Under-expression is coded with green,
over-expression with red color.
immune system process
Any process involved in the development or functioning of the immune system, an organismal system for calibrated responses to potential internal or invasive threats.
biological_process
Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
antigen processing and presentation
The process by which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex.
antigen processing and presentation of peptide antigen
The process by which an antigen-presenting cell expresses peptide antigen in association with an MHC protein complex on its cell surface, including proteolysis and transport steps for the peptide antigen both prior to and following assembly with the MHC protein complex. The peptide antigen is typically, but not always, processed from an endogenous or exogenous protein.
all
This term is the most general term possible
intracellular
The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
membrane
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
integral to membrane
Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane.
extracellular region
The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
endoplasmic reticulum
The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).
cellular_component
The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together.
cell
The basic structural and functional unit of all organisms. Includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope.
cytoplasm
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
intrinsic to membrane
Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane.
macromolecular complex
A stable assembly of two or more macromolecules, i.e. proteins, nucleic acids, carbohydrates or lipids, in which the constituent parts function together.
MHC class I peptide loading complex
A large, multisubunit complex which consists of the MHC class I-beta 2 microglobulin dimer, the transporter associated with antigen presentation (TAP), tapasin (an MHC-encoded membrane protein), the chaperone calreticulin and the thiol oxidoreductase ERp57. Functions in the assembly of peptides with newly synthesized MHC class I molecules.
TAP complex
A heterodimer composed of the subunits TAP1 and TAP2 (transporter associated with antigen presentation). Functions in the transport of antigenic peptides from the cytosol to the lumen of the endoplasmic reticulum.
organelle
Organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane.
membrane-bounded organelle
Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane.
intracellular organelle
Organized structure of distinctive morphology and function, occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane.
intracellular membrane-bounded organelle
Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane.
protein complex
Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or carbohydrate groups.
organelle part
Any constituent part of an organelle, an organized structure of distinctive morphology and function. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, but excludes the plasma membrane.
intracellular part
Any constituent part of the living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
membrane part
Any constituent part of a membrane, a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
endoplasmic reticulum part
Any constituent part of the endoplasmic reticulum, the irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae.
cytoplasmic part
Any constituent part of the cytoplasm, all of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
intracellular organelle part
A constituent part of an intracellular organelle, an organized structure of distinctive morphology and function, occurring within the cell. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton but excludes the plasma membrane.
cell part
Any constituent part of a cell, the basic structural and functional unit of all organisms.
all
This term is the most general term possible
cell part
Any constituent part of a cell, the basic structural and functional unit of all organisms.
organelle part
Any constituent part of an organelle, an organized structure of distinctive morphology and function. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, but excludes the plasma membrane.
intracellular membrane-bounded organelle
Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane.
intracellular organelle part
A constituent part of an intracellular organelle, an organized structure of distinctive morphology and function, occurring within the cell. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton but excludes the plasma membrane.
intracellular part
Any constituent part of the living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
membrane part
Any constituent part of a membrane, a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
intracellular organelle
Organized structure of distinctive morphology and function, occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane.
intracellular organelle part
A constituent part of an intracellular organelle, an organized structure of distinctive morphology and function, occurring within the cell. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton but excludes the plasma membrane.
TAP complex
A heterodimer composed of the subunits TAP1 and TAP2 (transporter associated with antigen presentation). Functions in the transport of antigenic peptides from the cytosol to the lumen of the endoplasmic reticulum.
MHC class I peptide loading complex
A large, multisubunit complex which consists of the MHC class I-beta 2 microglobulin dimer, the transporter associated with antigen presentation (TAP), tapasin (an MHC-encoded membrane protein), the chaperone calreticulin and the thiol oxidoreductase ERp57. Functions in the assembly of peptides with newly synthesized MHC class I molecules.
TAP complex
A heterodimer composed of the subunits TAP1 and TAP2 (transporter associated with antigen presentation). Functions in the transport of antigenic peptides from the cytosol to the lumen of the endoplasmic reticulum.
cytoplasmic part
Any constituent part of the cytoplasm, all of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
endoplasmic reticulum
The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).
endoplasmic reticulum part
Any constituent part of the endoplasmic reticulum, the irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae.
endoplasmic reticulum part
Any constituent part of the endoplasmic reticulum, the irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae.
ABCC4ATP-binding cassette, sub-family C (CFTR/MRP), member 4 (203196_at), score: 0.56 ABHD14Aabhydrolase domain containing 14A (210006_at), score: 0.57 AGBL5ATP/GTP binding protein-like 5 (218480_at), score: 0.81 AGPAT51-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon) (218096_at), score: -0.59 AKAP6A kinase (PRKA) anchor protein 6 (205359_at), score: 0.87 ALDH1A3aldehyde dehydrogenase 1 family, member A3 (203180_at), score: -0.61 ALDH1B1aldehyde dehydrogenase 1 family, member B1 (209646_x_at), score: 0.58 ALDH3B1aldehyde dehydrogenase 3 family, member B1 (211004_s_at), score: 0.53 ALDH6A1aldehyde dehydrogenase 6 family, member A1 (221589_s_at), score: 0.62 AMD1adenosylmethionine decarboxylase 1 (201196_s_at), score: -0.54 ANGPT1angiopoietin 1 (205608_s_at), score: 0.56 ANKRD11ankyrin repeat domain 11 (219437_s_at), score: -0.62 ARHGEF6Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6 (209539_at), score: 0.57 ARNT2aryl-hydrocarbon receptor nuclear translocator 2 (202986_at), score: 0.66 ASPNasporin (219087_at), score: 0.63 B2Mbeta-2-microglobulin (216231_s_at), score: 0.49 B3GALT4UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 4 (210205_at), score: 0.51 B3GNT1UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1 (203188_at), score: 0.77 BAG1BCL2-associated athanogene (211475_s_at), score: -0.61 BAZ1Bbromodomain adjacent to zinc finger domain, 1B (208445_s_at), score: -0.61 BCL7BB-cell CLL/lymphoma 7B (202518_at), score: -0.67 BDH23-hydroxybutyrate dehydrogenase, type 2 (218285_s_at), score: 0.51 BHLHE40basic helix-loop-helix family, member e40 (201170_s_at), score: -0.57 BST1bone marrow stromal cell antigen 1 (205715_at), score: 0.48 BTDbiotinidase (204167_at), score: 0.63 BTN3A1butyrophilin, subfamily 3, member A1 (209770_at), score: 0.72 BTN3A2butyrophilin, subfamily 3, member A2 (209846_s_at), score: 0.78 BTN3A3butyrophilin, subfamily 3, member A3 (204820_s_at), score: 0.64 C10orf116chromosome 10 open reading frame 116 (203571_s_at), score: 0.56 C10orf57chromosome 10 open reading frame 57 (218174_s_at), score: 0.67 C10orf72chromosome 10 open reading frame 72 (213381_at), score: 0.56 C13orf15chromosome 13 open reading frame 15 (218723_s_at), score: 0.63 C14orf94chromosome 14 open reading frame 94 (218383_at), score: 0.52 C15orf5chromosome 15 open reading frame 5 (208109_s_at), score: -0.53 C17orf85chromosome 17 open reading frame 85 (218896_s_at), score: -0.53 C1orf115chromosome 1 open reading frame 115 (218546_at), score: -0.72 C21orf66chromosome 21 open reading frame 66 (221158_at), score: 0.53 C2orf68chromosome 2 open reading frame 68 (221878_at), score: 0.49 C4orf18chromosome 4 open reading frame 18 (219872_at), score: 0.6 C4orf30chromosome 4 open reading frame 30 (219717_at), score: 0.76 C4orf31chromosome 4 open reading frame 31 (219747_at), score: 0.52 C6orf35chromosome 6 open reading frame 35 (218453_s_at), score: 0.55 C7orf58chromosome 7 open reading frame 58 (220032_at), score: 0.75 C9orf125chromosome 9 open reading frame 125 (213386_at), score: 0.56 C9orf127chromosome 9 open reading frame 127 (207839_s_at), score: 0.97 C9orf91chromosome 9 open reading frame 91 (221865_at), score: -0.52 CBScystathionine-beta-synthase (212816_s_at), score: -0.54 CCNG1cyclin G1 (208796_s_at), score: 0.54 CDC14BCDC14 cell division cycle 14 homolog B (S. cerevisiae) (208022_s_at), score: 0.69 CDC2L6cell division cycle 2-like 6 (CDK8-like) (212899_at), score: -0.59 CDH8cadherin 8, type 2 (217574_at), score: 0.77 CEBPGCCAAT/enhancer binding protein (C/EBP), gamma (204203_at), score: -0.64 CECR5cat eye syndrome chromosome region, candidate 5 (218592_s_at), score: -0.55 CHAC1ChaC, cation transport regulator homolog 1 (E. coli) (219270_at), score: -0.67 CHST5carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 5 (219182_at), score: 0.51 CHST7carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7 (206756_at), score: 0.64 CLEC11AC-type lectin domain family 11, member A (211709_s_at), score: 0.48 CLGNcalmegin (205830_at), score: -0.53 CLPBClpB caseinolytic peptidase B homolog (E. coli) (221845_s_at), score: 0.49 CPDcarboxypeptidase D (201942_s_at), score: 0.53 CRELD1cysteine-rich with EGF-like domains 1 (203368_at), score: 0.59 CRYBB2crystallin, beta B2 (206777_s_at), score: -0.59 CRYL1crystallin, lambda 1 (220753_s_at), score: 0.87 CSTAcystatin A (stefin A) (204971_at), score: -0.59 CTNNAL1catenin (cadherin-associated protein), alpha-like 1 (202468_s_at), score: 0.48 CTPS2CTP synthase II (219080_s_at), score: 0.58 CTSCcathepsin C (201487_at), score: 0.53 CTSOcathepsin O (203758_at), score: 0.64 CXCR7chemokine (C-X-C motif) receptor 7 (212977_at), score: -0.64 CYP26B1cytochrome P450, family 26, subfamily B, polypeptide 1 (219825_at), score: -0.64 DACT1dapper, antagonist of beta-catenin, homolog 1 (Xenopus laevis) (219179_at), score: -0.54 DAPK1death-associated protein kinase 1 (203139_at), score: -0.57 DBC1deleted in bladder cancer 1 (205818_at), score: -0.77 DDB2damage-specific DNA binding protein 2, 48kDa (203409_at), score: 0.52 DDIT3DNA-damage-inducible transcript 3 (209383_at), score: -0.77 DDIT4DNA-damage-inducible transcript 4 (202887_s_at), score: -0.69 DDX39DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 (201584_s_at), score: -0.53 DIAPH2diaphanous homolog 2 (Drosophila) (205603_s_at), score: 0.56 DIS3DIS3 mitotic control homolog (S. cerevisiae) (218362_s_at), score: 0.48 DMPKdystrophia myotonica-protein kinase (37996_s_at), score: 0.54 DNAJC4DnaJ (Hsp40) homolog, subfamily C, member 4 (206782_s_at), score: 0.68 DPYSL4dihydropyrimidinase-like 4 (205493_s_at), score: -0.69 EFHC2EF-hand domain (C-terminal) containing 2 (220591_s_at), score: 0.51 EGFL6EGF-like-domain, multiple 6 (219454_at), score: -0.81 EIF4A2eukaryotic translation initiation factor 4A, isoform 2 (200912_s_at), score: 0.55 EIF4EBP1eukaryotic translation initiation factor 4E binding protein 1 (221539_at), score: -0.58 EIF4Heukaryotic translation initiation factor 4H (206621_s_at), score: -0.66 EIF5eukaryotic translation initiation factor 5 (208290_s_at), score: -0.64 ENDOD1endonuclease domain containing 1 (212573_at), score: 0.67 ENPP1ectonucleotide pyrophosphatase/phosphodiesterase 1 (205066_s_at), score: 0.52 ERAP1endoplasmic reticulum aminopeptidase 1 (214012_at), score: 0.69 EVI2Aecotropic viral integration site 2A (204774_at), score: 0.68 F10coagulation factor X (205620_at), score: 0.66 FAM129Afamily with sequence similarity 129, member A (217966_s_at), score: -0.55 FAM13Bfamily with sequence similarity 13, member B (218518_at), score: -0.68 FCHSD2FCH and double SH3 domains 2 (203620_s_at), score: 0.6 FDXRferredoxin reductase (207813_s_at), score: 0.53 FGD1FYVE, RhoGEF and PH domain containing 1 (204819_at), score: 0.52 FGD6FYVE, RhoGEF and PH domain containing 6 (219901_at), score: 0.65 FGF9fibroblast growth factor 9 (glia-activating factor) (206404_at), score: -0.76 FIG4FIG4 homolog (S. cerevisiae) (203656_at), score: 0.54 FKBPLFK506 binding protein like (219187_at), score: -0.59 FLGfilaggrin (215704_at), score: -0.63 GAAglucosidase, alpha; acid (202812_at), score: 0.52 GABREgamma-aminobutyric acid (GABA) A receptor, epsilon (204537_s_at), score: -0.55 GBP2guanylate binding protein 2, interferon-inducible (202748_at), score: 0.64 GCNT1glucosaminyl (N-acetyl) transferase 1, core 2 (beta-1,6-N-acetylglucosaminyltransferase) (205505_at), score: 0.58 GDF15growth differentiation factor 15 (221577_x_at), score: -0.53 GDPD5glycerophosphodiester phosphodiesterase domain containing 5 (32502_at), score: 0.82 GFRA1GDNF family receptor alpha 1 (205696_s_at), score: 0.66 GLRBglycine receptor, beta (205280_at), score: 0.71 GLT25D2glycosyltransferase 25 domain containing 2 (209883_at), score: 0.56 GOLSYNGolgi-localized protein (218692_at), score: -0.79 GOT1glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1) (208813_at), score: -0.63 GPERG protein-coupled estrogen receptor 1 (210640_s_at), score: -0.55 GSNgelsolin (amyloidosis, Finnish type) (200696_s_at), score: 0.51 GSTM4glutathione S-transferase mu 4 (204149_s_at), score: 0.48 GSTT2glutathione S-transferase theta 2 (205439_at), score: 0.67 GTF2A1Lgeneral transcription factor IIA, 1-like (213413_at), score: 0.66 GTPBP1GTP binding protein 1 (219357_at), score: 0.49 GTPBP2GTP binding protein 2 (221050_s_at), score: -0.65 HABP4hyaluronan binding protein 4 (209818_s_at), score: 0.53 HHLA3HERV-H LTR-associating 3 (220387_s_at), score: 0.62 HLA-DMAmajor histocompatibility complex, class II, DM alpha (217478_s_at), score: 0.55 HLA-Emajor histocompatibility complex, class I, E (200904_at), score: 0.59 HLXH2.0-like homeobox (214438_at), score: 0.66 HNRNPMheterogeneous nuclear ribonucleoprotein M (200072_s_at), score: -0.53 HOXA7homeobox A7 (206848_at), score: -0.69 HRASv-Ha-ras Harvey rat sarcoma viral oncogene homolog (212983_at), score: -0.59 HSPA5heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) (211936_at), score: -0.66 HSPB3heat shock 27kDa protein 3 (206375_s_at), score: 0.76 ID1inhibitor of DNA binding 1, dominant negative helix-loop-helix protein (208937_s_at), score: -0.74 ID3inhibitor of DNA binding 3, dominant negative helix-loop-helix protein (207826_s_at), score: -0.52 IFFO1intermediate filament family orphan 1 (36030_at), score: 0.64 IFITM2interferon induced transmembrane protein 2 (1-8D) (201315_x_at), score: 0.51 IGBP1immunoglobulin (CD79A) binding protein 1 (202105_at), score: 0.55 IGF1insulin-like growth factor 1 (somatomedin C) (209541_at), score: -0.69 IGFBP5insulin-like growth factor binding protein 5 (203424_s_at), score: 0.52 IL27RAinterleukin 27 receptor, alpha (205926_at), score: 1 IL6Rinterleukin 6 receptor (205945_at), score: 0.71 IMP3IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast) (221688_s_at), score: -0.55 IMPAD1inositol monophosphatase domain containing 1 (218516_s_at), score: -0.57 ITGA7integrin, alpha 7 (216331_at), score: 0.49 ITGB8integrin, beta 8 (211488_s_at), score: -0.55 ITIH5inter-alpha (globulin) inhibitor H5 (219064_at), score: -0.76 ITM2Bintegral membrane protein 2B (217732_s_at), score: 0.64 JUNBjun B proto-oncogene (201473_at), score: -0.55 KAT2BK(lysine) acetyltransferase 2B (203845_at), score: 0.59 KCNAB1potassium voltage-gated channel, shaker-related subfamily, beta member 1 (210078_s_at), score: 0.59 KCTD15potassium channel tetramerisation domain containing 15 (218553_s_at), score: -0.74 KITv-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog (205051_s_at), score: 0.51 KLF5Kruppel-like factor 5 (intestinal) (209212_s_at), score: 0.74 LDB2LIM domain binding 2 (206481_s_at), score: 0.53 LEPRleptin receptor (209894_at), score: 0.76 LEPREL2leprecan-like 2 (204854_at), score: 0.76 LETMD1LETM1 domain containing 1 (207170_s_at), score: 0.61 LHFPlipoma HMGIC fusion partner (218656_s_at), score: 0.71 LHPPphospholysine phosphohistidine inorganic pyrophosphate phosphatase (218523_at), score: 0.61 LMF1lipase maturation factor 1 (219135_s_at), score: 0.66 LMOD1leiomodin 1 (smooth muscle) (203766_s_at), score: 0.76 LOC645139hypothetical LOC645139 (209064_x_at), score: -0.63 LONP1lon peptidase 1, mitochondrial (209017_s_at), score: -0.58 LPCAT4lysophosphatidylcholine acyltransferase 4 (40472_at), score: 0.58 LRRC32leucine rich repeat containing 32 (203835_at), score: 0.51 LUZP1leucine zipper protein 1 (221832_s_at), score: 0.5 MACROD1MACRO domain containing 1 (219188_s_at), score: 0.58 MAGI2membrane associated guanylate kinase, WW and PDZ domain containing 2 (209737_at), score: 0.59 MAPK8IP3mitogen-activated protein kinase 8 interacting protein 3 (213178_s_at), score: 0.51 MATN2matrilin 2 (202350_s_at), score: 0.53 MEGF9multiple EGF-like-domains 9 (212830_at), score: 0.62 MPPE1metallophosphoesterase 1 (209858_x_at), score: 0.56 MR1major histocompatibility complex, class I-related (207565_s_at), score: 0.86 MSTNmyostatin (207145_at), score: 0.58 MTHFD2methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase (201761_at), score: -0.56 MYCv-myc myelocytomatosis viral oncogene homolog (avian) (202431_s_at), score: -0.54 MZF1myeloid zinc finger 1 (210336_x_at), score: -0.54 N4BP2L1NEDD4 binding protein 2-like 1 (213375_s_at), score: 0.73 NARS2asparaginyl-tRNA synthetase 2, mitochondrial (putative) (219217_at), score: 0.49 NAV2neuron navigator 2 (218330_s_at), score: -0.54 NBEAneurobeachin (221207_s_at), score: -0.6 NCAM1neural cell adhesion molecule 1 (212843_at), score: 0.55 NDUFA2NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 2, 8kDa (213550_s_at), score: 0.61 NLGN1neuroligin 1 (205893_at), score: 0.53 NME3non-metastatic cells 3, protein expressed in (204862_s_at), score: 0.96 NPR3natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C) (219789_at), score: 0.54 NR2C2nuclear receptor subfamily 2, group C, member 2 (206038_s_at), score: -0.54 NRCAMneuronal cell adhesion molecule (204105_s_at), score: -0.88 NRP2neuropilin 2 (214632_at), score: 0.48 OBFC2Aoligonucleotide/oligosaccharide-binding fold containing 2A (219334_s_at), score: 0.49 OCEL1occludin/ELL domain containing 1 (205441_at), score: 0.62 P2RY5purinergic receptor P2Y, G-protein coupled, 5 (218589_at), score: 0.68 PAIP1poly(A) binding protein interacting protein 1 (208051_s_at), score: -0.58 PALLDpalladin, cytoskeletal associated protein (200906_s_at), score: 0.54 PAPOLGpoly(A) polymerase gamma (222273_at), score: 0.62 PAPPA2pappalysin 2 (213332_at), score: -0.75 PCK2phosphoenolpyruvate carboxykinase 2 (mitochondrial) (202847_at), score: -0.55 PCYOX1Lprenylcysteine oxidase 1 like (218953_s_at), score: 0.74 PDGFCplatelet derived growth factor C (218718_at), score: 0.61 PEX6peroxisomal biogenesis factor 6 (204545_at), score: 0.64 PGPEP1pyroglutamyl-peptidase I (219891_at), score: -0.58 PHC3polyhomeotic homolog 3 (Drosophila) (215521_at), score: -0.52 PHLPPPH domain and leucine rich repeat protein phosphatase (212719_at), score: 0.61 PIGHphosphatidylinositol glycan anchor biosynthesis, class H (209625_at), score: -0.54 PIK3CBphosphoinositide-3-kinase, catalytic, beta polypeptide (212688_at), score: 0.58 PLGLB2plasminogen-like B2 (205871_at), score: -0.66 PPANpeter pan homolog (Drosophila) (221649_s_at), score: -0.54 PPP2R2Dprotein phosphatase 2, regulatory subunit B, delta isoform (221772_s_at), score: -0.59 PPP2R5Aprotein phosphatase 2, regulatory subunit B', alpha isoform (202187_s_at), score: 0.49 PRELPproline/arginine-rich end leucine-rich repeat protein (204223_at), score: 0.64 PSAT1phosphoserine aminotransferase 1 (220892_s_at), score: -0.53 PSMB8proteasome (prosome, macropain) subunit, beta type, 8 (large multifunctional peptidase 7) (209040_s_at), score: 0.57 PSMB9proteasome (prosome, macropain) subunit, beta type, 9 (large multifunctional peptidase 2) (204279_at), score: 0.69 PTERphosphotriesterase related (218967_s_at), score: -0.53 PYCARDPYD and CARD domain containing (221666_s_at), score: 0.53 QPCTglutaminyl-peptide cyclotransferase (205174_s_at), score: 0.63 RAB22ARAB22A, member RAS oncogene family (218360_at), score: -0.59 RAGErenal tumor antigen (205130_at), score: 0.72 RALGPS2Ral GEF with PH domain and SH3 binding motif 2 (220338_at), score: -0.62 RBM3RNA binding motif (RNP1, RRM) protein 3 (208319_s_at), score: -0.57 RCBTB2regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 (204759_at), score: 0.67 RELBv-rel reticuloendotheliosis viral oncogene homolog B (205205_at), score: 0.51 RFTN1raftlin, lipid raft linker 1 (212646_at), score: 0.49 RFX5regulatory factor X, 5 (influences HLA class II expression) (202963_at), score: 0.59 SAMD14sterile alpha motif domain containing 14 (213866_at), score: 0.66 SCG5secretogranin V (7B2 protein) (203889_at), score: 0.6 SCN1Bsodium channel, voltage-gated, type I, beta (205508_at), score: 0.5 SCYE1small inducible cytokine subfamily E, member 1 (endothelial monocyte-activating) (202542_s_at), score: 0.54 SEC61GSec61 gamma subunit (203484_at), score: -0.53 SLC12A7solute carrier family 12 (potassium/chloride transporters), member 7 (218066_at), score: -0.66 SLC14A1solute carrier family 14 (urea transporter), member 1 (Kidd blood group) (205856_at), score: 0.53 SLC20A1solute carrier family 20 (phosphate transporter), member 1 (201920_at), score: -0.52 SLC3A2solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2 (200924_s_at), score: -0.6 SLC43A1solute carrier family 43, member 1 (204394_at), score: 0.51 SLC46A3solute carrier family 46, member 3 (214719_at), score: 0.94 SLC48A1solute carrier family 48 (heme transporter), member 1 (218417_s_at), score: 0.62 SLC4A2solute carrier family 4, anion exchanger, member 2 (erythrocyte membrane protein band 3-like 1) (202111_at), score: -0.6 SLC6A9solute carrier family 6 (neurotransmitter transporter, glycine), member 9 (207043_s_at), score: -0.72 SLC7A5solute carrier family 7 (cationic amino acid transporter, y+ system), member 5 (201195_s_at), score: -0.56 SLC9A7solute carrier family 9 (sodium/hydrogen exchanger), member 7 (214860_at), score: 0.5 SMUG1single-strand-selective monofunctional uracil-DNA glycosylase 1 (218685_s_at), score: -0.56 SORT1sortilin 1 (212807_s_at), score: 0.65 SOS1son of sevenless homolog 1 (Drosophila) (212780_at), score: -0.56 SPINT2serine peptidase inhibitor, Kunitz type, 2 (210715_s_at), score: 0.58 SPON1spondin 1, extracellular matrix protein (209436_at), score: -0.87 SPRY1sprouty homolog 1, antagonist of FGF signaling (Drosophila) (212558_at), score: -0.54 SSPNsarcospan (Kras oncogene-associated gene) (204963_at), score: 0.66 STAG1stromal antigen 1 (202293_at), score: -0.55 STARD5StAR-related lipid transfer (START) domain containing 5 (213820_s_at), score: 0.97 STAT4signal transducer and activator of transcription 4 (206118_at), score: 0.49 SUPT3Hsuppressor of Ty 3 homolog (S. cerevisiae) (206506_s_at), score: 0.51 TAP1transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) (202307_s_at), score: 0.53 TAPBPTAP binding protein (tapasin) (208829_at), score: 0.53 TBC1D12TBC1 domain family, member 12 (221858_at), score: 0.56 TBL2transducin (beta)-like 2 (212685_s_at), score: -0.66 TBX1T-box 1 (211273_s_at), score: 0.58 TCTN3tectonic family member 3 (212121_at), score: 0.55 TEX2testis expressed 2 (218099_at), score: 0.49 TFRCtransferrin receptor (p90, CD71) (207332_s_at), score: -0.59 THYN1thymocyte nuclear protein 1 (218491_s_at), score: 0.53 TIMP3TIMP metallopeptidase inhibitor 3 (201149_s_at), score: -0.59 TLE1transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila) (203221_at), score: 0.61 TM4SF20transmembrane 4 L six family member 20 (220639_at), score: 0.6 TMEM159transmembrane protein 159 (213272_s_at), score: 0.5 TMEM176Btransmembrane protein 176B (220532_s_at), score: -0.6 TMEM187transmembrane protein 187 (204340_at), score: 0.58 TNCtenascin C (201645_at), score: -0.56 TNFAIP2tumor necrosis factor, alpha-induced protein 2 (202510_s_at), score: 0.52 TNFRSF1Btumor necrosis factor receptor superfamily, member 1B (203508_at), score: 0.49 TNFSF12tumor necrosis factor (ligand) superfamily, member 12 (205611_at), score: 0.49 TOMM7translocase of outer mitochondrial membrane 7 homolog (yeast) (201812_s_at), score: 0.69 TRA2Btransformer 2 beta homolog (Drosophila) (200892_s_at), score: -0.6 TRAF3IP2TRAF3 interacting protein 2 (215411_s_at), score: 0.51 TRAPPC6Atrafficking protein particle complex 6A (204985_s_at), score: 0.77 TRIB3tribbles homolog 3 (Drosophila) (218145_at), score: -0.62 TRIM22tripartite motif-containing 22 (213293_s_at), score: 0.49 TRIM34tripartite motif-containing 34 (221044_s_at), score: 0.5 TSC22D1TSC22 domain family, member 1 (215111_s_at), score: 0.55 TUBA1Atubulin, alpha 1a (209118_s_at), score: -0.53 TUBA1Ctubulin, alpha 1c (211750_x_at), score: -0.61 TUBA3Ctubulin, alpha 3c (210527_x_at), score: -0.54 TUBA3Dtubulin, alpha 3d (216323_x_at), score: -0.61 TUBBtubulin, beta (209026_x_at), score: -0.52 UBA7ubiquitin-like modifier activating enzyme 7 (203281_s_at), score: 0.81 UBXN8UBX domain protein 8 (215983_s_at), score: -0.56 UCP2uncoupling protein 2 (mitochondrial, proton carrier) (208998_at), score: 0.61 UNC5Bunc-5 homolog B (C. elegans) (213100_at), score: -0.55 VAMP1vesicle-associated membrane protein 1 (synaptobrevin 1) (213326_at), score: 0.9 VCAM1vascular cell adhesion molecule 1 (203868_s_at), score: 0.67 VGLL3vestigial like 3 (Drosophila) (220327_at), score: 0.51 VPS11vacuolar protein sorting 11 homolog (S. cerevisiae) (203292_s_at), score: 0.5 WFS1Wolfram syndrome 1 (wolframin) (202908_at), score: 0.56 WWC1WW and C2 domain containing 1 (213085_s_at), score: 0.71 XPOTexportin, tRNA (nuclear export receptor for tRNAs) (212160_at), score: -0.52 XYLT2xylosyltransferase II (219401_at), score: 0.55 ZFP36L1zinc finger protein 36, C3H type-like 1 (211965_at), score: 0.49 ZMAT3zinc finger, matrin type 3 (219628_at), score: 0.49 ZNF132zinc finger protein 132 (207402_at), score: -0.52 ZNF334zinc finger protein 334 (220022_at), score: -0.6 ZNF37Bzinc finger protein 37B (215358_x_at), score: -0.52 ZNF551zinc finger protein 551 (211721_s_at), score: -0.56
| Id | sample | Experiment | ExpName | Array | Syndrome | Cell.line |
|---|---|---|---|---|---|---|
| H652_WBS.CEL | 17 | 8 | WBS | hgu133plus2 | WBS | WBS 1 |
| F348_WBS.CEL | 16 | 8 | WBS | hgu133plus2 | WBS | WBS 1 |
| F223_WBS.CEL | 15 | 8 | WBS | hgu133plus2 | WBS | WBS 1 |
