Previous module | Next module Module #136, TG: 2.8, TC: 2, 70 probes, 69 Entrez genes, 12 conditions

Help | Hide | Top Expression data


Expression data for module #136

color bar
Under-expression is coded with green, over-expression with red color.

Help | Hide | Top The GO tree — Biological processes

color bar

metabolic process

The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.

cytokine production

The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.

regulation of cytokine production

Any process that modulates the frequency, rate, or extent of production of a cytokine.

nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

Any cellular metabolic process involving nucleobases, nucleosides, nucleotides and nucleic acids.

nitrogen compound metabolic process

The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium.

biological_process

Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.

cellular process

Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level.

RNA metabolic process

The cellular chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage.

mRNA metabolic process

The chemical reactions and pathways involving mRNA, messenger RNA, which is responsible for carrying the coded genetic 'message', transcribed from DNA, to sites of protein assembly at the ribosomes.

multicellular organismal process

Any biological process, occurring at the level of a multicellular organism, pertinent to its function.

interleukin-12 production

The appearance of interleukin-12 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.

regulation of interleukin-12 production

Any process that modulates the frequency, rate, or extent of interleukin-12 production.

cellular nitrogen compound metabolic process

The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds, as carried out by individual cells.

macromolecule metabolic process

The chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass.

cellular metabolic process

The chemical reactions and pathways by which individual cells transform chemical substances.

primary metabolic process

The chemical reactions and pathways involving those compounds which are formed as a part of the normal anabolic and catabolic processes. These processes take place in most, if not all, cells of the organism.

cellular macromolecule metabolic process

The chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass, as carried out by individual cells.

regulation of biological process

Any process that modulates the frequency, rate or extent of a biological process. Biological processes are regulated by many means; examples include the control of gene expression, protein modification or interaction with a protein or substrate molecule.

regulation of multicellular organismal process

Any process that modulates the frequency, rate or extent of a multicellular organismal process, the processes pertinent to the function of a multicellular organism above the cellular level; includes the integrated processes of tissues and organs.

biological regulation

Any process that modulates the frequency, rate or extent of any biological process, quality or function.

nucleic acid metabolic process

Any cellular metabolic process involving nucleic acids.

all

NA

cellular metabolic process

The chemical reactions and pathways by which individual cells transform chemical substances.

regulation of multicellular organismal process

Any process that modulates the frequency, rate or extent of a multicellular organismal process, the processes pertinent to the function of a multicellular organism above the cellular level; includes the integrated processes of tissues and organs.

regulation of biological process

Any process that modulates the frequency, rate or extent of a biological process. Biological processes are regulated by many means; examples include the control of gene expression, protein modification or interaction with a protein or substrate molecule.

cellular nitrogen compound metabolic process

The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds, as carried out by individual cells.

cellular macromolecule metabolic process

The chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass, as carried out by individual cells.

regulation of cytokine production

Any process that modulates the frequency, rate, or extent of production of a cytokine.

nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

Any cellular metabolic process involving nucleobases, nucleosides, nucleotides and nucleic acids.

regulation of interleukin-12 production

Any process that modulates the frequency, rate, or extent of interleukin-12 production.

RNA metabolic process

The cellular chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage.

Help | Hide | Top The GO tree — Cellular Components

color bar

Help | Hide | Top The GO tree — Molecular Function

color bar

Help | Show | Top GO BP test for over-representation

Help | Show | Top GO CC test for over-representation

Help | Show | Top GO MF test for over-representation

Help | Hide | Top KEGG Pathway test for over-representation

No enriched terms

Help | Hide | Top miRNA test for over-representation

No enriched terms

Help | Hide | Top Chromosome test for over-representation

No enriched terms

Help | Hide | Top Genes

Entrez genes

ADAT2adenosine deaminase, tRNA-specific 2, TAD2 homolog (S. cerevisiae) (ENSG00000189007), score: 0.74 APBB3amyloid beta (A4) precursor protein-binding, family B, member 3 (ENSG00000113108), score: -0.7 ARNTaryl hydrocarbon receptor nuclear translocator (ENSG00000143437), score: 0.69 ARPC5Lactin related protein 2/3 complex, subunit 5-like (ENSG00000136950), score: -0.74 ATP7AATPase, Cu++ transporting, alpha polypeptide (ENSG00000165240), score: 0.71 BRWD3bromodomain and WD repeat domain containing 3 (ENSG00000165288), score: 0.75 C13orf39chromosome 13 open reading frame 39 (ENSG00000139780), score: 0.98 C18orf22chromosome 18 open reading frame 22 (ENSG00000101546), score: -0.67 C1orf55chromosome 1 open reading frame 55 (ENSG00000143751), score: 0.71 C20orf79chromosome 20 open reading frame 79 (ENSG00000132631), score: 0.7 CD40LGCD40 ligand (ENSG00000102245), score: 0.75 CDCP2CUB domain containing protein 2 (ENSG00000157211), score: 0.99 CELF1CUGBP, Elav-like family member 1 (ENSG00000149187), score: -0.7 CHRNA5cholinergic receptor, nicotinic, alpha 5 (ENSG00000169684), score: 0.85 CIB3calcium and integrin binding family member 3 (ENSG00000141977), score: 0.82 CMAScytidine monophosphate N-acetylneuraminic acid synthetase (ENSG00000111726), score: -0.73 DFFBDNA fragmentation factor, 40kDa, beta polypeptide (caspase-activated DNase) (ENSG00000169598), score: 0.77 DHX32DEAH (Asp-Glu-Ala-His) box polypeptide 32 (ENSG00000089876), score: -0.89 ERGIC3ERGIC and golgi 3 (ENSG00000125991), score: -0.68 FAM109Bfamily with sequence similarity 109, member B (ENSG00000177096), score: 0.81 FBXL18F-box and leucine-rich repeat protein 18 (ENSG00000155034), score: 0.93 FNBP4formin binding protein 4 (ENSG00000109920), score: 0.74 HNRNPA0heterogeneous nuclear ribonucleoprotein A0 (ENSG00000177733), score: -0.68 HPGDShematopoietic prostaglandin D synthase (ENSG00000163106), score: 0.84 ICOSinducible T-cell co-stimulator (ENSG00000163600), score: 0.78 IMPG2interphotoreceptor matrix proteoglycan 2 (ENSG00000081148), score: 0.88 INPPL1inositol polyphosphate phosphatase-like 1 (ENSG00000165458), score: -0.76 IRF8interferon regulatory factor 8 (ENSG00000140968), score: 0.7 KIAA0368KIAA0368 (ENSG00000136813), score: -0.69 KLHL28kelch-like 28 (Drosophila) (ENSG00000179454), score: 0.69 KREMEN1kringle containing transmembrane protein 1 (ENSG00000183762), score: -0.68 LCMT1leucine carboxyl methyltransferase 1 (ENSG00000205629), score: -0.74 LRRC41leucine rich repeat containing 41 (ENSG00000132128), score: -0.78 LSM4LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae) (ENSG00000130520), score: -0.78 MST4serine/threonine protein kinase MST4 (ENSG00000134602), score: 0.71 NUSAP1nucleolar and spindle associated protein 1 (ENSG00000137804), score: 0.72 OLFML2Aolfactomedin-like 2A (ENSG00000185585), score: 0.78 ORC5Lorigin recognition complex, subunit 5-like (yeast) (ENSG00000164815), score: -0.73 PAIP1poly(A) binding protein interacting protein 1 (ENSG00000172239), score: -0.68 PANX3pannexin 3 (ENSG00000154143), score: 1 PAPOLGpoly(A) polymerase gamma (ENSG00000115421), score: -0.92 PARNpoly(A)-specific ribonuclease (deadenylation nuclease) (ENSG00000140694), score: -0.72 PIK3CGphosphoinositide-3-kinase, catalytic, gamma polypeptide (ENSG00000105851), score: 0.8 PLRG1pleiotropic regulator 1 (PRL1 homolog, Arabidopsis) (ENSG00000171566), score: -0.72 POF1Bpremature ovarian failure, 1B (ENSG00000124429), score: 0.7 POLE2polymerase (DNA directed), epsilon 2 (p59 subunit) (ENSG00000100479), score: 0.86 PRKAG3protein kinase, AMP-activated, gamma 3 non-catalytic subunit (ENSG00000115592), score: 0.88 RBP1retinol binding protein 1, cellular (ENSG00000114115), score: -0.72 RELv-rel reticuloendotheliosis viral oncogene homolog (avian) (ENSG00000162924), score: 0.75 SDF4stromal cell derived factor 4 (ENSG00000078808), score: -0.72 SEPT2septin 2 (ENSG00000168385), score: -0.82 SLBPstem-loop binding protein (ENSG00000163950), score: -0.84 SLC26A5solute carrier family 26, member 5 (prestin) (ENSG00000170615), score: 0.95 SPINK4serine peptidase inhibitor, Kazal type 4 (ENSG00000122711), score: 0.8 SSNA1Sjogren syndrome nuclear autoantigen 1 (ENSG00000176101), score: -0.73 SYPL1synaptophysin-like 1 (ENSG00000008282), score: -0.69 TT, brachyury homolog (mouse) (ENSG00000164458), score: 0.71 TAF3TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa (ENSG00000165632), score: 0.83 TAF5TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa (ENSG00000148835), score: 0.73 TMEM199transmembrane protein 199 (ENSG00000244045), score: 0.76 TMEM41Atransmembrane protein 41A (ENSG00000163900), score: 0.72 TMX1thioredoxin-related transmembrane protein 1 (ENSG00000139921), score: -0.83 TNFRSF11Atumor necrosis factor receptor superfamily, member 11a, NFKB activator (ENSG00000141655), score: 0.77 TUBB1tubulin, beta 1 (ENSG00000101162), score: 0.73 UBAP1ubiquitin associated protein 1 (ENSG00000165006), score: -0.8 UBE2Zubiquitin-conjugating enzyme E2Z (ENSG00000159202), score: -0.74 WDR41WD repeat domain 41 (ENSG00000164253), score: -0.78 XPR1xenotropic and polytropic retrovirus receptor 1 (ENSG00000143324), score: 0.69 ZBTB8Bzinc finger and BTB domain containing 8B (ENSG00000215897), score: 0.89

Non-Entrez genes

ENSG00000139921Unknown, score: -0.81

Help | Hide | Top Conditions

Id species tissue sex individual
gga_ts_m2_ca1 gga ts m 2
gga_br_f_ca1 gga br f _
gga_br_m_ca1 gga br m _
gga_cb_f_ca1 gga cb f _
gga_ts_m1_ca1 gga ts m 1
gga_cb_m_ca1 gga cb m _
gga_ht_f_ca1 gga ht f _
gga_ht_m_ca1 gga ht m _
gga_lv_f_ca1 gga lv f _
gga_kd_f_ca1 gga kd f _
gga_kd_m_ca1 gga kd m _
gga_lv_m_ca1 gga lv m _

Valid XHTML 1.1 Valid CSS! Best viewed with Firefox

© 2008-2010 Computational Biology Group, Department of Medical Genetics, University of Lausanne, Switzerland