin peptidase inhibitor, clade A, member 8) (202834_at), score: 0.64 APPamyloid beta (A4) precursor protein (214953_s_at), score: 0.61 ASPHD1aspartate beta-hydroxylase domain containing 1 (214993_at), score: 0.74 ATN1atrophin 1 (40489_at), score: -0.58 B3GAT3beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I) (203452_at), score: -0.62 BAP1BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase) (201419_at), score: -0.6 BCAMbasal cell adhesion molecule (Lutheran blood group) (40093_at), score: 0.64 C11orf30chromosome 11 open reading frame 30 (219012_s_at), score: -0.64 C19orf61chromosome 19 open reading frame 61 (221335_x_at), score: -0.59 C1orf69chromosome 1 open reading frame 69 (215490_at), score: 0.54 C2orf37chromosome 2 open reading frame 37 (220172_at), score: -0.59 C7orf58chromosome 7 open reading frame 58 (220032_at), score: -0.64 CATSPER2cation channel, sperm associated 2 (217588_at), score: 0.54 CCDC33coiled-coil domain containing 33 (220908_at), score: 0.64 CCDC40coiled-coil domain containing 40 (220592_at), score: 0.53 CD79BCD79b molecule, immunoglobulin-associated beta (205297_s_at), score: 0.75 CEP97centrosomal protein 97kDa (219886_at), score: -0.62 CHRNB2cholinergic receptor, nicotinic, beta 2 (neuronal) (206635_at), score: 0.55 CNNM1cyclin M1 (220166_at), score: 0.58 COPG2coatomer protein complex, subunit gamma 2 (213486_at), score: 0.56 CORO2Acoronin, actin binding protein, 2A (205538_at), score: -0.7 DHRS11dehydrogenase/reductase (SDR family) member 11 (218756_s_at), score: -0.73 DMBT1deleted in malignant brain tumors 1 (208250_s_at), score: 0.72 DMC1DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous recombination (yeast) (208382_s_at), score: -0.58 DTNBdystrobrevin, beta (215295_at), score: 0.6 EMCNendomucin (219436_s_at), score: -0.68 EPORerythropoietin receptor (215054_at), score: -0.79 ETNK2ethanolamine kinase 2 (219268_at), score: 0.54 ETV7ets variant 7 (221680_s_at), score: 0.67 EVI2Becotropic viral integration site 2B (211742_s_at), score: -0.63 FAM105Afamily with sequence similarity 105, member A (219694_at), score: -0.75 FBP1fructose-1,6-bisphosphatase 1 (209696_at), score: 0.82 FKBP10FK506 binding protein 10, 65 kDa (219249_s_at), score: 0.71 FKRPfukutin related protein (219853_at), score: -0.63 FLJ21075hypothetical protein FLJ21075 (221172_at), score: 0.62 FLRT3fibronectin leucine rich transmembrane protein 3 (219250_s_at), score: -0.65 GBA3glucosidase, beta, acid 3 (cytosolic) (219954_s_at), score: 1 GCHFRGTP cyclohydrolase I feedback regulator (204867_at), score: 0.59 GDF9growth differentiation factor 9 (221314_at), score: 0.59 GIPC2GIPC PDZ domain containing family, member 2 (219970_at), score: -0.69 GPR144G protein-coupled receptor 144 (216289_at), score: 0.63 GPR32G protein-coupled receptor 32 (221469_at), score: 0.69 HAB1B1 for mucin (215778_x_at), score: 0.69 HAMPhepcidin antimicrobial peptide (220491_at), score: 0.66 HGFhepatocyte growth factor (hepapoietin A; scatter factor) (209960_at), score: -0.61 HISPPD2Ahistidine acid phosphatase domain containing 2A (204578_at), score: -0.61 HIST1H2BChistone cluster 1, H2bc (214455_at), score: -0.59 HIST1H4Ghistone cluster 1, H4g (208551_at), score: 0.71 HMGA1high mobility group AT-hook 1 (210457_x_at), score: -0.64 HOXA6homeobox A6 (208557_at), score: 0.59 HSPA4Lheat shock 70kDa protein 4-like (205543_at), score: -0.76 HUNKhormonally up-regulated Neu-associated kinase (219535_at), score: 0.56 IL12Binterleukin 12B (natural killer cell stimulatory factor 2, cytotoxic lymphocyte maturation factor 2, p40) (207901_at), score: -0.62 INAinternexin neuronal intermediate filament protein, alpha (204465_s_at), score: -0.59 IRF2interferon regulatory factor 2 (203275_at), score: -0.61 ITGALintegrin, alpha L (antigen CD11A (p180), lymphocyte function-associated antigen 1; alpha polypeptide) (213475_s_at), score: 0.63 ITM2Aintegral membrane protein 2A (202746_at), score: -0.64 JUPjunction plakoglobin (201015_s_at), score: -0.58 KATNB1katanin p80 (WD repeat containing) subunit B 1 (203162_s_at), score: 0.58 KCTD15potassium channel tetramerisation domain containing 15 (218553_s_at), score: 0.65 KIF26Bkinesin family member 26B (220002_at), score: 0.53 LILRB3leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3 (211133_x_at), score: 0.55 LOC100128414similar to fibrinogen silencer binding protein (220549_at), score: -0.6 LOC149501similar to keratin 8 (216821_at), score: 0.56 LOC731884similar to programmed cell death 6 interacting protein (217520_x_at), score: -0.58 LPHN1latrophilin 1 (203488_at), score: 0.63 LRP2low density lipoprotein-related protein 2 (205710_at), score: -0.65 MAP2microtubule-associated protein 2 (210015_s_at), score: 0.56 MAP3K6mitogen-activated protein kinase kinase kinase 6 (219278_at), score: -0.58 MAPRE3microtubule-associated protein, RP/EB family, member 3 (203842_s_at), score: 0.67 MEOX1mesenchyme homeobox 1 (205619_s_at), score: 0.62 MFNGMFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase (204153_s_at), score: 0.63 MMP17matrix metallopeptidase 17 (membrane-inserted) (206234_s_at), score: 0.56 MOBPmyelin-associated oligodendrocyte basic protein (210193_at), score: 0.68 MOCS1molybdenum cofactor synthesis 1 (211673_s_at), score: 0.55 MOGmyelin oligodendrocyte glycoprotein (214650_x_at), score: 0.61 MRPS6mitochondrial ribosomal protein S6 (213167_s_at), score: -0.68 MTMR11myotubularin related protein 11 (205076_s_at), score: -0.76 MUC3Bmucin 3B, cell surface associated (214898_x_at), score: 0.55 NDPNorrie disease (pseudoglioma) (206022_at), score: -0.72 NF1neurofibromin 1 (211094_s_at), score: -0.67 NFYCnuclear transcription factor Y, gamma (202215_s_at), score: -0.62 NHLH2nescient helix loop helix 2 (215228_at), score: -0.59 NUPL2nucleoporin like 2 (204003_s_at), score: 0.69 NXPH3neurexophilin 3 (221991_at), score: 0.58 OLFML2Bolfactomedin-like 2B (213125_at), score: -0.7 OPRL1opiate receptor-like 1 (206564_at), score: 0.57 PDE5Aphosphodiesterase 5A, cGMP-specific (206757_at), score: -0.7 PHF2PHD finger protein 2 (212726_at), score: -0.66 PHTF1putative homeodomain transcription factor 1 (215285_s_at), score: -0.66 PLXNB3plexin B3 (205957_at), score: 0.58 PMLpromyelocytic leukemia (206503_x_at), score: -0.64 PNMAL1PNMA-like 1 (218824_at), score: -0.75 PPP1R13Bprotein phosphatase 1, regulatory (inhibitor) subunit 13B (216347_s_at), score: 0.57 PPP1R9Aprotein phosphatase 1, regulatory (inhibitor) subunit 9A (221088_s_at), score: -0.68 PRLHprolactin releasing hormone (221443_x_at), score: 0.62 PTPN6protein tyrosine phosphatase, non-receptor type 6 (206687_s_at), score: 0.79 PUS3pseudouridylate synthase 3 (221277_s_at), score: 0.55 PXNpaxillin (211823_s_at), score: -0.66 REG3Aregenerating islet-derived 3 alpha (205815_at), score: 0.66 RP4-691N24.1ninein-like (207705_s_at), score: -0.7 RPRD2regulation of nuclear pre-mRNA domain containing 2 (212553_at), score: -0.63 SASH3SAM and SH3 domain containing 3 (204923_at), score: 0.58 SCAMP4secretory carrier membrane protein 4 (213244_at), score: -0.59 SDPRserum deprivation response (phosphatidylserine binding protein) (218711_s_at), score: -0.6 SEC61A2Sec61 alpha 2 subunit (S. cerevisiae) (219499_at), score: -0.71 SENP7SUMO1/sentrin specific peptidase 7 (220735_s_at), score: -0.64 SLC30A4solute carrier family 30 (zinc transporter), member 4 (207362_at), score: -0.62 SLC3A1solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1 (205799_s_at), score: 0.55 SLC5A5solute carrier family 5 (sodium iodide symporter), member 5 (211123_at), score: 0.55 SLC6A11solute carrier family 6 (neurotransmitter transporter, GABA), member 11 (207048_at), score: 0.62 SNTG1syntrophin, gamma 1 (220405_at), score: -0.76 SPATA1spermatogenesis associated 1 (221057_at), score: 0.68 ST8SIA3ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 (208064_s_at), score: 0.54 TATtyrosine aminotransferase (206916_x_at), score: -0.67 TGFBR2transforming growth factor, beta receptor II (70/80kDa) (207334_s_at), score: -0.58 TGM4transglutaminase 4 (prostate) (217566_s_at), score: 0.71 TMPRSS6transmembrane protease, serine 6 (214955_at), score: 0.65 TSPAN15tetraspanin 15 (218693_at), score: 0.62 TTC33tetratricopeptide repeat domain 33 (219421_at), score: -0.6 TULP2tubby like protein 2 (206733_at), score: 0.6 VEGFBvascular endothelial growth factor B (203683_s_at), score: -0.6 ZBTB33zinc finger and BTB domain containing 33 (214631_at), score: -0.66 ZNF192zinc finger protein 192 (206579_at), score: -0.79
| Id | sample | Experiment | ExpName | Array | Syndrome | Cell.line |
|---|---|---|---|---|---|---|
| E-TABM-263-raw-cel-1515485711.cel | 4 | 6 | Cycle | hgu133a2 | none | Cycle 1 |
| E-TABM-263-raw-cel-1515485691.cel | 3 | 6 | Cycle | hgu133a2 | none | Cycle 1 |
| E-TABM-263-raw-cel-1515485671.cel | 2 | 6 | Cycle | hgu133a2 | none | Cycle 1 |
