Previous module | Next module Module #149, TG: 2.8, TC: 1, 11 probes, 11 Entrez genes, 29 conditions

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Expression data for module #149

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Under-expression is coded with green, over-expression with red color.

Help | Hide | Top The GO tree — Biological processes

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metabolic process

The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.

organic acid metabolic process

The chemical reactions and pathways involving organic acids, any acidic compound containing carbon in covalent linkage.

biological_process

Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.

cellular process

Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level.

carboxylic acid metabolic process

The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-).

cellular ketone metabolic process

The chemical reactions and pathways involving any of a class of organic compounds that contain the carbonyl group, CO, and in which the carbonyl group is bonded only to carbon atoms, as carried out by individual cells. The general formula for a ketone is RCOR, where R and R are alkyl or aryl groups.

oxoacid metabolic process

The chemical reactions and pathways involving any oxoacid; an oxoacid is a compound which contains oxygen, at least one other element, and at least one hydrogen bound to oxygen, and which produces a conjugate base by loss of positive hydrogen ion(s) (hydrons).

cellular metabolic process

The chemical reactions and pathways by which individual cells transform chemical substances.

small molecule metabolic process

The chemical reactions and pathways involving small molecules, any monomeric molecule of small relative molecular mass.

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NA

cellular metabolic process

The chemical reactions and pathways by which individual cells transform chemical substances.

organic acid metabolic process

The chemical reactions and pathways involving organic acids, any acidic compound containing carbon in covalent linkage.

cellular ketone metabolic process

The chemical reactions and pathways involving any of a class of organic compounds that contain the carbonyl group, CO, and in which the carbonyl group is bonded only to carbon atoms, as carried out by individual cells. The general formula for a ketone is RCOR, where R and R are alkyl or aryl groups.

oxoacid metabolic process

The chemical reactions and pathways involving any oxoacid; an oxoacid is a compound which contains oxygen, at least one other element, and at least one hydrogen bound to oxygen, and which produces a conjugate base by loss of positive hydrogen ion(s) (hydrons).

Help | Hide | Top The GO tree — Cellular Components

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Help | Hide | Top The GO tree — Molecular Function

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Help | Show | Top GO BP test for over-representation

Help | Show | Top GO CC test for over-representation

Help | Show | Top GO MF test for over-representation

Help | Hide | Top KEGG Pathway test for over-representation

Id Pvalue ExpCount Count Size Term
01100 2.047e-02 1.065 5
353 Metabolic pathways
00380 3.342e-02 0.04825 2
16 Tryptophan metabolism

Help | Hide | Top miRNA test for over-representation

No enriched terms

Help | Hide | Top Chromosome test for over-representation

No enriched terms

Help | Hide | Top Genes

Entrez genes

ACMSDaminocarboxymuconate semialdehyde decarboxylase (ENSG00000153086), score: 0.94 CRYL1crystallin, lambda 1 (ENSG00000165475), score: 0.91 DDCdopa decarboxylase (aromatic L-amino acid decarboxylase) (ENSG00000132437), score: 0.91 HAO2hydroxyacid oxidase 2 (long chain) (ENSG00000116882), score: 0.91 PLCG2phospholipase C, gamma 2 (phosphatidylinositol-specific) (ENSG00000197943), score: 0.94 RAB17RAB17, member RAS oncogene family (ENSG00000124839), score: 0.93 SLC5A9solute carrier family 5 (sodium/glucose cotransporter), member 9 (ENSG00000117834), score: 0.95 SLC7A9solute carrier family 7 (cationic amino acid transporter, y+ system), member 9 (ENSG00000021488), score: 1 TMPRSS2transmembrane protease, serine 2 (ENSG00000184012), score: 0.95 TRPV4transient receptor potential cation channel, subfamily V, member 4 (ENSG00000111199), score: 0.95 WDR72WD repeat domain 72 (ENSG00000166415), score: 0.99

Non-Entrez genes

Unknown, score:

Help | Hide | Top Conditions

Id species tissue sex individual
ppy_lv_m_ca1 ppy lv m _
ppa_lv_m_ca1 ppa lv m _
oan_kd_f_ca1 oan kd f _
ptr_lv_m_ca1 ptr lv m _
ppa_lv_f_ca1 ppa lv f _
mml_lv_f_ca1 mml lv f _
ggo_lv_m_ca1 ggo lv m _
hsa_lv_m2_ca1 hsa lv m 2
ggo_lv_f_ca1 ggo lv f _
ppy_kd_f_ca1 ppy kd f _
mmu_kd_m1_ca1 mmu kd m 1
mdo_kd_m_ca1 mdo kd m _
ppa_kd_m_ca1 ppa kd m _
mmu_kd_f_ca1 mmu kd f _
hsa_lv_m1_ca1 hsa lv m 1
mmu_kd_m2_ca1 mmu kd m 2
ptr_kd_f_ca1 ptr kd f _
mml_lv_m_ca1 mml lv m _
mdo_kd_f_ca1 mdo kd f _
ppy_kd_m_ca1 ppy kd m _
ppa_kd_f_ca1 ppa kd f _
mml_kd_m_ca1 mml kd m _
ggo_kd_f_ca1 ggo kd f _
mml_kd_f_ca1 mml kd f _
ptr_kd_m_ca1 ptr kd m _
ggo_kd_m_ca1 ggo kd m _
hsa_kd_f_ca1 hsa kd f _
hsa_kd_m2_ca1 hsa kd m 2
hsa_kd_m1_ca1 hsa kd m 1

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© 2008-2010 Computational Biology Group, Department of Medical Genetics, University of Lausanne, Switzerland