Previous module | Next module Module #94, TG: 2.8, TC: 2.6, 42 probes, 42 Entrez genes, 7 conditions

Help | Hide | Top Expression data


Expression data for module #94

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Under-expression is coded with green, over-expression with red color.

Help | Hide | Top The GO tree — Biological processes

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system process

A multicellular organismal process carried out by any of the organs or tissues in an organ system. An organ system is a regularly interacting or interdependent group of organs or tissues that work together to carry out a biological objective.

secretion

The controlled release of a substance by a cell, a group of cells, or a tissue.

transport

The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism by means of some external agent such as a transporter or pore.

excretion

The elimination by an organism of the waste products that arise as a result of metabolic activity. These products include water, carbon dioxide (CO2), and nitrogenous compounds.

biological_process

Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.

multicellular organismal process

Any biological process, occurring at the level of a multicellular organism, pertinent to its function.

localization

Any process by which a cell, a substance, or a cellular entity, such as a protein complex or organelle, is transported to, and/or maintained in a specific location.

establishment of localization

The directed movement of a cell, substance or cellular entity, such as a protein complex or organelle, to a specific location.

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NA

establishment of localization

The directed movement of a cell, substance or cellular entity, such as a protein complex or organelle, to a specific location.

excretion

The elimination by an organism of the waste products that arise as a result of metabolic activity. These products include water, carbon dioxide (CO2), and nitrogenous compounds.

Help | Hide | Top The GO tree — Cellular Components

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plasma membrane

The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

membrane

Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.

integral to membrane

Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane.

cellular_component

The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together.

cell

The basic structural and functional unit of all organisms. Includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope.

apical plasma membrane

The region of the plasma membrane located at the apical end of the cell.

intrinsic to membrane

Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane.

macromolecular complex

A stable assembly of two or more macromolecules, i.e. proteins, nucleic acids, carbohydrates or lipids, in which the constituent parts function together.

ion channel complex

A protein complex that spans a membrane and forms a water-filled channel across the phospholipid bilayer allowing selective ion transport down its electrochemical gradient.

cation channel complex

An ion channel complex through which cations pass.

sodium channel complex

An ion channel complex through which sodium ions pass.

protein complex

Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or other small molecules.

membrane part

Any constituent part of a membrane, a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.

plasma membrane part

Any constituent part of the plasma membrane, the membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

cell part

Any constituent part of a cell, the basic structural and functional unit of all organisms.

apical part of cell

The region of a polarized cell that forms a tip or is distal to a base. For example, in a polarized epithelial cell, the apical region has an exposed surface and lies opposite to the basal lamina that separates the epithelium from other tissue.

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NA

cell part

Any constituent part of a cell, the basic structural and functional unit of all organisms.

membrane part

Any constituent part of a membrane, a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.

ion channel complex

A protein complex that spans a membrane and forms a water-filled channel across the phospholipid bilayer allowing selective ion transport down its electrochemical gradient.

plasma membrane part

Any constituent part of the plasma membrane, the membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

apical plasma membrane

The region of the plasma membrane located at the apical end of the cell.

ion channel complex

A protein complex that spans a membrane and forms a water-filled channel across the phospholipid bilayer allowing selective ion transport down its electrochemical gradient.

Help | Hide | Top The GO tree — Molecular Function

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molecular_function

Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions.

catalytic activity

Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.

metallopeptidase activity

Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.

peptidase activity

Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid.

peptidase activity, acting on L-amino acid peptides

Catalysis of the hydrolysis of peptide bonds formed between L-amino acids.

hydrolase activity

Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.

all

NA

Help | Show | Top GO BP test for over-representation

Help | Show | Top GO CC test for over-representation

Help | Show | Top GO MF test for over-representation

Help | Hide | Top KEGG Pathway test for over-representation

Id Pvalue ExpCount Count Size Term
04960 6.242e-04 0.1351 4
16 Aldosterone-regulated sodium reabsorption

Help | Hide | Top miRNA test for over-representation

No enriched terms

Help | Hide | Top Chromosome test for over-representation

No enriched terms

Help | Hide | Top Genes

Entrez genes

ACPPacid phosphatase, prostate (ENSG00000014257), score: 0.84 ATP6V0A4ATPase, H+ transporting, lysosomal V0 subunit a4 (ENSG00000105929), score: 0.67 BARX2BARX homeobox 2 (ENSG00000043039), score: 0.8 CA12carbonic anhydrase XII (ENSG00000074410), score: 0.73 CRYAAcrystallin, alpha A (ENSG00000160202), score: 1 DPEP1dipeptidase 1 (renal) (ENSG00000015413), score: 0.67 ELF5E74-like factor 5 (ets domain transcription factor) (ENSG00000135374), score: 0.8 F2RL1coagulation factor II (thrombin) receptor-like 1 (ENSG00000164251), score: 0.69 FOXI1forkhead box I1 (ENSG00000168269), score: 0.76 GATA3GATA binding protein 3 (ENSG00000107485), score: 0.69 GPR114G protein-coupled receptor 114 (ENSG00000159618), score: 0.68 GRHL2grainyhead-like 2 (Drosophila) (ENSG00000083307), score: 0.67 HOXA10homeobox A10 (ENSG00000153807), score: 0.74 HSD11B2hydroxysteroid (11-beta) dehydrogenase 2 (ENSG00000176387), score: 0.68 IL1RL1interleukin 1 receptor-like 1 (ENSG00000115602), score: 0.79 ILDR1immunoglobulin-like domain containing receptor 1 (ENSG00000145103), score: 0.68 IMPA2inositol(myo)-1(or 4)-monophosphatase 2 (ENSG00000141401), score: 0.69 KCNJ1potassium inwardly-rectifying channel, subfamily J, member 1 (ENSG00000151704), score: 0.76 LGALS2lectin, galactoside-binding, soluble, 2 (ENSG00000100079), score: 0.67 LMX1BLIM homeobox transcription factor 1, beta (ENSG00000136944), score: 0.86 MMP7matrix metallopeptidase 7 (matrilysin, uterine) (ENSG00000137673), score: 0.95 NOX4NADPH oxidase 4 (ENSG00000086991), score: 0.71 NPHS2nephrosis 2, idiopathic, steroid-resistant (podocin) (ENSG00000116218), score: 0.84 OVCH2ovochymase 2 (gene/pseudogene) (ENSG00000183378), score: 0.89 PAPPA2pappalysin 2 (ENSG00000116183), score: 0.7 PEPDpeptidase D (ENSG00000124299), score: 0.68 PLCG2phospholipase C, gamma 2 (phosphatidylinositol-specific) (ENSG00000197943), score: 0.71 PROM2prominin 2 (ENSG00000155066), score: 0.77 RHCGRh family, C glycoprotein (ENSG00000140519), score: 0.72 SCNN1Asodium channel, nonvoltage-gated 1 alpha (ENSG00000111319), score: 0.69 SCNN1Bsodium channel, nonvoltage-gated 1, beta (ENSG00000168447), score: 0.68 SIM2single-minded homolog 2 (Drosophila) (ENSG00000159263), score: 0.72 SLC15A1solute carrier family 15 (oligopeptide transporter), member 1 (ENSG00000088386), score: 0.71 SLC26A7solute carrier family 26, member 7 (ENSG00000147606), score: 0.71 SLC5A12solute carrier family 5 (sodium/glucose cotransporter), member 12 (ENSG00000148942), score: 0.67 STK32Bserine/threonine kinase 32B (ENSG00000152953), score: 0.73 TFCP2L1transcription factor CP2-like 1 (ENSG00000115112), score: 0.76 TMPRSS4transmembrane protease, serine 4 (ENSG00000137648), score: 0.83 TRPV4transient receptor potential cation channel, subfamily V, member 4 (ENSG00000111199), score: 0.68 VCAM1vascular cell adhesion molecule 1 (ENSG00000162692), score: 0.67 WDR72WD repeat domain 72 (ENSG00000166415), score: 0.71 XPNPEP2X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound (ENSG00000122121), score: 0.67

Non-Entrez genes

Unknown, score:

Help | Hide | Top Conditions

Id species tissue sex individual
ppa_kd_m_ca1 ppa kd m _
ptr_kd_m_ca1 ptr kd m _
ptr_kd_f_ca1 ptr kd f _
ppa_kd_f_ca1 ppa kd f _
hsa_kd_f_ca1 hsa kd f _
hsa_kd_m1_ca1 hsa kd m 1
hsa_kd_m2_ca1 hsa kd m 2

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