Under-expression is coded with green,
over-expression with red color.
extracellular region
The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
cellular_component
The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together.
proteinaceous extracellular matrix
A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity.
extracellular matrix
A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants).
extracellular region part
Any constituent part of the extracellular region, the space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers constituent parts of the host cell environment outside an intracellular parasite.
all
This term is the most general term possible
extracellular region part
Any constituent part of the extracellular region, the space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers constituent parts of the host cell environment outside an intracellular parasite.
A2Malpha-2-macroglobulin (217757_at), score: -0.53 ABCB1ATP-binding cassette, sub-family B (MDR/TAP), member 1 (209993_at), score: -1 ABCB4ATP-binding cassette, sub-family B (MDR/TAP), member 4 (207819_s_at), score: -0.65 ABHD14Aabhydrolase domain containing 14A (210006_at), score: 0.43 AHNAK2AHNAK nucleoprotein 2 (212992_at), score: 0.41 AIM2absent in melanoma 2 (206513_at), score: -0.64 ANK3ankyrin 3, node of Ranvier (ankyrin G) (206385_s_at), score: -0.52 APOL3apolipoprotein L, 3 (221087_s_at), score: -0.52 ARHGAP1Rho GTPase activating protein 1 (202117_at), score: 0.39 ARNTLaryl hydrocarbon receptor nuclear translocator-like (209824_s_at), score: 0.43 ATP6V1B2ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2 (201089_at), score: -0.55 BAALCbrain and acute leukemia, cytoplasmic (218899_s_at), score: 0.49 BACE1beta-site APP-cleaving enzyme 1 (217904_s_at), score: 0.39 BAZ2Abromodomain adjacent to zinc finger domain, 2A (201353_s_at), score: -0.57 BBXbobby sox homolog (Drosophila) (213016_at), score: -0.53 BHMT2betaine-homocysteine methyltransferase 2 (219902_at), score: -0.6 C10orf116chromosome 10 open reading frame 116 (203571_s_at), score: 0.5 C17orf70chromosome 17 open reading frame 70 (221800_s_at), score: 0.4 C20orf149chromosome 20 open reading frame 149 (218010_x_at), score: 0.44 C3orf64chromosome 3 open reading frame 64 (221935_s_at), score: 0.54 C4orf31chromosome 4 open reading frame 31 (219747_at), score: 0.62 C5orf23chromosome 5 open reading frame 23 (219054_at), score: 0.38 C5orf30chromosome 5 open reading frame 30 (221823_at), score: 0.58 CA3carbonic anhydrase III, muscle specific (204865_at), score: -0.55 CAPGcapping protein (actin filament), gelsolin-like (201850_at), score: 0.42 CARD10caspase recruitment domain family, member 10 (210026_s_at), score: -0.53 CD248CD248 molecule, endosialin (219025_at), score: 0.4 CD81CD81 molecule (200675_at), score: 0.4 CDKN1Acyclin-dependent kinase inhibitor 1A (p21, Cip1) (202284_s_at), score: 0.4 CDR2Lcerebellar degeneration-related protein 2-like (213230_at), score: 0.55 CGBchorionic gonadotropin, beta polypeptide (205387_s_at), score: 0.48 CH25Hcholesterol 25-hydroxylase (206932_at), score: 0.4 CKBcreatine kinase, brain (200884_at), score: 0.39 COL11A1collagen, type XI, alpha 1 (37892_at), score: 0.44 COL8A2collagen, type VIII, alpha 2 (221900_at), score: 0.46 COMPcartilage oligomeric matrix protein (205713_s_at), score: 0.55 COPZ2coatomer protein complex, subunit zeta 2 (219561_at), score: 0.45 CRATcarnitine acetyltransferase (209522_s_at), score: 0.4 CRTAPcartilage associated protein (201380_at), score: 0.53 CRYABcrystallin, alpha B (209283_at), score: 0.47 DDX17DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 (208151_x_at), score: -0.69 DDX3XDEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked (201211_s_at), score: -0.57 DDX3YDEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked (205000_at), score: 0.39 DIO2deiodinase, iodothyronine, type II (203699_s_at), score: -0.78 DUSP14dual specificity phosphatase 14 (203367_at), score: 0.45 ECM1extracellular matrix protein 1 (209365_s_at), score: 0.46 EIF1AYeukaryotic translation initiation factor 1A, Y-linked (204409_s_at), score: 0.44 EPHB2EPH receptor B2 (209589_s_at), score: -0.6 FAM108A1family with sequence similarity 108, member A1 (221267_s_at), score: 0.49 FAM169Afamily with sequence similarity 169, member A (213954_at), score: -0.62 FAT1FAT tumor suppressor homolog 1 (Drosophila) (201579_at), score: 0.53 FBN2fibrillin 2 (203184_at), score: 0.45 FBXW7F-box and WD repeat domain containing 7 (218751_s_at), score: 0.41 FHOD3formin homology 2 domain containing 3 (218980_at), score: 0.4 FKBP9FK506 binding protein 9, 63 kDa (212169_at), score: 0.55 FOLR3folate receptor 3 (gamma) (206371_at), score: 0.42 GABBR2gamma-aminobutyric acid (GABA) B receptor, 2 (209990_s_at), score: 0.48 GAGE4G antigen 4 (207086_x_at), score: -0.88 GAGE6G antigen 6 (208155_x_at), score: -0.85 GAS6growth arrest-specific 6 (202177_at), score: 0.51 GATA3GATA binding protein 3 (209604_s_at), score: -0.74 GBP1guanylate binding protein 1, interferon-inducible, 67kDa (202269_x_at), score: -0.52 GLSglutaminase (203159_at), score: 0.51 GLTPglycolipid transfer protein (219267_at), score: 0.49 HAS2hyaluronan synthase 2 (206432_at), score: 0.49 HERC5hect domain and RLD 5 (219863_at), score: -0.7 HGSNATheparan-alpha-glucosaminide N-acetyltransferase (218017_s_at), score: 0.52 HIST1H4Chistone cluster 1, H4c (205967_at), score: 0.5 HIST2H2AA3histone cluster 2, H2aa3 (214290_s_at), score: 0.46 HIVEP2human immunodeficiency virus type I enhancer binding protein 2 (212642_s_at), score: 0.52 HRASLSHRAS-like suppressor (219983_at), score: -0.53 HSPA4Lheat shock 70kDa protein 4-like (205543_at), score: -0.55 HSPB2heat shock 27kDa protein 2 (205824_at), score: 0.43 HSPB7heat shock 27kDa protein family, member 7 (cardiovascular) (218934_s_at), score: 0.59 IFI16interferon, gamma-inducible protein 16 (208965_s_at), score: -0.57 IFIT3interferon-induced protein with tetratricopeptide repeats 3 (204747_at), score: -0.51 IGFBP3insulin-like growth factor binding protein 3 (212143_s_at), score: 0.54 IL11RAinterleukin 11 receptor, alpha (204773_at), score: 0.4 IPO8importin 8 (205701_at), score: -0.52 IRS2insulin receptor substrate 2 (209185_s_at), score: 0.6 IRX5iroquois homeobox 5 (210239_at), score: 0.48 ISLRimmunoglobulin superfamily containing leucine-rich repeat (207191_s_at), score: 0.54 ITGBL1integrin, beta-like 1 (with EGF-like repeat domains) (214927_at), score: 0.39 KCNS3potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3 (205968_at), score: 0.4 KIAA0495KIAA0495 (213340_s_at), score: 0.53 KIF3Akinesin family member 3A (213623_at), score: -0.53 KRT14keratin 14 (209351_at), score: 0.45 KRT19keratin 19 (201650_at), score: 0.44 L1CAML1 cell adhesion molecule (204584_at), score: -0.52 LAMB3laminin, beta 3 (209270_at), score: -0.55 LAPTM5lysosomal multispanning membrane protein 5 (201721_s_at), score: 0.42 LBHlimb bud and heart development homolog (mouse) (221011_s_at), score: 0.46 LDOC1leucine zipper, down-regulated in cancer 1 (204454_at), score: 0.43 LIPAlipase A, lysosomal acid, cholesterol esterase (201847_at), score: 0.4 LOC388796hypothetical LOC388796 (65588_at), score: -0.52 LOC728855hypothetical LOC728855 (222001_x_at), score: -0.6 LRRC15leucine rich repeat containing 15 (213909_at), score: 0.41 LRRC2leucine rich repeat containing 2 (219949_at), score: 0.41 LRRFIP1leucine rich repeat (in FLII) interacting protein 1 (201861_s_at), score: 0.43 LTBP2latent transforming growth factor beta binding protein 2 (204682_at), score: 0.47 M6PRmannose-6-phosphate receptor (cation dependent) (200900_s_at), score: -0.58 MALLmal, T-cell differentiation protein-like (209373_at), score: 0.39 MAN2A1mannosidase, alpha, class 2A, member 1 (205105_at), score: 0.47 MARCH2membrane-associated ring finger (C3HC4) 2 (210075_at), score: 0.39 MARK1MAP/microtubule affinity-regulating kinase 1 (221047_s_at), score: -0.78 MED6mediator complex subunit 6 (207079_s_at), score: -0.52 MFAP5microfibrillar associated protein 5 (213764_s_at), score: 0.54 MITFmicrophthalmia-associated transcription factor (207233_s_at), score: -0.63 MSCmusculin (activated B-cell factor-1) (209928_s_at), score: -0.53 MT1Mmetallothionein 1M (217546_at), score: 0.46 MT1P3metallothionein 1 pseudogene 3 (221953_s_at), score: 0.48 MXRA5matrix-remodelling associated 5 (209596_at), score: 0.4 MXRA8matrix-remodelling associated 8 (213422_s_at), score: 0.42 MYO1Cmyosin IC (214656_x_at), score: 0.63 NAPGN-ethylmaleimide-sensitive factor attachment protein, gamma (210048_at), score: -0.52 NCR2natural cytotoxicity triggering receptor 2 (217045_x_at), score: 0.42 NCRNA00084non-protein coding RNA 84 (214657_s_at), score: -0.53 NDNnecdin homolog (mouse) (209550_at), score: 0.48 NEFLneurofilament, light polypeptide (221805_at), score: -0.71 NFASCneurofascin homolog (chicken) (213438_at), score: 0.4 NGDNneuroguidin, EIF4E binding protein (213794_s_at), score: -0.54 NMUneuromedin U (206023_at), score: -0.57 NOC2Lnucleolar complex associated 2 homolog (S. cerevisiae) (202115_s_at), score: -0.52 NONOnon-POU domain containing, octamer-binding (208698_s_at), score: -0.52 NRGNneurogranin (protein kinase C substrate, RC3) (204081_at), score: -0.61 NTF3neurotrophin 3 (206706_at), score: 0.46 OASL2'-5'-oligoadenylate synthetase-like (210797_s_at), score: -0.93 ODZ4odz, odd Oz/ten-m homolog 4 (Drosophila) (213273_at), score: 0.43 OPCMLopioid binding protein/cell adhesion molecule-like (214111_at), score: 0.43 PBX1pre-B-cell leukemia homeobox 1 (212148_at), score: 0.5 PDE10Aphosphodiesterase 10A (205501_at), score: -0.64 PDPK13-phosphoinositide dependent protein kinase-1 (204524_at), score: 0.46 PILRBpaired immunoglobin-like type 2 receptor beta (220954_s_at), score: -0.62 PNMA2paraneoplastic antigen MA2 (209598_at), score: -0.56 PODXLpodocalyxin-like (201578_at), score: 0.5 PPM2Cprotein phosphatase 2C, magnesium-dependent, catalytic subunit (218273_s_at), score: -0.53 PPP1R3Cprotein phosphatase 1, regulatory (inhibitor) subunit 3C (204284_at), score: 0.41 PSG2pregnancy specific beta-1-glycoprotein 2 (208134_x_at), score: 0.42 PTGER3prostaglandin E receptor 3 (subtype EP3) (213933_at), score: 0.46 PTPRBprotein tyrosine phosphatase, receptor type, B (205846_at), score: 0.47 PTPRRprotein tyrosine phosphatase, receptor type, R (210675_s_at), score: 0.39 QPCTglutaminyl-peptide cyclotransferase (205174_s_at), score: 0.45 RAB7L1RAB7, member RAS oncogene family-like 1 (218700_s_at), score: -0.55 RABGAP1LRAB GTPase activating protein 1-like (213982_s_at), score: 0.48 RASIP1Ras interacting protein 1 (220027_s_at), score: 0.41 REEP1receptor accessory protein 1 (204364_s_at), score: -0.52 RP6-213H19.1serine/threonine protein kinase MST4 (218499_at), score: -0.55 SAMD4Asterile alpha motif domain containing 4A (212845_at), score: 0.43 SAP18Sin3A-associated protein, 18kDa (208740_at), score: 0.4 SART3squamous cell carcinoma antigen recognized by T cells 3 (209127_s_at), score: -0.51 SCG5secretogranin V (7B2 protein) (203889_at), score: 0.48 SERPINE2serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 (212190_at), score: 0.42 SGCDsarcoglycan, delta (35kDa dystrophin-associated glycoprotein) (213543_at), score: 0.51 SLC10A3solute carrier family 10 (sodium/bile acid cotransporter family), member 3 (204928_s_at), score: 0.39 SLC16A1solute carrier family 16, member 1 (monocarboxylic acid transporter 1) (209900_s_at), score: 0.5 SLC30A1solute carrier family 30 (zinc transporter), member 1 (212907_at), score: 0.46 SLC4A4solute carrier family 4, sodium bicarbonate cotransporter, member 4 (203908_at), score: 0.5 SLC7A1solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 (212295_s_at), score: 0.41 SLC7A11solute carrier family 7, (cationic amino acid transporter, y+ system) member 11 (217678_at), score: -0.61 SMEK1SMEK homolog 1, suppressor of mek1 (Dictyostelium) (220368_s_at), score: -0.58 SMG1SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans) (210057_at), score: -0.57 SMPD1sphingomyelin phosphodiesterase 1, acid lysosomal (209420_s_at), score: 0.41 SNCAsynuclein, alpha (non A4 component of amyloid precursor) (204466_s_at), score: -0.7 SPARCsecreted protein, acidic, cysteine-rich (osteonectin) (212667_at), score: 0.43 SSR3signal sequence receptor, gamma (translocon-associated protein gamma) (217790_s_at), score: 0.52 SYTL2synaptotagmin-like 2 (220613_s_at), score: -0.53 TACSTD2tumor-associated calcium signal transducer 2 (202286_s_at), score: 0.52 TBC1D8TBC1 domain family, member 8 (with GRAM domain) (204526_s_at), score: -0.52 TCEAL2transcription elongation factor A (SII)-like 2 (211276_at), score: -0.74 TEKTEK tyrosine kinase, endothelial (206702_at), score: 0.4 TERF1telomeric repeat binding factor (NIMA-interacting) 1 (203448_s_at), score: -0.57 TIMP2TIMP metallopeptidase inhibitor 2 (203167_at), score: 0.62 TMEM204transmembrane protein 204 (219315_s_at), score: 0.46 TMEM47transmembrane protein 47 (209656_s_at), score: 0.49 TMEM51transmembrane protein 51 (218815_s_at), score: -0.53 TMEM8transmembrane protein 8 (five membrane-spanning domains) (221882_s_at), score: 0.44 TMOD1tropomodulin 1 (203661_s_at), score: -0.61 TNS1tensin 1 (221748_s_at), score: 0.39 TOB1transducer of ERBB2, 1 (202704_at), score: 0.51 TRIM16tripartite motif-containing 16 (204341_at), score: -0.53 TSPAN13tetraspanin 13 (217979_at), score: 0.56 TSPYL5TSPY-like 5 (213122_at), score: 0.45 TXNRD1thioredoxin reductase 1 (201266_at), score: -0.53 UAP1UDP-N-acteylglucosamine pyrophosphorylase 1 (209340_at), score: 0.54 UBE2D4ubiquitin-conjugating enzyme E2D 4 (putative) (218837_s_at), score: 0.4 UBL3ubiquitin-like 3 (201535_at), score: 0.6 UGT1A1UDP glucuronosyltransferase 1 family, polypeptide A1 (207126_x_at), score: -0.84 UGT1A6UDP glucuronosyltransferase 1 family, polypeptide A6 (206094_x_at), score: -0.85 UGT1A9UDP glucuronosyltransferase 1 family, polypeptide A9 (204532_x_at), score: -0.84 UROSuroporphyrinogen III synthase (203031_s_at), score: 0.4 USP18ubiquitin specific peptidase 18 (219211_at), score: -0.58 UXS1UDP-glucuronate decarboxylase 1 (219675_s_at), score: 0.41 VWA5Avon Willebrand factor A domain containing 5A (210102_at), score: -0.56 WDR48WD repeat domain 48 (222157_s_at), score: -0.55 WNT5Bwingless-type MMTV integration site family, member 5B (221029_s_at), score: 0.47 WT1Wilms tumor 1 (206067_s_at), score: -0.59 ZNF185zinc finger protein 185 (LIM domain) (203585_at), score: 0.39 ZNF227zinc finger protein 227 (217403_s_at), score: -0.5 ZNF281zinc finger protein 281 (218401_s_at), score: 0.41 ZNF415zinc finger protein 415 (205514_at), score: 0.4 ZNF804Azinc finger protein 804A (215767_at), score: -0.5
| Id | sample | Experiment | ExpName | Array | Syndrome | Cell.line |
|---|---|---|---|---|---|---|
| E-GEOD-3407-raw-cel-1437949750.cel | 6 | 4 | Cockayne | hgu133a | CS | CSB |
| E-GEOD-3407-raw-cel-1437949721.cel | 5 | 4 | Cockayne | hgu133a | CS | CSB |
| E-GEOD-3407-raw-cel-1437949579.cel | 2 | 4 | Cockayne | hgu133a | none | CSB |
| E-GEOD-3407-raw-cel-1437949938.cel | 8 | 4 | Cockayne | hgu133a | none | CSB |
| E-GEOD-3407-raw-cel-1437949854.cel | 7 | 4 | Cockayne | hgu133a | CS | eGFP |
| E-GEOD-3860-raw-cel-1561690199.cel | 1 | 5 | HGPS | hgu133a | none | GM0316B |
| E-GEOD-3860-raw-cel-1561690416.cel | 15 | 5 | HGPS | hgu133a | none | GM0316B |
| E-GEOD-3860-raw-cel-1561690360.cel | 12 | 5 | HGPS | hgu133a | none | GM0316B |
