Under-expression is coded with green,
over-expression with red color.
cell cycle
The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division.
biological_process
Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
cellular process
Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level.
all
NA
intracellular
The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
cellular_component
The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together.
cell
The basic structural and functional unit of all organisms. Includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope.
spindle
The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart.
kinetochore microtubule
Any of the spindle microtubules that attach to the kinetochores of chromosomes by their plus ends, and maneuver the chromosomes during mitotic or meiotic chromosome segregation.
cytoskeleton
Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles.
microtubule
Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle.
spindle microtubule
Any microtubule that is part of a mitotic or meiotic spindle; anchored at one spindle pole.
microtubule cytoskeleton
The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins.
macromolecular complex
A stable assembly of two or more macromolecules, i.e. proteins, nucleic acids, carbohydrates or lipids, in which the constituent parts function together.
organelle
Organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, and prokaryotic structures such as anammoxosomes and pirellulosomes. Excludes the plasma membrane.
non-membrane-bounded organelle
Organized structure of distinctive morphology and function, not bounded by a lipid bilayer membrane. Includes ribosomes, the cytoskeleton and chromosomes.
intracellular organelle
Organized structure of distinctive morphology and function, occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane.
intracellular non-membrane-bounded organelle
Organized structure of distinctive morphology and function, not bounded by a lipid bilayer membrane and occurring within the cell. Includes ribosomes, the cytoskeleton and chromosomes.
protein complex
Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or other small molecules.
organelle part
Any constituent part of an organelle, an organized structure of distinctive morphology and function. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, but excludes the plasma membrane.
intracellular part
Any constituent part of the living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
cytoskeletal part
Any constituent part of the cytoskeleton, a cellular scaffolding or skeleton that maintains cell shape, enables some cell motion (using structures such as flagella and cilia), and plays important roles in both intra-cellular transport (e.g. the movement of vesicles and organelles) and cellular division. Includes constituent parts of intermediate filaments, microfilaments, microtubules, and the microtrabecular lattice.
intracellular organelle part
A constituent part of an intracellular organelle, an organized structure of distinctive morphology and function, occurring within the cell. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton but excludes the plasma membrane.
cell part
Any constituent part of a cell, the basic structural and functional unit of all organisms.
all
NA
cell part
Any constituent part of a cell, the basic structural and functional unit of all organisms.
organelle part
Any constituent part of an organelle, an organized structure of distinctive morphology and function. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, but excludes the plasma membrane.
intracellular non-membrane-bounded organelle
Organized structure of distinctive morphology and function, not bounded by a lipid bilayer membrane and occurring within the cell. Includes ribosomes, the cytoskeleton and chromosomes.
intracellular organelle part
A constituent part of an intracellular organelle, an organized structure of distinctive morphology and function, occurring within the cell. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton but excludes the plasma membrane.
intracellular part
Any constituent part of the living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
intracellular organelle
Organized structure of distinctive morphology and function, occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane.
intracellular organelle part
A constituent part of an intracellular organelle, an organized structure of distinctive morphology and function, occurring within the cell. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton but excludes the plasma membrane.
spindle
The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart.
microtubule
Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle.
spindle microtubule
Any microtubule that is part of a mitotic or meiotic spindle; anchored at one spindle pole.
cytoskeletal part
Any constituent part of the cytoskeleton, a cellular scaffolding or skeleton that maintains cell shape, enables some cell motion (using structures such as flagella and cilia), and plays important roles in both intra-cellular transport (e.g. the movement of vesicles and organelles) and cellular division. Includes constituent parts of intermediate filaments, microfilaments, microtubules, and the microtrabecular lattice.
spindle
The array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during mitosis or meiosis and serves to move the duplicated chromosomes apart.
microtubule
Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle.
ADAD1adenosine deaminase domain containing 1 (testis-specific) (ENSG00000164113), score: 0.71 ARHGAP28Rho GTPase activating protein 28 (ENSG00000088756), score: 0.78 ARMC4armadillo repeat containing 4 (ENSG00000169126), score: 0.73 BARX1BARX homeobox 1 (ENSG00000131668), score: 0.72 BOLLbol, boule-like (Drosophila) (ENSG00000152430), score: 0.72 BRIP1BRCA1 interacting protein C-terminal helicase 1 (ENSG00000136492), score: 0.82 BTG4B-cell translocation gene 4 (ENSG00000137707), score: 0.8 C10orf96chromosome 10 open reading frame 96 (ENSG00000182645), score: 0.76 CCDC83coiled-coil domain containing 83 (ENSG00000150676), score: 0.75 CLCA2chloride channel accessory 2 (ENSG00000137975), score: 1 DDX20DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 (ENSG00000064703), score: 0.7 DNAJC5BDnaJ (Hsp40) homolog, subfamily C, member 5 beta (ENSG00000147570), score: 0.74 DTLdenticleless homolog (Drosophila) (ENSG00000143476), score: 0.77 DYDC1DPY30 domain containing 1 (ENSG00000170788), score: 0.75 FAM194Afamily with sequence similarity 194, member A (ENSG00000163645), score: 0.7 FAM81Bfamily with sequence similarity 81, member B (ENSG00000153347), score: 0.7 GJA8gap junction protein, alpha 8, 50kDa (ENSG00000121634), score: 0.81 GMPSguanine monphosphate synthetase (ENSG00000163655), score: 0.72 GSG1germ cell associated 1 (ENSG00000111305), score: 0.84 HOXA13homeobox A13 (ENSG00000106031), score: 0.71 HSF2BPheat shock transcription factor 2 binding protein (ENSG00000160207), score: 0.74 IFT88intraflagellar transport 88 homolog (Chlamydomonas) (ENSG00000032742), score: 0.71 KIF18Akinesin family member 18A (ENSG00000121621), score: 0.75 KNTC1kinetochore associated 1 (ENSG00000184445), score: 0.72 LASS3LAG1 homolog, ceramide synthase 3 (ENSG00000154227), score: 0.83 LOC81691exonuclease NEF-sp (ENSG00000005189), score: 0.84 LOXHD1lipoxygenase homology domains 1 (ENSG00000167210), score: 0.75 LRIT1leucine-rich repeat, immunoglobulin-like and transmembrane domains 1 (ENSG00000148602), score: 0.76 LRRCC1leucine rich repeat and coiled-coil domain containing 1 (ENSG00000133739), score: 0.72 MC2Rmelanocortin 2 receptor (adrenocorticotropic hormone) (ENSG00000185231), score: 0.92 MYO15Amyosin XVA (ENSG00000091536), score: 0.7 NEK2NIMA (never in mitosis gene a)-related kinase 2 (ENSG00000117650), score: 0.71 PPM1Gprotein phosphatase, Mg2+/Mn2+ dependent, 1G (ENSG00000115241), score: 0.77 PRTGprotogenin (ENSG00000166450), score: 0.86 RAE1RAE1 RNA export 1 homolog (S. pombe) (ENSG00000101146), score: 0.77 RNF141ring finger protein 141 (ENSG00000110315), score: 0.72 RTKN2rhotekin 2 (ENSG00000182010), score: 0.72 SERPINB5serpin peptidase inhibitor, clade B (ovalbumin), member 5 (ENSG00000206075), score: 0.77 SPATA17spermatogenesis associated 17 (ENSG00000162814), score: 0.71 TMEM215transmembrane protein 215 (ENSG00000188133), score: 0.8 TTC29tetratricopeptide repeat domain 29 (ENSG00000137473), score: 0.73 USP6NLUSP6 N-terminal like (ENSG00000148429), score: 0.71
| Id | species | tissue | sex | individual |
|---|---|---|---|---|
| hsa_ts_m2_ca1 | hsa | ts | m | 2 |
| ggo_ts_m_ca1 | ggo | ts | m | _ |
| mml_ts_m1_ca1 | mml | ts | m | 1 |
| mml_ts_m2_ca1 | mml | ts | m | 2 |
| ppa_ts_m_ca1 | ppa | ts | m | _ |
| ptr_ts_m_ca1 | ptr | ts | m | _ |
