Under-expression is coded with green,
over-expression with red color.
biological_process
Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
response to stimulus
A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus.
all
This term is the most general term possible
plasma membrane
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
membrane
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
extracellular region
The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
cellular_component
The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together.
cell
The basic structural and functional unit of all organisms. Includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope.
intrinsic to membrane
Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane.
membrane part
Any constituent part of a membrane, a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
cell part
Any constituent part of a cell, the basic structural and functional unit of all organisms.
all
This term is the most general term possible
cell part
Any constituent part of a cell, the basic structural and functional unit of all organisms.
membrane part
Any constituent part of a membrane, a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
ABCA7ATP-binding cassette, sub-family A (ABC1), member 7 (219577_s_at), score: 0.96 ADAMTS7ADAM metallopeptidase with thrombospondin type 1 motif, 7 (220705_s_at), score: 0.69 ADORA1adenosine A1 receptor (216220_s_at), score: 0.82 ADRA1Dadrenergic, alpha-1D-, receptor (210961_s_at), score: 0.75 ALDH1L1aldehyde dehydrogenase 1 family, member L1 (215798_at), score: 0.67 ALDH3A1aldehyde dehydrogenase 3 family, memberA1 (205623_at), score: 0.6 ALPPL2alkaline phosphatase, placental-like 2 (216377_x_at), score: 0.75 ANKRD46ankyrin repeat domain 46 (212731_at), score: -0.68 APOC4apolipoprotein C-IV (206738_at), score: 0.62 APOL1apolipoprotein L, 1 (209546_s_at), score: 0.58 APPamyloid beta (A4) precursor protein (214953_s_at), score: 0.85 ASPHD1aspartate beta-hydroxylase domain containing 1 (214993_at), score: 0.88 ATF7IP2activating transcription factor 7 interacting protein 2 (219870_at), score: 0.52 ATHL1ATH1, acid trehalase-like 1 (yeast) (219359_at), score: 0.62 ATMataxia telangiectasia mutated (210858_x_at), score: 0.52 ATP2C2ATPase, Ca++ transporting, type 2C, member 2 (214798_at), score: 0.52 ATP6V0E1ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1 (214244_s_at), score: 0.52 BCAMbasal cell adhesion molecule (Lutheran blood group) (40093_at), score: 0.76 BEST1bestrophin 1 (207671_s_at), score: 0.7 BRAFv-raf murine sarcoma viral oncogene homolog B1 (206044_s_at), score: -0.76 BRS3bombesin-like receptor 3 (207369_at), score: 0.56 C10orf84chromosome 10 open reading frame 84 (218390_s_at), score: -0.64 C1orf69chromosome 1 open reading frame 69 (215490_at), score: 0.66 C2orf37chromosome 2 open reading frame 37 (220172_at), score: -0.64 C2orf72chromosome 2 open reading frame 72 (213143_at), score: 0.58 C4Acomplement component 4A (Rodgers blood group) (214428_x_at), score: 0.74 C7orf28Achromosome 7 open reading frame 28A (201974_s_at), score: 0.55 C7orf58chromosome 7 open reading frame 58 (220032_at), score: -0.62 CALML4calmodulin-like 4 (64408_s_at), score: 0.59 CATSPER2cation channel, sperm associated 2 (217588_at), score: 0.66 CC2D1Acoiled-coil and C2 domain containing 1A (58994_at), score: 0.65 CCDC33coiled-coil domain containing 33 (220908_at), score: 0.83 CCDC40coiled-coil domain containing 40 (220592_at), score: 0.92 CCDC9coiled-coil domain containing 9 (206257_at), score: 0.54 CCDC94coiled-coil domain containing 94 (204335_at), score: 0.57 CCR1chemokine (C-C motif) receptor 1 (205099_s_at), score: 0.52 CD79BCD79b molecule, immunoglobulin-associated beta (205297_s_at), score: 0.85 CD80CD80 molecule (207176_s_at), score: -0.69 CFHR2complement factor H-related 2 (206910_x_at), score: 0.54 CHMLchoroideremia-like (Rab escort protein 2) (206079_at), score: -0.59 CHRNB2cholinergic receptor, nicotinic, beta 2 (neuronal) (206635_at), score: 0.73 CNNM3cyclin M3 (220739_s_at), score: -0.7 COL11A2collagen, type XI, alpha 2 (216993_s_at), score: 0.65 CTAGE1cutaneous T-cell lymphoma-associated antigen 1 (220957_at), score: -0.67 CXorf21chromosome X open reading frame 21 (220252_x_at), score: 0.52 CYBBcytochrome b-245, beta polypeptide (203923_s_at), score: 0.7 CYorf14chromosome Y open reading frame 14 (207063_at), score: -0.65 CYTH4cytohesin 4 (219183_s_at), score: 0.69 DCAKDdephospho-CoA kinase domain containing (221224_s_at), score: 0.62 DLSTPdihydrolipoamide S-succinyltransferase pseudogene (E2 component of 2-oxo-glutarate complex) (215210_s_at), score: 0.54 DLX4distal-less homeobox 4 (208216_at), score: 0.58 DMBT1deleted in malignant brain tumors 1 (208250_s_at), score: 0.86 DNAJC2DnaJ (Hsp40) homolog, subfamily C, member 2 (213097_s_at), score: 0.55 DSC3desmocollin 3 (206032_at), score: 0.54 DSPPdentin sialophosphoprotein (221681_s_at), score: 0.91 DUSP9dual specificity phosphatase 9 (205777_at), score: 0.52 EDAectodysplasin A (211130_x_at), score: 1 ENO3enolase 3 (beta, muscle) (204483_at), score: 0.53 EPN1epsin 1 (221141_x_at), score: 0.72 EPS8L1EPS8-like 1 (218778_x_at), score: 0.57 ETNK2ethanolamine kinase 2 (219268_at), score: 0.58 EXOC2exocyst complex component 2 (219349_s_at), score: -0.63 EXPH5exophilin 5 (214734_at), score: -0.6 F11coagulation factor XI (206610_s_at), score: 0.71 FBXO2F-box protein 2 (219305_x_at), score: 0.61 FCER1GFc fragment of IgE, high affinity I, receptor for; gamma polypeptide (204232_at), score: 0.67 FGL1fibrinogen-like 1 (205305_at), score: 0.67 FKBP10FK506 binding protein 10, 65 kDa (219249_s_at), score: 1 FLCNfolliculin (215645_at), score: 0.61 FLRT3fibronectin leucine rich transmembrane protein 3 (219250_s_at), score: -0.81 FLT3LGfms-related tyrosine kinase 3 ligand (210607_at), score: 0.56 GANgigaxonin (220124_at), score: -0.58 GARNL1GTPase activating Rap/RanGAP domain-like 1 (214855_s_at), score: -0.65 GATMglycine amidinotransferase (L-arginine:glycine amidinotransferase) (203178_at), score: -0.61 GBA3glucosidase, beta, acid 3 (cytosolic) (219954_s_at), score: 0.8 GCHFRGTP cyclohydrolase I feedback regulator (204867_at), score: 0.56 GGT1gamma-glutamyltransferase 1 (209919_x_at), score: 0.68 GGTLC1gamma-glutamyltransferase light chain 1 (211416_x_at), score: 0.53 GNG4guanine nucleotide binding protein (G protein), gamma 4 (205184_at), score: 0.52 GNL3LPguanine nucleotide binding protein-like 3 (nucleolar)-like pseudogene (220716_at), score: 0.6 GPR144G protein-coupled receptor 144 (216289_at), score: 0.97 GPR32G protein-coupled receptor 32 (221469_at), score: 0.77 GRM1glutamate receptor, metabotropic 1 (210939_s_at), score: 0.8 GSDMBgasdermin B (215659_at), score: -0.7 GZMMgranzyme M (lymphocyte met-ase 1) (207460_at), score: 0.62 HAB1B1 for mucin (215778_x_at), score: 0.91 HAMPhepcidin antimicrobial peptide (220491_at), score: 0.69 HAND1heart and neural crest derivatives expressed 1 (220138_at), score: 0.58 HAO2hydroxyacid oxidase 2 (long chain) (220801_s_at), score: 0.6 HIPK2homeodomain interacting protein kinase 2 (219028_at), score: 0.63 HIST1H2BChistone cluster 1, H2bc (214455_at), score: -0.57 HLA-DRB1major histocompatibility complex, class II, DR beta 1 (209312_x_at), score: 0.57 HPNhepsin (204934_s_at), score: 0.69 IFT140intraflagellar transport 140 homolog (Chlamydomonas) (204792_s_at), score: 0.83 IGLL3immunoglobulin lambda-like polypeptide 3 (215946_x_at), score: 0.57 IL22RA1interleukin 22 receptor, alpha 1 (220056_at), score: 0.59 IL23Ainterleukin 23, alpha subunit p19 (211796_s_at), score: 0.57 INAinternexin neuronal intermediate filament protein, alpha (204465_s_at), score: -0.69 INE1inactivation escape 1 (non-protein coding) (207252_at), score: 0.63 INHAinhibin, alpha (210141_s_at), score: 0.56 ISOC2isochorismatase domain containing 2 (218893_at), score: 0.55 ITGALintegrin, alpha L (antigen CD11A (p180), lymphocyte function-associated antigen 1; alpha polypeptide) (213475_s_at), score: 0.95 ITGB3integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61) (204628_s_at), score: 0.53 JARID1Ajumonji, AT rich interactive domain 1A (215698_at), score: -0.59 KCTD17potassium channel tetramerisation domain containing 17 (205561_at), score: 0.53 KIAA1659KIAA1659 protein (215674_at), score: 0.57 KIF26Bkinesin family member 26B (220002_at), score: 0.7 KRT8keratin 8 (209008_x_at), score: 0.66 KRT8P12keratin 8 pseudogene 12 (222060_at), score: 0.71 KSR1kinase suppressor of ras 1 (213769_at), score: 0.7 L3MBTLl(3)mbt-like (Drosophila) (213837_at), score: -0.63 LATS1LATS, large tumor suppressor, homolog 1 (Drosophila) (219813_at), score: -0.61 LILRA5leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5 (215838_at), score: 0.89 LILRB3leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3 (211133_x_at), score: 0.83 LILRB4leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4 (210152_at), score: 0.61 LOC100128919similar to HSPC157 (219865_at), score: -0.59 LOC100129500hypothetical protein LOC100129500 (212884_x_at), score: 0.59 LOC100133748similar to GTF2IRD2 protein (215569_at), score: 0.57 LOC149478hypothetical protein LOC149478 (215462_at), score: 0.76 LOC149501similar to keratin 8 (216821_at), score: 0.64 LOC388152hypothetical LOC388152 (220602_s_at), score: 0.54 LOC80054hypothetical LOC80054 (220465_at), score: 0.58 LRBALPS-responsive vesicle trafficking, beach and anchor containing (214109_at), score: -0.61 LRRN2leucine rich repeat neuronal 2 (216164_at), score: 0.57 MAPK8IP1mitogen-activated protein kinase 8 interacting protein 1 (213013_at), score: 0.86 MAPK8IP2mitogen-activated protein kinase 8 interacting protein 2 (205050_s_at), score: 0.67 MDM2Mdm2 p53 binding protein homolog (mouse) (205386_s_at), score: -0.67 MEF2Bmyocyte enhancer factor 2B (209926_at), score: 0.59 MERTKc-mer proto-oncogene tyrosine kinase (211913_s_at), score: 0.7 MICAL3microtubule associated monoxygenase, calponin and LIM domain containing 3 (212715_s_at), score: -0.6 MNDAmyeloid cell nuclear differentiation antigen (204959_at), score: 0.56 MOCS1molybdenum cofactor synthesis 1 (211673_s_at), score: 0.77 MSTP9macrophage stimulating, pseudogene 9 (213382_at), score: 0.57 MUC3Bmucin 3B, cell surface associated (214898_x_at), score: 0.6 MUC5ACmucin 5AC, oligomeric mucus/gel-forming (217182_at), score: 0.82 MYL10myosin, light chain 10, regulatory (221659_s_at), score: 0.6 MYO15Amyosin XVA (220288_at), score: 0.71 MYO5Bmyosin VB (202002_at), score: 0.57 NDPNorrie disease (pseudoglioma) (206022_at), score: -0.65 NOVA2neuro-oncological ventral antigen 2 (206477_s_at), score: 0.72 NPEPL1aminopeptidase-like 1 (89476_r_at), score: 0.63 NPIPL2nuclear pore complex interacting protein-like 2 (221992_at), score: 0.53 NUPL2nucleoporin like 2 (204003_s_at), score: 0.52 OGFOD12-oxoglutarate and iron-dependent oxygenase domain containing 1 (221090_s_at), score: 0.54 OPRL1opiate receptor-like 1 (206564_at), score: 0.89 PARD6Apar-6 partitioning defective 6 homolog alpha (C. elegans) (205245_at), score: 0.56 PCNXL2pecanex-like 2 (Drosophila) (39650_s_at), score: 0.63 PER3period homolog 3 (Drosophila) (221045_s_at), score: -0.56 PGCprogastricsin (pepsinogen C) (205261_at), score: 0.54 PGK2phosphoglycerate kinase 2 (217009_at), score: 0.54 PHC1polyhomeotic homolog 1 (Drosophila) (218338_at), score: -0.61 PHF2PHD finger protein 2 (212726_at), score: -0.8 PIN1Lpeptidylprolyl cis/trans isomerase, NIMA-interacting 1-like (pseudogene) (207582_at), score: 0.69 PIPOXpipecolic acid oxidase (221605_s_at), score: 0.86 PKLRpyruvate kinase, liver and RBC (222078_at), score: 0.98 PLXNB3plexin B3 (205957_at), score: 0.64 PMS2L2postmeiotic segregation increased 2-like 2 pseudogene (215410_at), score: 0.97 PNMAL1PNMA-like 1 (218824_at), score: -0.78 POLHpolymerase (DNA directed), eta (219380_x_at), score: 0.53 POM121L2POM121 membrane glycoprotein-like 2 (rat) (216582_at), score: 0.95 PRLHprolactin releasing hormone (221443_x_at), score: 0.6 PTPN6protein tyrosine phosphatase, non-receptor type 6 (206687_s_at), score: 0.8 PYHIN1pyrin and HIN domain family, member 1 (216748_at), score: 0.53 RAB40BRAB40B, member RAS oncogene family (217597_x_at), score: 0.63 RBM12BRNA binding motif protein 12B (51228_at), score: -0.88 RBM38RNA binding motif protein 38 (212430_at), score: 0.91 REG3Aregenerating islet-derived 3 alpha (205815_at), score: 0.54 RLN1relaxin 1 (211753_s_at), score: 0.61 RNF121ring finger protein 121 (219021_at), score: 0.92 RPL18AP6ribosomal protein L18a pseudogene 6 (216383_at), score: 0.61 RPLP2P1ribosomal protein, large P2, pseudogene 1 (216490_x_at), score: 0.6 SAA4serum amyloid A4, constitutive (207096_at), score: 0.54 SCLYselenocysteine lyase (221575_at), score: -0.74 SEPT5septin 5 (209767_s_at), score: 0.73 SH2D3ASH2 domain containing 3A (222169_x_at), score: 0.68 SIGLEC1sialic acid binding Ig-like lectin 1, sialoadhesin (44673_at), score: 0.65 SLC26A10solute carrier family 26, member 10 (214951_at), score: 0.62 SLC30A4solute carrier family 30 (zinc transporter), member 4 (207362_at), score: -0.91 SLC5A5solute carrier family 5 (sodium iodide symporter), member 5 (211123_at), score: 0.64 SLC6A11solute carrier family 6 (neurotransmitter transporter, GABA), member 11 (207048_at), score: 0.72 SLCO2A1solute carrier organic anion transporter family, member 2A1 (204368_at), score: 0.59 SNTG1syntrophin, gamma 1 (220405_at), score: -0.63 SOCS3suppressor of cytokine signaling 3 (206359_at), score: 0.59 SORBS1sorbin and SH3 domain containing 1 (218087_s_at), score: 0.69 SPATA1spermatogenesis associated 1 (221057_at), score: 0.64 SSX3synovial sarcoma, X breakpoint 3 (211731_x_at), score: 0.67 ST3GAL2ST3 beta-galactoside alpha-2,3-sialyltransferase 2 (217650_x_at), score: 0.55 ST8SIA3ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 (208064_s_at), score: 0.91 STIM1stromal interaction molecule 1 (202764_at), score: -0.65 STX17syntaxin 17 (218666_s_at), score: -0.59 STXBP2syntaxin binding protein 2 (209367_at), score: 0.65 SYT1synaptotagmin I (203999_at), score: -0.71 TAF15TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa (202840_at), score: 0.83 TAL1T-cell acute lymphocytic leukemia 1 (206283_s_at), score: 0.75 TGM4transglutaminase 4 (prostate) (217566_s_at), score: 0.61 TMC5transmembrane channel-like 5 (219580_s_at), score: 0.52 TMCC2transmembrane and coiled-coil domain family 2 (213096_at), score: 0.54 TMEM40transmembrane protein 40 (219503_s_at), score: 0.61 TMPRSS6transmembrane protease, serine 6 (214955_at), score: 0.95 TMSB4Ythymosin beta 4, Y-linked (206769_at), score: 0.76 TNFRSF14tumor necrosis factor receptor superfamily, member 14 (herpesvirus entry mediator) (209354_at), score: 0.56 TNFRSF8tumor necrosis factor receptor superfamily, member 8 (206729_at), score: 0.7 TNK1tyrosine kinase, non-receptor, 1 (217149_x_at), score: 0.7 TP53TG1TP53 target 1 (non-protein coding) (210241_s_at), score: 0.63 TRMT61AtRNA methyltransferase 61 homolog A (S. cerevisiae) (52741_at), score: 0.54 TRPV4transient receptor potential cation channel, subfamily V, member 4 (219516_at), score: 0.61 TSKStestis-specific serine kinase substrate (220545_s_at), score: 0.53 TULP2tubby like protein 2 (206733_at), score: 0.83 TYMPthymidine phosphorylase (217497_at), score: 0.52 UTF1undifferentiated embryonic cell transcription factor 1 (208275_x_at), score: 0.54 VCPIP1valosin containing protein (p97)/p47 complex interacting protein 1 (219810_at), score: 0.66 WFDC8WAP four-disulfide core domain 8 (215276_at), score: 0.61 XYLBxylulokinase homolog (H. influenzae) (214776_x_at), score: 0.61 YPEL1yippee-like 1 (Drosophila) (206063_x_at), score: 0.64 ZNF192zinc finger protein 192 (206579_at), score: -0.75 ZNF214zinc finger protein 214 (220497_at), score: -0.83 ZNF224zinc finger protein 224 (216983_s_at), score: 0.56 ZNF510zinc finger protein 510 (206053_at), score: -0.6 ZNF702Pzinc finger protein 702 pseudogene (206557_at), score: -0.7
| Id | sample | Experiment | ExpName | Array | Syndrome | Cell.line |
|---|---|---|---|---|---|---|
| E-TABM-263-raw-cel-1515485951.cel | 16 | 6 | Cycle | hgu133a2 | none | Cycle 1 |
| E-TABM-263-raw-cel-1515485711.cel | 4 | 6 | Cycle | hgu133a2 | none | Cycle 1 |
| E-TABM-263-raw-cel-1515486111.cel | 24 | 6 | Cycle | hgu133a2 | none | Cycle 1 |
| t21a 08-03.CEL | 4 | 1 | DS-CC | hgu133a | Down | DS-CC 4 |
| E-TABM-263-raw-cel-1515485931.cel | 15 | 6 | Cycle | hgu133a2 | none | Cycle 1 |
| E-TABM-263-raw-cel-1515485671.cel | 2 | 6 | Cycle | hgu133a2 | none | Cycle 1 |
