Under-expression is coded with green,
over-expression with red color.
metabolic process
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids.
transcription
The synthesis of either RNA on a template of DNA or DNA on a template of RNA.
transcription, DNA-dependent
The synthesis of RNA on a template of DNA.
regulation of transcription, DNA-dependent
Any process that modulates the frequency, rate or extent of DNA-dependent transcription.
biological_process
Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
biosynthetic process
The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
macromolecule biosynthetic process
The chemical reactions and pathways resulting in the formation of a macromolecule, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass.
regulation of biosynthetic process
Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of substances.
cellular process
Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level.
gene expression
The process by which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form.
regulation of gene expression
Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form.
regulation of macromolecule biosynthetic process
Any process that modulates the rate, frequency or extent of the chemical reactions and pathways resulting in the formation of a macromolecule, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass.
RNA metabolic process
The chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage.
regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids.
regulation of metabolic process
Any process that modulates the frequency, rate or extent of the chemical reactions and pathways within a cell or an organism.
regulation of cellular metabolic process
Any process that modulates the frequency, rate or extent of the chemical reactions and pathways by which individual cells transform chemical substances.
regulation of cellular biosynthetic process
Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of substances, carried out by individual cells.
RNA biosynthetic process
The chemical reactions and pathways resulting in the formation of RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage. Includes polymerization of ribonucleotide monomers.
cellular macromolecule biosynthetic process
The chemical reactions and pathways resulting in the formation of a macromolecule, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass, carried out by individual cells.
cellular biopolymer metabolic process
The chemical reactions and pathways involving biopolymers, long, repeating chains of monomers found in nature, such as polysaccharides and proteins, as carried out by individual cells.
cellular biopolymer biosynthetic process
The chemical reactions and pathways resulting in the formation of biopolymers, long, repeating chains of monomers found in nature, such as polysaccharides and proteins, as carried out by individual cells.
macromolecule metabolic process
The chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass.
biopolymer metabolic process
The chemical reactions and pathways involving biopolymers, long, repeating chains of monomers found in nature, such as polysaccharides and proteins.
biopolymer biosynthetic process
The chemical reactions and pathways resulting in the formation of biopolymers, long, repeating chains of monomers found in nature e.g. polysaccharides and proteins.
cellular metabolic process
The chemical reactions and pathways by which individual cells transform chemical substances.
primary metabolic process
The chemical reactions and pathways involving those compounds which are formed as a part of the normal anabolic and catabolic processes. These processes take place in most, if not all, cells of the organism.
cellular biosynthetic process
The chemical reactions and pathways resulting in the formation of substances, carried out by individual cells.
cellular macromolecule metabolic process
The chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass, as carried out by individual cells.
regulation of transcription
Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA.
regulation of biological process
Any process that modulates the frequency, rate or extent of a biological process. Biological processes are regulated by many means; examples include the control of gene expression, protein modification or interaction with a protein or substrate molecule.
regulation of cellular process
Any process that modulates the frequency, rate or extent of a cellular process, any of those that are carried out at the cellular level, but are not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level.
regulation of RNA metabolic process
Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving RNA.
regulation of macromolecule metabolic process
Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass.
biological regulation
Any process that modulates the frequency, rate or extent of any biological process, quality or function.
all
This term is the most general term possible
cellular metabolic process
The chemical reactions and pathways by which individual cells transform chemical substances.
regulation of metabolic process
Any process that modulates the frequency, rate or extent of the chemical reactions and pathways within a cell or an organism.
regulation of cellular process
Any process that modulates the frequency, rate or extent of a cellular process, any of those that are carried out at the cellular level, but are not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level.
regulation of biological process
Any process that modulates the frequency, rate or extent of a biological process. Biological processes are regulated by many means; examples include the control of gene expression, protein modification or interaction with a protein or substrate molecule.
regulation of biosynthetic process
Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of substances.
macromolecule biosynthetic process
The chemical reactions and pathways resulting in the formation of a macromolecule, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass.
regulation of macromolecule metabolic process
Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass.
regulation of cellular metabolic process
Any process that modulates the frequency, rate or extent of the chemical reactions and pathways by which individual cells transform chemical substances.
cellular biosynthetic process
The chemical reactions and pathways resulting in the formation of substances, carried out by individual cells.
cellular macromolecule metabolic process
The chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass, as carried out by individual cells.
nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
The chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids.
regulation of cellular metabolic process
Any process that modulates the frequency, rate or extent of the chemical reactions and pathways by which individual cells transform chemical substances.
regulation of macromolecule biosynthetic process
Any process that modulates the rate, frequency or extent of the chemical reactions and pathways resulting in the formation of a macromolecule, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass.
regulation of cellular biosynthetic process
Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of substances, carried out by individual cells.
cellular macromolecule biosynthetic process
The chemical reactions and pathways resulting in the formation of a macromolecule, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass, carried out by individual cells.
regulation of cellular biosynthetic process
Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of substances, carried out by individual cells.
regulation of macromolecule biosynthetic process
Any process that modulates the rate, frequency or extent of the chemical reactions and pathways resulting in the formation of a macromolecule, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass.
regulation of gene expression
Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Some protein processing events may be included when they are required to form an active form of a product from an inactive precursor form.
biopolymer biosynthetic process
The chemical reactions and pathways resulting in the formation of biopolymers, long, repeating chains of monomers found in nature e.g. polysaccharides and proteins.
cellular macromolecule biosynthetic process
The chemical reactions and pathways resulting in the formation of a macromolecule, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass, carried out by individual cells.
cellular biopolymer metabolic process
The chemical reactions and pathways involving biopolymers, long, repeating chains of monomers found in nature, such as polysaccharides and proteins, as carried out by individual cells.
transcription
The synthesis of either RNA on a template of DNA or DNA on a template of RNA.
regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids.
cellular biopolymer biosynthetic process
The chemical reactions and pathways resulting in the formation of biopolymers, long, repeating chains of monomers found in nature, such as polysaccharides and proteins, as carried out by individual cells.
regulation of transcription
Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA.
regulation of transcription
Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA.
regulation of RNA metabolic process
Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving RNA.
regulation of transcription
Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA.
transcription, DNA-dependent
The synthesis of RNA on a template of DNA.
regulation of transcription
Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA.
RNA metabolic process
The chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage.
cellular biopolymer biosynthetic process
The chemical reactions and pathways resulting in the formation of biopolymers, long, repeating chains of monomers found in nature, such as polysaccharides and proteins, as carried out by individual cells.
RNA biosynthetic process
The chemical reactions and pathways resulting in the formation of RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage. Includes polymerization of ribonucleotide monomers.
regulation of RNA metabolic process
Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving RNA.
regulation of transcription, DNA-dependent
Any process that modulates the frequency, rate or extent of DNA-dependent transcription.
transcription
The synthesis of either RNA on a template of DNA or DNA on a template of RNA.
regulation of transcription, DNA-dependent
Any process that modulates the frequency, rate or extent of DNA-dependent transcription.
intracellular
The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
cellular_component
The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together.
cell
The basic structural and functional unit of all organisms. Includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope.
nucleus
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
organelle
Organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane.
membrane-bounded organelle
Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane.
intracellular organelle
Organized structure of distinctive morphology and function, occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane.
intracellular membrane-bounded organelle
Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane.
intracellular part
Any constituent part of the living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
cell part
Any constituent part of a cell, the basic structural and functional unit of all organisms.
all
This term is the most general term possible
cell part
Any constituent part of a cell, the basic structural and functional unit of all organisms.
intracellular membrane-bounded organelle
Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane.
intracellular part
Any constituent part of the living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
intracellular organelle
Organized structure of distinctive morphology and function, occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane.
molecular_function
Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions.
nucleic acid binding
Interacting selectively with any nucleic acid.
DNA binding
Interacting selectively with DNA (deoxyribonucleic acid).
binding
The selective, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
metal ion binding
Interacting selectively with any metal ion.
zinc ion binding
Interacting selectively with zinc (Zn) ions.
ion binding
Interacting selectively with ions, charged atoms or groups of atoms.
cation binding
Interacting selectively with cations, charged atoms or groups of atoms with a net positive charge.
transition metal ion binding
Interacting selectively with a transition metal ions; a transition metal is an element whose atom has an incomplete d-subshell of extranuclear electrons, or which gives rise to a cation or cations with an incomplete d-subshell. Transition metals often have more than one valency state. Biologically relevant transition metals include vanadium, manganese, iron, copper, cobalt, nickel, molybdenum and silver.
all
This term is the most general term possible
transition metal ion binding
Interacting selectively with a transition metal ions; a transition metal is an element whose atom has an incomplete d-subshell of extranuclear electrons, or which gives rise to a cation or cations with an incomplete d-subshell. Transition metals often have more than one valency state. Biologically relevant transition metals include vanadium, manganese, iron, copper, cobalt, nickel, molybdenum and silver.
AASSaminoadipate-semialdehyde synthase (214829_at), score: 0.63 ABCG1ATP-binding cassette, sub-family G (WHITE), member 1 (204567_s_at), score: 0.7 ACOT11acyl-CoA thioesterase 11 (216103_at), score: 0.72 ADAM17ADAM metallopeptidase domain 17 (205745_x_at), score: 0.6 ADORA1adenosine A1 receptor (216220_s_at), score: 0.58 ADORA2Aadenosine A2a receptor (205013_s_at), score: 0.88 AKAP8A kinase (PRKA) anchor protein 8 (203848_at), score: 0.75 ALDH1B1aldehyde dehydrogenase 1 family, member B1 (209646_x_at), score: 0.67 ALDOAP2aldolase A, fructose-bisphosphate pseudogene 2 (211617_at), score: 0.75 ALMS1Alstrom syndrome 1 (214707_x_at), score: 0.9 ANKHankylosis, progressive homolog (mouse) (220076_at), score: 0.58 ANKRD10ankyrin repeat domain 10 (218093_s_at), score: 0.67 APBB2amyloid beta (A4) precursor protein-binding, family B, member 2 (212972_x_at), score: 0.98 ARAP2ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 (214102_at), score: 0.64 ARHGEF7Rho guanine nucleotide exchange factor (GEF) 7 (202548_s_at), score: 0.77 ARID4AAT rich interactive domain 4A (RBP1-like) (205062_x_at), score: 0.57 ARID4BAT rich interactive domain 4B (RBP1-like) (221230_s_at), score: 0.59 ATP5OATP synthase, H+ transporting, mitochondrial F1 complex, O subunit (216954_x_at), score: 0.64 B4GALT1UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 (201883_s_at), score: 0.58 BCL9B-cell CLL/lymphoma 9 (204129_at), score: 0.83 BCORBCL6 co-repressor (219433_at), score: 0.67 BHLHB9basic helix-loop-helix domain containing, class B, 9 (213709_at), score: 0.65 BRD1bromodomain containing 1 (204520_x_at), score: 0.66 BTAF1BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae) (209430_at), score: 0.68 BTF3L2basic transcription factor 3, like 2 (217461_x_at), score: 0.73 BXDC2brix domain containing 2 (219177_at), score: 0.63 C10orf110chromosome 10 open reading frame 110 (220703_at), score: 0.58 C10orf88chromosome 10 open reading frame 88 (219240_s_at), score: 0.73 C11orf57chromosome 11 open reading frame 57 (218314_s_at), score: 0.78 C12orf35chromosome 12 open reading frame 35 (218614_at), score: 0.59 C12orf49chromosome 12 open reading frame 49 (218867_s_at), score: 0.73 C13orf23chromosome 13 open reading frame 23 (218420_s_at), score: 0.74 C17orf86chromosome 17 open reading frame 86 (221621_at), score: 0.97 C1orf135chromosome 1 open reading frame 135 (220011_at), score: 0.63 C2orf24chromosome 2 open reading frame 24 (200070_at), score: 0.58 C4orf10chromosome 4 open reading frame 10 (214123_s_at), score: 0.77 C6orf106chromosome 6 open reading frame 106 (217925_s_at), score: 0.77 C6orf162chromosome 6 open reading frame 162 (213314_at), score: 0.69 C6orf62chromosome 6 open reading frame 62 (222309_at), score: 0.84 CBFA2T2core-binding factor, runt domain, alpha subunit 2; translocated to, 2 (207625_s_at), score: 0.7 CCDC25coiled-coil domain containing 25 (218125_s_at), score: 0.73 CCDC47coiled-coil domain containing 47 (217814_at), score: 0.68 CCT6Bchaperonin containing TCP1, subunit 6B (zeta 2) (206587_at), score: 0.57 CDC14ACDC14 cell division cycle 14 homolog A (S. cerevisiae) (205288_at), score: 0.8 CDC42SE1CDC42 small effector 1 (218157_x_at), score: 0.59 CDR1cerebellar degeneration-related protein 1, 34kDa (207276_at), score: 0.79 CEP27centrosomal protein 27kDa (220071_x_at), score: 0.62 CGGBP1CGG triplet repeat binding protein 1 (214050_at), score: 0.91 CHI3L1chitinase 3-like 1 (cartilage glycoprotein-39) (209395_at), score: 0.67 CIRCBF1 interacting corepressor (209571_at), score: 0.65 CIRBPcold inducible RNA binding protein (200811_at), score: 0.78 CISD3CDGSH iron sulfur domain 3 (213551_x_at), score: 0.82 CLEC4EC-type lectin domain family 4, member E (219859_at), score: 0.6 CLN8ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation) (219340_s_at), score: 0.61 CNOT6CCR4-NOT transcription complex, subunit 6 (217970_s_at), score: 0.8 CNOT8CCR4-NOT transcription complex, subunit 8 (202163_s_at), score: 0.69 COQ10Bcoenzyme Q10 homolog B (S. cerevisiae) (219397_at), score: 0.61 COX5Bcytochrome c oxidase subunit Vb (213736_at), score: 0.81 CPEcarboxypeptidase E (201117_s_at), score: 0.57 CREBZFCREB/ATF bZIP transcription factor (202978_s_at), score: 0.73 CUGBP1CUG triplet repeat, RNA binding protein 1 (204113_at), score: 0.69 CYorf15Bchromosome Y open reading frame 15B (214131_at), score: 0.57 CYP1A2cytochrome P450, family 1, subfamily A, polypeptide 2 (207608_x_at), score: 0.66 CYP2B6cytochrome P450, family 2, subfamily B, polypeptide 6 (217133_x_at), score: 0.73 DAPP1dual adaptor of phosphotyrosine and 3-phosphoinositides (219290_x_at), score: 0.88 DAZ1deleted in azoospermia 1 (216922_x_at), score: 0.66 DAZ3deleted in azoospermia 3 (208281_x_at), score: 0.6 DAZ4deleted in azoospermia 4 (216351_x_at), score: 0.67 DBR1debranching enzyme homolog 1 (S. cerevisiae) (219149_x_at), score: 0.63 DDX42DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 (201788_at), score: 0.57 DDX6DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 (204909_at), score: 0.76 DIDO1death inducer-obliterator 1 (218325_s_at), score: 0.62 DIP2ADIP2 disco-interacting protein 2 homolog A (Drosophila) (215529_x_at), score: 0.69 DKFZp686O1327hypothetical gene supported by BC043549; BX648102 (216877_at), score: 0.78 DNAH3dynein, axonemal, heavy chain 3 (220725_x_at), score: 0.92 DVL2dishevelled, dsh homolog 2 (Drosophila) (57532_at), score: 0.59 E2F3E2F transcription factor 3 (203693_s_at), score: 0.62 EEF1Deukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) (214395_x_at), score: 0.74 EIF4Beukaryotic translation initiation factor 4B (219599_at), score: 0.58 EIF4EBP2eukaryotic translation initiation factor 4E binding protein 2 (208770_s_at), score: 0.58 ELK4ELK4, ETS-domain protein (SRF accessory protein 1) (206919_at), score: 0.73 ELL3elongation factor RNA polymerase II-like 3 (219517_at), score: 0.56 EPB41L1erythrocyte membrane protein band 4.1-like 1 (212339_at), score: 0.82 FAM134Afamily with sequence similarity 134, member A (222129_at), score: 0.85 FAM175Bfamily with sequence similarity 175, member B (212837_at), score: 0.59 FAM53Bfamily with sequence similarity 53, member B (203206_at), score: 0.63 FAM60Afamily with sequence similarity 60, member A (220147_s_at), score: 0.58 FBXL11F-box and leucine-rich repeat protein 11 (208989_s_at), score: 0.81 FBXO41F-box protein 41 (44040_at), score: 0.75 FBXW11F-box and WD repeat domain containing 11 (209455_at), score: 0.56 FBXW12F-box and WD repeat domain containing 12 (215600_x_at), score: 0.81 FCARFc fragment of IgA, receptor for (211305_x_at), score: 0.84 FGD6FYVE, RhoGEF and PH domain containing 6 (219901_at), score: 0.72 FKSG49FKSG49 (211454_x_at), score: 0.65 FLJ10038hypothetical protein FLJ10038 (205510_s_at), score: 0.57 FLJ11292hypothetical protein FLJ11292 (220828_s_at), score: 1 FLJ21369hypothetical protein FLJ21369 (220401_at), score: 0.58 FLJ23172hypothetical LOC389177 (217016_x_at), score: 0.79 FLJ42627hypothetical LOC645644 (220352_x_at), score: 0.65 FNBP4formin binding protein 4 (212232_at), score: 0.84 FOXC1forkhead box C1 (213260_at), score: 0.58 FUBP1far upstream element (FUSE) binding protein 1 (212847_at), score: 0.79 G3BP1GTPase activating protein (SH3 domain) binding protein 1 (222187_x_at), score: 0.98 GARTphosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase (210005_at), score: 0.62 GATAD2AGATA zinc finger domain containing 2A (218131_s_at), score: 0.64 GIGYF2GRB10 interacting GYF protein 2 (212260_at), score: 0.72 GNAZguanine nucleotide binding protein (G protein), alpha z polypeptide (204993_at), score: 0.6 GNRHR2gonadotropin-releasing hormone (type 2) receptor 2 (213852_at), score: 0.58 GON4Lgon-4-like (C. elegans) (218873_at), score: 0.57 GPATCH8G patch domain containing 8 (212485_at), score: 0.71 GPBP1L1GC-rich promoter binding protein 1-like 1 (217877_s_at), score: 0.68 GTPBP3GTP binding protein 3 (mitochondrial) (213835_x_at), score: 0.79 HCG2P7HLA complex group 2 pseudogene 7 (216229_x_at), score: 0.88 HECAheadcase homolog (Drosophila) (218603_at), score: 0.69 HEY1hairy/enhancer-of-split related with YRPW motif 1 (44783_s_at), score: 0.8 HIC2hypermethylated in cancer 2 (212964_at), score: 0.62 HIST1H3Hhistone cluster 1, H3h (206110_at), score: 0.57 HIST2H2BEhistone cluster 2, H2be (202708_s_at), score: 0.66 HK2hexokinase 2 (202934_at), score: 0.6 HMGCS13-hydroxy-3-methylglutaryl-Coenzyme A synthase 1 (soluble) (221750_at), score: 0.57 HS2ST1heparan sulfate 2-O-sulfotransferase 1 (203285_s_at), score: 0.66 HSF2heat shock transcription factor 2 (209657_s_at), score: 0.63 IBD12Inflammatory bowel disease 12 (215373_x_at), score: 0.85 IER3IP1immediate early response 3 interacting protein 1 (211406_at), score: 0.73 IFT20intraflagellar transport 20 homolog (Chlamydomonas) (214283_at), score: 0.72 IMAASLC7A5 pseudogene (208118_x_at), score: 0.67 INSRinsulin receptor (213792_s_at), score: 0.79 IREB2iron-responsive element binding protein 2 (214666_x_at), score: 0.74 ITPKBinositol 1,4,5-trisphosphate 3-kinase B (203723_at), score: 0.76 JARID2jumonji, AT rich interactive domain 2 (203297_s_at), score: 0.79 JTV1JTV1 gene (209972_s_at), score: 0.64 KCNJ14potassium inwardly-rectifying channel, subfamily J, member 14 (220776_at), score: 0.67 KDSR3-ketodihydrosphingosine reductase (202419_at), score: 0.6 KIAA0894KIAA0894 protein (207436_x_at), score: 0.71 KIF1Bkinesin family member 1B (209234_at), score: 0.69 KLF11Kruppel-like factor 11 (218486_at), score: 0.57 KLHDC10kelch domain containing 10 (209256_s_at), score: 0.58 KLHL18kelch-like 18 (Drosophila) (212882_at), score: 0.64 KLHL24kelch-like 24 (Drosophila) (206551_x_at), score: 0.66 LAMB4laminin, beta 4 (215516_at), score: 0.57 LAMP1lysosomal-associated membrane protein 1 (213728_at), score: 0.77 LETM1leucine zipper-EF-hand containing transmembrane protein 1 (222006_at), score: 0.8 LIFRleukemia inhibitory factor receptor alpha (205876_at), score: 0.62 LIMK1LIM domain kinase 1 (204357_s_at), score: 0.78 LOC100128701heterogeneous nuclear ribonucleoprotein A1-like 2 pseudogene (216497_at), score: 0.85 LOC100128836similar to heterogeneous nuclear ribonucleoprotein A1 (217353_at), score: 0.83 LOC100129624hypothetical LOC100129624 (210748_at), score: 0.85 LOC100130233similar to NPM1 protein (216387_x_at), score: 0.75 LOC100134401hypothetical protein LOC100134401 (213605_s_at), score: 0.76 LOC152719hypothetical protein LOC152719 (215978_x_at), score: 0.71 LOC171220destrin-2 pseudogene (211325_x_at), score: 0.85 LOC23117PI-3-kinase-related kinase SMG-1 isoform 1 homolog (211996_s_at), score: 0.67 LOC51152melanoma antigen (220771_at), score: 0.58 LOC552889hypothetical protein LOC552889 (212114_at), score: 0.59 LOC643313similar to hypothetical protein LOC284701 (211050_x_at), score: 0.88 LOC644617hypothetical LOC644617 (221235_s_at), score: 0.92 LOC645139hypothetical LOC645139 (209064_x_at), score: 0.7 LOC647070hypothetical LOC647070 (215467_x_at), score: 0.86 LOC728844hypothetical LOC728844 (222040_at), score: 0.76 LRP4low density lipoprotein receptor-related protein 4 (212850_s_at), score: 0.66 LSM14ALSM14A, SCD6 homolog A (S. cerevisiae) (212131_at), score: 0.6 LSM14BLSM14B, SCD6 homolog B (S. cerevisiae) (219653_at), score: 0.61 LUC7L2LUC7-like 2 (S. cerevisiae) (220099_s_at), score: 0.59 MAFGv-maf musculoaponeurotic fibrosarcoma oncogene homolog G (avian) (204970_s_at), score: 0.57 MAGT1magnesium transporter 1 (210596_at), score: 0.74 MAP2K7mitogen-activated protein kinase kinase 7 (216206_x_at), score: 0.79 MAP3K9mitogen-activated protein kinase kinase kinase 9 (213927_at), score: 0.74 MBIPMAP3K12 binding inhibitory protein 1 (218411_s_at), score: 0.57 MCL1myeloid cell leukemia sequence 1 (BCL2-related) (214057_at), score: 0.85 MDN1MDN1, midasin homolog (yeast) (212693_at), score: 0.72 MED13Lmediator complex subunit 13-like (212207_at), score: 0.74 MEFVMediterranean fever (208262_x_at), score: 0.72 METAP2methionyl aminopeptidase 2 (202015_x_at), score: 0.89 METTL7Amethyltransferase like 7A (211424_x_at), score: 0.89 MFSD11major facilitator superfamily domain containing 11 (221192_x_at), score: 0.78 MKRN1makorin ring finger protein 1 (208082_x_at), score: 0.77 MLLT10myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 (216506_x_at), score: 0.75 MMDmonocyte to macrophage differentiation-associated (203414_at), score: 0.63 MRFAP1L1Morf4 family associated protein 1-like 1 (212199_at), score: 0.57 MRPL44mitochondrial ribosomal protein L44 (218202_x_at), score: 0.8 MSL2male-specific lethal 2 homolog (Drosophila) (218733_at), score: 0.69 MYNNmyoneurin (218926_at), score: 0.59 MYST2MYST histone acetyltransferase 2 (200049_at), score: 0.57 NACAnascent polypeptide-associated complex alpha subunit (222018_at), score: 0.77 NACA2nascent polypeptide-associated complex alpha subunit 2 (222224_at), score: 0.57 NARG1LNMDA receptor regulated 1-like (219378_at), score: 0.67 NAT11N-acetyltransferase 11 (GCN5-related, putative) (222369_at), score: 0.57 NFYAnuclear transcription factor Y, alpha (204108_at), score: 0.61 NOL9nucleolar protein 9 (218754_at), score: 0.66 NPIPL2nuclear pore complex interacting protein-like 2 (221992_at), score: 0.65 NRF1nuclear respiratory factor 1 (204652_s_at), score: 0.67 NUP214nucleoporin 214kDa (202155_s_at), score: 0.58 OPHN1oligophrenin 1 (206323_x_at), score: 0.73 OR2B2olfactory receptor, family 2, subfamily B, member 2 (216408_at), score: 0.61 OSBPoxysterol binding protein (201800_s_at), score: 0.6 PAIP1poly(A) binding protein interacting protein 1 (208051_s_at), score: 0.63 PARP6poly (ADP-ribose) polymerase family, member 6 (219639_x_at), score: 0.56 PBX2pre-B-cell leukemia homeobox 2 (202876_s_at), score: 0.78 PBXIP1pre-B-cell leukemia homeobox interacting protein 1 (214176_s_at), score: 0.61 PCGF2polycomb group ring finger 2 (203793_x_at), score: 0.78 PDE4Cphosphodiesterase 4C, cAMP-specific (phosphodiesterase E1 dunce homolog, Drosophila) (206792_x_at), score: 0.61 PELI2pellino homolog 2 (Drosophila) (219132_at), score: 0.84 PER2period homolog 2 (Drosophila) (205251_at), score: 0.66 PGFplacental growth factor (215179_x_at), score: 0.66 PHF21APHD finger protein 21A (203278_s_at), score: 0.61 PHF8PHD finger protein 8 (212916_at), score: 0.81 PIAS2protein inhibitor of activated STAT, 2 (37433_at), score: 0.64 PIGAphosphatidylinositol glycan anchor biosynthesis, class A (205281_s_at), score: 0.66 PIP4K2Cphosphatidylinositol-5-phosphate 4-kinase, type II, gamma (218942_at), score: 0.81 PLCB3phospholipase C, beta 3 (phosphatidylinositol-specific) (213384_x_at), score: 0.57 PLGLB1plasminogen-like B1 (214415_at), score: 0.59 PMS2CLPMS2 C-terminal like pseudogene (221206_at), score: 0.64 PODNL1podocan-like 1 (220411_x_at), score: 0.64 POGZpogo transposable element with ZNF domain (215281_x_at), score: 0.83 POLR1Bpolymerase (RNA) I polypeptide B, 128kDa (220113_x_at), score: 0.79 POLR3Fpolymerase (RNA) III (DNA directed) polypeptide F, 39 kDa (205218_at), score: 0.6 POM121L9PPOM121 membrane glycoprotein-like 9 (rat) pseudogene (222253_s_at), score: 0.7 POU4F2POU class 4 homeobox 2 (207725_at), score: 0.59 PPARGC1Aperoxisome proliferator-activated receptor gamma, coactivator 1 alpha (219195_at), score: 0.71 PPM1Bprotein phosphatase 1B (formerly 2C), magnesium-dependent, beta isoform (213225_at), score: 0.6 PRINSpsoriasis associated RNA induced by stress (non-protein coding) (216051_x_at), score: 0.86 PTBP2polypyrimidine tract binding protein 2 (218683_at), score: 0.66 QRICH1glutamine-rich 1 (209174_s_at), score: 0.7 QTRTD1queuine tRNA-ribosyltransferase domain containing 1 (219178_at), score: 0.61 RAD52RAD52 homolog (S. cerevisiae) (205647_at), score: 0.73 RAPGEF2Rap guanine nucleotide exchange factor (GEF) 2 (203097_s_at), score: 0.65 RBM16RNA binding motif protein 16 (203250_at), score: 0.58 RBMX2RNA binding motif protein, X-linked 2 (204098_at), score: 0.62 RGL1ral guanine nucleotide dissociation stimulator-like 1 (209568_s_at), score: 0.72 RGS10regulator of G-protein signaling 10 (214000_s_at), score: 0.61 RGS5regulator of G-protein signaling 5 (218353_at), score: 0.74 RHEBRas homolog enriched in brain (213409_s_at), score: 0.79 RIPK2receptor-interacting serine-threonine kinase 2 (209544_at), score: 0.63 RNF219ring finger protein 219 (219303_at), score: 0.63 RNF38ring finger protein 38 (218528_s_at), score: 0.63 RPL14ribosomal protein L14 (219138_at), score: 0.78 RPL18ribosomal protein L18 (222297_x_at), score: 0.65 RPL21P37ribosomal protein L21 pseudogene 37 (216479_at), score: 0.9 RPL23AP32ribosomal protein L23a pseudogene 32 (207283_at), score: 0.74 RPL35Aribosomal protein L35a (215208_x_at), score: 0.77 RPLP2ribosomal protein, large, P2 (200908_s_at), score: 0.77 RPS10ribosomal protein S10 (214001_x_at), score: 0.65 RPS10P3ribosomal protein S10 pseudogene 3 (217336_at), score: 0.74 RPS19ribosomal protein S19 (202648_at), score: 0.77 RPS3AP47ribosomal protein S3a pseudogene 47 (216823_at), score: 0.9 RTF1Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) (212301_at), score: 0.58 SAP30LSAP30-like (219129_s_at), score: 0.64 SAPS2SAPS domain family, member 2 (202792_s_at), score: 0.77 SAPS3SAPS domain family, member 3 (217928_s_at), score: 0.72 SCARF1scavenger receptor class F, member 1 (206995_x_at), score: 0.69 SCD5stearoyl-CoA desaturase 5 (220232_at), score: 0.75 SCML2sex comb on midleg-like 2 (Drosophila) (206147_x_at), score: 0.73 SETD2SET domain containing 2 (212493_s_at), score: 0.62 SETD4SET domain containing 4 (219482_at), score: 0.7 SFRS11splicing factor, arginine/serine-rich 11 (213742_at), score: 0.81 SFRS18splicing factor, arginine/serine-rich 18 (212176_at), score: 0.73 SFTPBsurfactant protein B (214354_x_at), score: 0.6 SFXN1sideroflexin 1 (218392_x_at), score: 0.67 SH3BP2SH3-domain binding protein 2 (217257_at), score: 0.92 SH3GL3SH3-domain GRB2-like 3 (211565_at), score: 0.88 SHOX2short stature homeobox 2 (210135_s_at), score: 0.6 SIAH1seven in absentia homolog 1 (Drosophila) (202981_x_at), score: 0.62 SKP1S-phase kinase-associated protein 1 (200719_at), score: 0.86 SLC11A1solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1 (217473_x_at), score: 0.69 SLC17A6solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6 (220551_at), score: 0.65 SLC25A44solute carrier family 25, member 44 (32091_at), score: 0.81 SLC30A5solute carrier family 30 (zinc transporter), member 5 (220181_x_at), score: 0.99 SLC35F2solute carrier family 35, member F2 (218826_at), score: 0.72 SLC6A6solute carrier family 6 (neurotransmitter transporter, taurine), member 6 (205921_s_at), score: 0.75 SMARCD2SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 (201827_at), score: 0.59 SMEK2SMEK homolog 2, suppressor of mek1 (Dictyostelium) (222270_at), score: 0.78 SMG7Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans) (201794_s_at), score: 0.62 SNIP1Smad nuclear interacting protein 1 (219409_at), score: 0.66 SNRPEsmall nuclear ribonucleoprotein polypeptide E (215450_at), score: 0.57 SNX15sorting nexin 15 (205482_x_at), score: 0.7 SPATA2spermatogenesis associated 2 (204433_s_at), score: 0.84 SPG21spastic paraplegia 21 (autosomal recessive, Mast syndrome) (215383_x_at), score: 0.76 SPINLW1serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin) (206318_at), score: 0.91 SPNsialophorin (206057_x_at), score: 0.97 SPTLC3serine palmitoyltransferase, long chain base subunit 3 (220456_at), score: 0.95 ST3GAL2ST3 beta-galactoside alpha-2,3-sialyltransferase 2 (217650_x_at), score: 0.61 STX3syntaxin 3 (209238_at), score: 0.63 SYCP1synaptonemal complex protein 1 (206740_x_at), score: 0.76 TAF11TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa (209358_at), score: 0.62 TAF5TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa (210053_at), score: 0.64 TBC1D15TBC1 domain family, member 15 (218268_at), score: 0.6 TBC1D4TBC1 domain family, member 4 (203386_at), score: 0.6 TBCCD1TBCC domain containing 1 (206451_at), score: 0.57 TCTN2tectonic family member 2 (206438_x_at), score: 0.83 TFAMtranscription factor A, mitochondrial (203177_x_at), score: 0.65 TFAP2Ctranscription factor AP-2 gamma (activating enhancer binding protein 2 gamma) (205286_at), score: 0.66 TGS1trimethylguanosine synthase homolog (S. cerevisiae) (219231_at), score: 0.69 TIMM8Atranslocase of inner mitochondrial membrane 8 homolog A (yeast) (210800_at), score: 1 TJAP1tight junction associated protein 1 (peripheral) (47608_at), score: 0.7 TLK2tousled-like kinase 2 (212997_s_at), score: 0.56 TMEM38Btransmembrane protein 38B (218772_x_at), score: 0.7 TNPO3transportin 3 (212317_at), score: 0.81 TP53TG3TP53 target 3 (220167_s_at), score: 0.7 TRAPPC10trafficking protein particle complex 10 (209412_at), score: 0.65 TRIM36tripartite motif-containing 36 (219736_at), score: 0.78 TRIM8tripartite motif-containing 8 (221012_s_at), score: 0.66 TRIT1tRNA isopentenyltransferase 1 (218617_at), score: 0.77 TRPV1transient receptor potential cation channel, subfamily V, member 1 (219632_s_at), score: 0.77 TUBA3Ctubulin, alpha 3c (210527_x_at), score: 0.68 TULP4tubby like protein 4 (218184_at), score: 0.69 UBAP1ubiquitin associated protein 1 (46270_at), score: 0.65 UBE2D1ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast) (211764_s_at), score: 0.65 UBQLN4ubiquilin 4 (222252_x_at), score: 0.86 UGT2B28UDP glucuronosyltransferase 2 family, polypeptide B28 (211682_x_at), score: 0.74 UNC84Aunc-84 homolog A (C. elegans) (214169_at), score: 0.7 UPP1uridine phosphorylase 1 (203234_at), score: 0.68 USP12ubiquitin specific peptidase 12 (213327_s_at), score: 0.67 USP3ubiquitin specific peptidase 3 (221654_s_at), score: 0.62 USP6ubiquitin specific peptidase 6 (Tre-2 oncogene) (206405_x_at), score: 0.71 UTF1undifferentiated embryonic cell transcription factor 1 (208275_x_at), score: 0.57 VAMP2vesicle-associated membrane protein 2 (synaptobrevin 2) (201557_at), score: 0.91 VEZTvezatin, adherens junctions transmembrane protein (207263_x_at), score: 0.62 VPRBPVpr (HIV-1) binding protein (204377_s_at), score: 0.64 VPS33Avacuolar protein sorting 33 homolog A (S. cerevisiae) (204590_x_at), score: 0.68 WDR43WD repeat domain 43 (214662_at), score: 0.63 WHSC2Wolf-Hirschhorn syndrome candidate 2 (34225_at), score: 0.57 WNT6wingless-type MMTV integration site family, member 6 (71933_at), score: 0.69 WRNWerner syndrome (205667_at), score: 0.63 XRCC2X-ray repair complementing defective repair in Chinese hamster cells 2 (207598_x_at), score: 0.79 XYLT2xylosyltransferase II (219401_at), score: 0.58 YTHDF1YTH domain family, member 1 (221741_s_at), score: 0.73 ZBTB39zinc finger and BTB domain containing 39 (205256_at), score: 0.98 ZC3H11Azinc finger CCCH-type containing 11A (205788_s_at), score: 0.58 ZC3H7Bzinc finger CCCH-type containing 7B (206169_x_at), score: 0.87 ZFAND6zinc finger, AN1-type domain 6 (221613_s_at), score: 0.59 ZFC3H1zinc finger, C3H1-type containing (213065_at), score: 0.68 ZFP106zinc finger protein 106 homolog (mouse) (217781_s_at), score: 0.65 ZFXzinc finger protein, X-linked (214678_x_at), score: 0.59 ZNF160zinc finger protein 160 (214715_x_at), score: 0.7 ZNF253zinc finger protein 253 (206900_x_at), score: 0.59 ZNF432zinc finger protein 432 (219848_s_at), score: 0.62 ZNF440zinc finger protein 440 (215892_at), score: 0.58 ZNF451zinc finger protein 451 (212557_at), score: 0.64 ZNF468zinc finger protein 468 (214751_at), score: 0.73 ZNF492zinc finger protein 492 (215532_x_at), score: 0.87 ZNF493zinc finger protein 493 (211064_at), score: 0.64 ZNF506zinc finger protein 506 (221626_at), score: 0.81 ZNF528zinc finger protein 528 (215019_x_at), score: 0.82 ZNF552zinc finger protein 552 (219741_x_at), score: 0.8 ZNF611zinc finger protein 611 (208137_x_at), score: 0.76 ZNF639zinc finger protein 639 (218413_s_at), score: 0.83 ZNF701zinc finger protein 701 (220242_x_at), score: 0.57 ZNF747zinc finger protein 747 (206180_x_at), score: 0.7 ZNF75Dzinc finger protein 75D (213659_at), score: 0.59 ZNF770zinc finger protein 770 (220608_s_at), score: 0.88 ZNF816Azinc finger protein 816A (217541_x_at), score: 0.89 ZSCAN12zinc finger and SCAN domain containing 12 (206507_at), score: 0.79
| Id | sample | Experiment | ExpName | Array | Syndrome | Cell.line |
|---|---|---|---|---|---|---|
| 10358_WBS.CEL | 1 | 8 | WBS | hgu133plus2 | WBS | WBS 1 |
| E-GEOD-4219-raw-cel-1311956275.cel | 8 | 7 | Sph-mono | hgu133plus2 | none | Sph-mon 1 |
| E-GEOD-4219-raw-cel-1311956634.cel | 19 | 7 | Sph-mono | hgu133plus2 | none | Sph-mon 1 |
| E-GEOD-4219-raw-cel-1311956398.cel | 12 | 7 | Sph-mono | hgu133plus2 | none | Sph-mon 1 |
| E-GEOD-4219-raw-cel-1311956083.cel | 2 | 7 | Sph-mono | hgu133plus2 | none | Sph-mon 1 |
