Under-expression is coded with green,
over-expression with red color.
multicellular organismal development
The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult).
tissue development
The process whose specific outcome is the progression of a tissue over time, from its formation to the mature structure.
ectoderm development
The process whose specific outcome is the progression of the ectoderm over time, from its formation to the mature structure. In animal embryos, the ectoderm is the outer germ layer of the embryo, formed during gastrulation.
biological_process
Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
epidermis development
The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species.
multicellular organismal process
Any biological process, occurring at the level of a multicellular organism, pertinent to its function.
developmental process
A biological process whose specific outcome is the progression of an integrated living unit: an anatomical structure (which may be a subcellular structure, cell, tissue, or organ), or organism over time from an initial condition to a later condition.
organ development
Development of a tissue or tissues that work together to perform a specific function or functions. Development pertains to the process whose specific outcome is the progression of a structure over time, from its formation to the mature structure. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions.
system development
The process whose specific outcome is the progression of an organismal system over time, from its formation to the mature structure. A system is a regularly interacting or interdependent group of organs or tissues that work together to carry out a given biological process.
anatomical structure development
The biological process whose specific outcome is the progression of an anatomical structure from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure, whatever form that may be including its natural destruction. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome.
all
This term is the most general term possible
multicellular organismal development
The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult).
system development
The process whose specific outcome is the progression of an organismal system over time, from its formation to the mature structure. A system is a regularly interacting or interdependent group of organs or tissues that work together to carry out a given biological process.
organ development
Development of a tissue or tissues that work together to perform a specific function or functions. Development pertains to the process whose specific outcome is the progression of a structure over time, from its formation to the mature structure. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions.
tissue development
The process whose specific outcome is the progression of a tissue over time, from its formation to the mature structure.
epidermis development
The process whose specific outcome is the progression of the epidermis over time, from its formation to the mature structure. The epidermis is the outer epithelial layer of a plant or animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species.
plasma membrane
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
membrane
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
extracellular region
The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
cellular_component
The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together.
extracellular space
That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid.
cell
The basic structural and functional unit of all organisms. Includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope.
extracellular region part
Any constituent part of the extracellular region, the space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers constituent parts of the host cell environment outside an intracellular parasite.
cell part
Any constituent part of a cell, the basic structural and functional unit of all organisms.
all
This term is the most general term possible
extracellular region part
Any constituent part of the extracellular region, the space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers constituent parts of the host cell environment outside an intracellular parasite.
cell part
Any constituent part of a cell, the basic structural and functional unit of all organisms.
| Id | Pvalue | ExpCount | Count | Size | Term |
|---|---|---|---|---|---|
| 04080 | 1.382e-03 | 1.127 | 8 | 83 | Neuroactive ligand-receptor interaction |
ABHD5abhydrolase domain containing 5 (218739_at), score: 0.62 ACTR3BARP3 actin-related protein 3 homolog B (yeast) (218868_at), score: 0.69 ADAM19ADAM metallopeptidase domain 19 (meltrin beta) (209765_at), score: 0.69 ADORA2Badenosine A2b receptor (205891_at), score: -0.76 AHI1Abelson helper integration site 1 (221569_at), score: 0.88 AIM1absent in melanoma 1 (212543_at), score: -0.77 AJAP1adherens junctions associated protein 1 (206460_at), score: 0.69 ALDH3A2aldehyde dehydrogenase 3 family, member A2 (202053_s_at), score: -0.69 ANXA10annexin A10 (210143_at), score: 0.86 ARL4CADP-ribosylation factor-like 4C (202207_at), score: -0.69 ARMC9armadillo repeat containing 9 (219637_at), score: -0.7 ARNT2aryl-hydrocarbon receptor nuclear translocator 2 (202986_at), score: -0.7 BMP6bone morphogenetic protein 6 (206176_at), score: 1 C14orf45chromosome 14 open reading frame 45 (220173_at), score: 0.73 C2CD2C2 calcium-dependent domain containing 2 (212875_s_at), score: 0.76 C2CD2LC2CD2-like (204757_s_at), score: 0.68 C5orf23chromosome 5 open reading frame 23 (219054_at), score: 0.66 CALB2calbindin 2 (205428_s_at), score: 0.72 CCDC28Acoiled-coil domain containing 28A (209479_at), score: -0.74 CD55CD55 molecule, decay accelerating factor for complement (Cromer blood group) (201925_s_at), score: 0.79 CDCP1CUB domain containing protein 1 (218451_at), score: 0.72 CEP68centrosomal protein 68kDa (212677_s_at), score: -0.7 COL5A3collagen, type V, alpha 3 (52255_s_at), score: 0.63 CST6cystatin E/M (206595_at), score: 0.72 CXCL6chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2) (206336_at), score: 0.77 DENND5BDENN/MADD domain containing 5B (215058_at), score: 0.67 DEPDC6DEP domain containing 6 (218858_at), score: -0.74 DIRAS3DIRAS family, GTP-binding RAS-like 3 (215506_s_at), score: 0.89 DNAJB9DnaJ (Hsp40) homolog, subfamily B, member 9 (202843_at), score: 0.92 DUSP4dual specificity phosphatase 4 (204014_at), score: 0.7 DZIP3DAZ interacting protein 3, zinc finger (213186_at), score: -0.72 EDEM1ER degradation enhancer, mannosidase alpha-like 1 (203279_at), score: 0.62 ESM1endothelial cell-specific molecule 1 (208394_x_at), score: 0.92 ESRRAestrogen-related receptor alpha (1487_at), score: 0.75 FAM155Afamily with sequence similarity 155, member A (214825_at), score: 0.65 FBXO31F-box protein 31 (219785_s_at), score: -0.69 FERMT1fermitin family homolog 1 (Drosophila) (218796_at), score: 0.89 FGF7fibroblast growth factor 7 (keratinocyte growth factor) (205782_at), score: 0.68 FICDFIC domain containing (219910_at), score: 0.68 FNBP1formin binding protein 1 (212288_at), score: -0.74 GKglycerol kinase (207387_s_at), score: 0.94 GK3Pglycerol kinase 3 pseudogene (215966_x_at), score: 0.96 GPR177G protein-coupled receptor 177 (221958_s_at), score: 0.74 GPR183G protein-coupled receptor 183 (205419_at), score: 0.66 GRB14growth factor receptor-bound protein 14 (206204_at), score: 0.88 GTF2A1Lgeneral transcription factor IIA, 1-like (213413_at), score: -0.76 HDGFhepatoma-derived growth factor (high-mobility group protein 1-like) (200896_x_at), score: -0.68 HOMER2homer homolog 2 (Drosophila) (217080_s_at), score: 0.66 HTR2A5-hydroxytryptamine (serotonin) receptor 2A (207135_at), score: 0.86 IL11interleukin 11 (206924_at), score: 0.76 IL13RA2interleukin 13 receptor, alpha 2 (206172_at), score: 0.76 IL33interleukin 33 (209821_at), score: 0.97 KAL1Kallmann syndrome 1 sequence (205206_at), score: 0.87 KCNG1potassium voltage-gated channel, subfamily G, member 1 (214595_at), score: 0.69 LRP8low density lipoprotein receptor-related protein 8, apolipoprotein e receptor (205282_at), score: 0.75 MBOAT2membrane bound O-acyltransferase domain containing 2 (213288_at), score: 0.63 MMP10matrix metallopeptidase 10 (stromelysin 2) (205680_at), score: 0.87 MMP16matrix metallopeptidase 16 (membrane-inserted) (207012_at), score: 0.67 MREGmelanoregulin (219648_at), score: 0.71 MTAPmethylthioadenosine phosphorylase (211363_s_at), score: 0.65 NCALDneurocalcin delta (211685_s_at), score: 0.9 NEFLneurofilament, light polypeptide (221805_at), score: 0.68 NEFMneurofilament, medium polypeptide (205113_at), score: 0.75 NOX4NADPH oxidase 4 (219773_at), score: 0.69 NPnucleoside phosphorylase (201695_s_at), score: 0.66 NPTX1neuronal pentraxin I (204684_at), score: 0.75 NTMneurotrimin (222020_s_at), score: 0.68 OPCMLopioid binding protein/cell adhesion molecule-like (214111_at), score: 0.73 P2RX5purinergic receptor P2X, ligand-gated ion channel, 5 (210448_s_at), score: 0.76 PCDH9protocadherin 9 (219737_s_at), score: 0.85 PIGHphosphatidylinositol glycan anchor biosynthesis, class H (209625_at), score: 0.62 PIGLphosphatidylinositol glycan anchor biosynthesis, class L (213889_at), score: -0.73 PLAURplasminogen activator, urokinase receptor (211924_s_at), score: 0.64 PRSS1protease, serine, 1 (trypsin 1) (216470_x_at), score: 0.7 PRSS2protease, serine, 2 (trypsin 2) (205402_x_at), score: 0.69 PRSS3protease, serine, 3 (207463_x_at), score: 0.79 PSD4pleckstrin and Sec7 domain containing 4 (203317_at), score: 0.63 PTGS1prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) (215813_s_at), score: 0.63 PTGS2prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) (204748_at), score: 0.74 PTHLHparathyroid hormone-like hormone (211756_at), score: 0.92 PTPRBprotein tyrosine phosphatase, receptor type, B (205846_at), score: 0.77 RFX5regulatory factor X, 5 (influences HLA class II expression) (202963_at), score: -0.85 RNF44ring finger protein 44 (203286_at), score: -0.75 RPL23ribosomal protein L23 (214744_s_at), score: 0.65 S1PR1sphingosine-1-phosphate receptor 1 (204642_at), score: 0.63 SLC38A4solute carrier family 38, member 4 (220786_s_at), score: -0.76 SLC4A7solute carrier family 4, sodium bicarbonate cotransporter, member 7 (209884_s_at), score: 0.71 SLMO2slowmo homolog 2 (Drosophila) (217851_s_at), score: 0.66 SMAD3SMAD family member 3 (218284_at), score: -0.77 SPA17sperm autoantigenic protein 17 (205406_s_at), score: -0.7 SSTR1somatostatin receptor 1 (208482_at), score: 0.69 TFDP2transcription factor Dp-2 (E2F dimerization partner 2) (203588_s_at), score: -0.9 TGDSTDP-glucose 4,6-dehydratase (208249_s_at), score: 0.65 TGFAtransforming growth factor, alpha (205016_at), score: 0.83 THYN1thymocyte nuclear protein 1 (218491_s_at), score: -0.7 TMEM2transmembrane protein 2 (218113_at), score: 0.78 TP53tumor protein p53 (201746_at), score: -0.76 TSPAN13tetraspanin 13 (217979_at), score: 0.63 UCP2uncoupling protein 2 (mitochondrial, proton carrier) (208998_at), score: -0.76 VWA5Avon Willebrand factor A domain containing 5A (210102_at), score: -0.7 WDR6WD repeat domain 6 (217734_s_at), score: -0.7 XYLT1xylosyltransferase I (213725_x_at), score: 0.66 ZFYVE16zinc finger, FYVE domain containing 16 (203651_at), score: 0.63
| Id | sample | Experiment | ExpName | Array | Syndrome | Cell.line |
|---|---|---|---|---|---|---|
| E-TABM-263-raw-cel-1515486391.cel | 38 | 6 | Cycle | hgu133a2 | none | Cycle 1 |
| E-TABM-263-raw-cel-1515486191.cel | 28 | 6 | Cycle | hgu133a2 | none | Cycle 1 |
| E-TABM-263-raw-cel-1515485831.cel | 10 | 6 | Cycle | hgu133a2 | none | Cycle 1 |
| E-TABM-263-raw-cel-1515486011.cel | 19 | 6 | Cycle | hgu133a2 | none | Cycle 1 |
| E-TABM-263-raw-cel-1515486051.cel | 21 | 6 | Cycle | hgu133a2 | none | Cycle 1 |
| E-TABM-263-raw-cel-1515486271.cel | 32 | 6 | Cycle | hgu133a2 | none | Cycle 1 |
| E-GEOD-3407-raw-cel-1437949704.cel | 4 | 4 | Cockayne | hgu133a | CS | eGFP |
| E-TABM-263-raw-cel-1515486291.cel | 33 | 6 | Cycle | hgu133a2 | none | Cycle 1 |
| E-TABM-263-raw-cel-1515486311.cel | 34 | 6 | Cycle | hgu133a2 | none | Cycle 1 |
| E-TABM-263-raw-cel-1515485671.cel | 2 | 6 | Cycle | hgu133a2 | none | Cycle 1 |
| E-TABM-263-raw-cel-1515485851.cel | 11 | 6 | Cycle | hgu133a2 | none | Cycle 1 |
| E-TABM-263-raw-cel-1515485771.cel | 7 | 6 | Cycle | hgu133a2 | none | Cycle 1 |
| E-GEOD-3860-raw-cel-1561690256.cel | 6 | 5 | HGPS | hgu133a | none | GMO8398C |
| E-GEOD-3860-raw-cel-1561690199.cel | 1 | 5 | HGPS | hgu133a | none | GM0316B |
| E-TABM-263-raw-cel-1515486351.cel | 36 | 6 | Cycle | hgu133a2 | none | Cycle 1 |
| E-TABM-263-raw-cel-1515486371.cel | 37 | 6 | Cycle | hgu133a2 | none | Cycle 1 |
| E-TABM-263-raw-cel-1515485891.cel | 13 | 6 | Cycle | hgu133a2 | none | Cycle 1 |
| E-TABM-263-raw-cel-1515485811.cel | 9 | 6 | Cycle | hgu133a2 | none | Cycle 1 |
