Revision as of 18:56, 19 January 2012

2011

<biblio>

1. hersch2011 Hersch M, Billard A, Bergmann S. Iterative Estimation of Rigid Body Transformations - Application to robust object tracking and Iterative Closest Point. Journal of Mathematical Imaging and Vision. 2011 link ICP software

</biblio>

2010

2009

Corinne Berthonneche, Bastian Peter, Fanny Schüpfer, Pamela Hayoz, Zoltán Kutalik, Hugues Abriel, Thierry Pedrazzini, Jacques S Beckmann, Sven Bergmann, Fabienne Maurer
Cardiovascular response to beta-adrenergic blockade or activation in 23 inbred mouse strains.
PLoS ONE: 2009, 4(8);e6610
[PubMed:19672458] [WorldCat.org] [DOI]

M Sévin, Z Kutalik, S Bergman, M Vercelletto, P Renou, E Lamy, F J Vingerhoets, G Di Virgilio, P Boisseau, S Bezieau, L Pasquier, J-M Rival, J S Beckmann, P Damier, S Jacquemont
Penetrance of marked cognitive impairment in older male carriers of the FMR1 gene premutation.
J. Med. Genet.: 2009, 46(12);818-24
[PubMed:19542082] [WorldCat.org] [DOI]

Melanie Kolz, Toby Johnson, Serena Sanna, Alexander Teumer, Veronique Vitart, Markus Perola, Massimo Mangino, Eva Albrecht, Chris Wallace, Martin Farrall, Asa Johansson, Dale R Nyholt, Yurii Aulchenko, Jacques S Beckmann, Sven Bergmann, Murielle Bochud, Morris Brown, Harry Campbell, EUROSPAN Consortium, John Connell, Anna Dominiczak, Georg Homuth, Claudia Lamina, Mark I McCarthy, ENGAGE Consortium, Thomas Meitinger, Vincent Mooser, Patricia Munroe, Matthias Nauck, John Peden, Holger Prokisch, Perttu Salo, Veikko Salomaa, Nilesh J Samani, David Schlessinger, Manuela Uda, Uwe Völker, Gérard Waeber, Dawn Waterworth, Rui Wang-Sattler, Alan F Wright, Jerzy Adamski, John B Whitfield, Ulf Gyllensten, James F Wilson, Igor Rudan, Peter Pramstaller, Hugh Watkins, PROCARDIS Consortium, Angela Doering, H-Erich Wichmann, KORA Study, Tim D Spector, Leena Peltonen, Henry Völzke, Ramaiah Nagaraja, Peter Vollenweider, Mark Caulfield, WTCCC, Thomas Illig, Christian Gieger
Meta-analysis of 28,141 individuals identifies common variants within five new loci that influence uric acid concentrations.
PLoS Genet.: 2009, 5(6);e1000504
[PubMed:19503597] [WorldCat.org] [DOI]

Christopher Newton-Cheh, Toby Johnson, Vesela Gateva, Martin D Tobin, Murielle Bochud, Lachlan Coin, Samer S Najjar, Jing Hua Zhao, Simon C Heath, Susana Eyheramendy, Konstantinos Papadakis, Benjamin F Voight, Laura J Scott, Feng Zhang, Martin Farrall, Toshiko Tanaka, Chris Wallace, John C Chambers, Kay-Tee Khaw, Peter Nilsson, Pim van der Harst, Silvia Polidoro, Diederick E Grobbee, N Charlotte Onland-Moret, Michiel L Bots, Louise V Wain, Katherine S Elliott, Alexander Teumer, Jian'an Luan, Gavin Lucas, Johanna Kuusisto, Paul R Burton, David Hadley, Wendy L McArdle, Wellcome Trust Case Control Consortium, Morris Brown, Anna Dominiczak, Stephen J Newhouse, Nilesh J Samani, John Webster, Eleftheria Zeggini, Jacques S Beckmann, Sven Bergmann, Noha Lim, Kijoung Song, Peter Vollenweider, Gerard Waeber, Dawn M Waterworth, Xin Yuan, Leif Groop, Marju Orho-Melander, Alessandra Allione, Alessandra Di Gregorio, Simonetta Guarrera, Salvatore Panico, Fulvio Ricceri, Valeria Romanazzi, Carlotta Sacerdote, Paolo Vineis, Inês Barroso, Manjinder S Sandhu, Robert N Luben, Gabriel J Crawford, Pekka Jousilahti, Markus Perola, Michael Boehnke, Lori L Bonnycastle, Francis S Collins, Anne U Jackson, Karen L Mohlke, Heather M Stringham, Timo T Valle, Cristen J Willer, Richard N Bergman, Mario A Morken, Angela Döring, Christian Gieger, Thomas Illig, Thomas Meitinger, Elin Org, Arne Pfeufer, H Erich Wichmann, Sekar Kathiresan, Jaume Marrugat, Christopher J O'Donnell, Stephen M Schwartz, David S Siscovick, Isaac Subirana, Nelson B Freimer, Anna-Liisa Hartikainen, Mark I McCarthy, Paul F O'Reilly, Leena Peltonen, Anneli Pouta, Paul E de Jong, Harold Snieder, Wiek H van Gilst, Robert Clarke, Anuj Goel, Anders Hamsten, John F Peden, Udo Seedorf, Ann-Christine Syvänen, Giovanni Tognoni, Edward G Lakatta, Serena Sanna, Paul Scheet, David Schlessinger, Angelo Scuteri, Marcus Dörr, Florian Ernst, Stephan B Felix, Georg Homuth, Roberto Lorbeer, Thorsten Reffelmann, Rainer Rettig, Uwe Völker, Pilar Galan, Ivo G Gut, Serge Hercberg, G Mark Lathrop, Diana Zelenika, Panos Deloukas, Nicole Soranzo, Frances M Williams, Guangju Zhai, Veikko Salomaa, Markku Laakso, Roberto Elosua, Nita G Forouhi, Henry Völzke, Cuno S Uiterwaal, Yvonne T van der Schouw, Mattijs E Numans, Giuseppe Matullo, Gerjan Navis, Göran Berglund, Sheila A Bingham, Jaspal S Kooner, John M Connell, Stefania Bandinelli, Luigi Ferrucci, Hugh Watkins, Tim D Spector, Jaakko Tuomilehto, David Altshuler, David P Strachan, Maris Laan, Pierre Meneton, Nicholas J Wareham, Manuela Uda, Marjo-Riitta Jarvelin, Vincent Mooser, Olle Melander, Ruth J F Loos, Paul Elliott, Gonçalo R Abecasis, Mark Caulfield, Patricia B Munroe
Genome-wide association study identifies eight loci associated with blood pressure.
Nat. Genet.: 2009, 41(6);666-76
[PubMed:19430483] [WorldCat.org] [DOI]

X Lin, K Song, N Lim, X Yuan, T Johnson, A Abderrahmani, P Vollenweider, H Stirnadel, S S Sundseth, E Lai, D K Burns, L T Middleton, A D Roses, P M Matthews, G Waeber, L Cardon, D M Waterworth, V Mooser
Risk prediction of prevalent diabetes in a Swiss population using a weighted genetic score--the CoLaus Study.
Diabetologia: 2009, 52(4);600-8
[PubMed:19139842] [WorldCat.org] [DOI]

Cristen J Willer, Elizabeth K Speliotes, Ruth J F Loos, Shengxu Li, Cecilia M Lindgren, Iris M Heid, Sonja I Berndt, Amanda L Elliott, Anne U Jackson, Claudia Lamina, Guillaume Lettre, Noha Lim, Helen N Lyon, Steven A McCarroll, Konstantinos Papadakis, Lu Qi, Joshua C Randall, Rosa Maria Roccasecca, Serena Sanna, Paul Scheet, Michael N Weedon, Eleanor Wheeler, Jing Hua Zhao, Leonie C Jacobs, Inga Prokopenko, Nicole Soranzo, Toshiko Tanaka, Nicholas J Timpson, Peter Almgren, Amanda Bennett, Richard N Bergman, Sheila A Bingham, Lori L Bonnycastle, Morris Brown, Noël P Burtt, Peter Chines, Lachlan Coin, Francis S Collins, John M Connell, Cyrus Cooper, George Davey Smith, Elaine M Dennison, Parimal Deodhar, Paul Elliott, Michael R Erdos, Karol Estrada, David M Evans, Lauren Gianniny, Christian Gieger, Christopher J Gillson, Candace Guiducci, Rachel Hackett, David Hadley, Alistair S Hall, Aki S Havulinna, Johannes Hebebrand, Albert Hofman, Bo Isomaa, Kevin B Jacobs, Toby Johnson, Pekka Jousilahti, Zorica Jovanovic, Kay-Tee Khaw, Peter Kraft, Mikko Kuokkanen, Johanna Kuusisto, Jaana Laitinen, Edward G Lakatta, Jian'an Luan, Robert N Luben, Massimo Mangino, Wendy L McArdle, Thomas Meitinger, Antonella Mulas, Patricia B Munroe, Narisu Narisu, Andrew R Ness, Kate Northstone, Stephen O'Rahilly, Carolin Purmann, Matthew G Rees, Martin Ridderstråle, Susan M Ring, Fernando Rivadeneira, Aimo Ruokonen, Manjinder S Sandhu, Jouko Saramies, Laura J Scott, Angelo Scuteri, Kaisa Silander, Matthew A Sims, Kijoung Song, Jonathan Stephens, Suzanne Stevens, Heather M Stringham, Y C Loraine Tung, Timo T Valle, Cornelia M Van Duijn, Karani S Vimaleswaran, Peter Vollenweider, Gerard Waeber, Chris Wallace, Richard M Watanabe, Dawn M Waterworth, Nicholas Watkins, Wellcome Trust Case Control Consortium, Jacqueline C M Witteman, Eleftheria Zeggini, Guangju Zhai, M Carola Zillikens, David Altshuler, Mark J Caulfield, Stephen J Chanock, I Sadaf Farooqi, Luigi Ferrucci, Jack M Guralnik, Andrew T Hattersley, Frank B Hu, Marjo-Riitta Jarvelin, Markku Laakso, Vincent Mooser, Ken K Ong, Willem H Ouwehand, Veikko Salomaa, Nilesh J Samani, Timothy D Spector, Tiinamaija Tuomi, Jaakko Tuomilehto, Manuela Uda, André G Uitterlinden, Nicholas J Wareham, Panagiotis Deloukas, Timothy M Frayling, Leif C Groop, Richard B Hayes, David J Hunter, Karen L Mohlke, Leena Peltonen, David Schlessinger, David P Strachan, H-Erich Wichmann, Mark I McCarthy, Michael Boehnke, Inês Barroso, Gonçalo R Abecasis, Joel N Hirschhorn, Genetic Investigation of ANthropometric Traits Consortium
Six new loci associated with body mass index highlight a neuronal influence on body weight regulation.
Nat. Genet.: 2009, 41(1);25-34
[PubMed:19079261] [WorldCat.org] [DOI]

Inga Prokopenko, Claudia Langenberg, Jose C Florez, Richa Saxena, Nicole Soranzo, Gudmar Thorleifsson, Ruth J F Loos, Alisa K Manning, Anne U Jackson, Yurii Aulchenko, Simon C Potter, Michael R Erdos, Serena Sanna, Jouke-Jan Hottenga, Eleanor Wheeler, Marika Kaakinen, Valeriya Lyssenko, Wei-Min Chen, Kourosh Ahmadi, Jacques S Beckmann, Richard N Bergman, Murielle Bochud, Lori L Bonnycastle, Thomas A Buchanan, Antonio Cao, Alessandra Cervino, Lachlan Coin, Francis S Collins, Laura Crisponi, Eco J C de Geus, Abbas Dehghan, Panos Deloukas, Alex S F Doney, Paul Elliott, Nelson Freimer, Vesela Gateva, Christian Herder, Albert Hofman, Thomas E Hughes, Sarah Hunt, Thomas Illig, Michael Inouye, Bo Isomaa, Toby Johnson, Augustine Kong, Maria Krestyaninova, Johanna Kuusisto, Markku Laakso, Noha Lim, Ulf Lindblad, Cecilia M Lindgren, Owen T McCann, Karen L Mohlke, Andrew D Morris, Silvia Naitza, Marco Orrù, Colin N A Palmer, Anneli Pouta, Joshua Randall, Wolfgang Rathmann, Jouko Saramies, Paul Scheet, Laura J Scott, Angelo Scuteri, Stephen Sharp, Eric Sijbrands, Jan H Smit, Kijoung Song, Valgerdur Steinthorsdottir, Heather M Stringham, Tiinamaija Tuomi, Jaakko Tuomilehto, André G Uitterlinden, Benjamin F Voight, Dawn Waterworth, H-Erich Wichmann, Gonneke Willemsen, Jacqueline C M Witteman, Xin Yuan, Jing Hua Zhao, Eleftheria Zeggini, David Schlessinger, Manjinder Sandhu, Dorret I Boomsma, Manuela Uda, Tim D Spector, Brenda Wjh Penninx, David Altshuler, Peter Vollenweider, Marjo Riitta Jarvelin, Edward Lakatta, Gerard Waeber, Caroline S Fox, Leena Peltonen, Leif C Groop, Vincent Mooser, L Adrienne Cupples, Unnur Thorsteinsdottir, Michael Boehnke, Inês Barroso, Cornelia Van Duijn, Josée Dupuis, Richard M Watanabe, Kari Stefansson, Mark I McCarthy, Nicholas J Wareham, James B Meigs, Gonçalo R Abecasis
Variants in MTNR1B influence fasting glucose levels.
Nat. Genet.: 2009, 41(1);77-81
[PubMed:19060907] [WorldCat.org] [DOI]

2008

Xin Yuan, Dawn Waterworth, John R B Perry, Noha Lim, Kijoung Song, John C Chambers, Weihua Zhang, Peter Vollenweider, Heide Stirnadel, Toby Johnson, Sven Bergmann, Noam D Beckmann, Yun Li, Luigi Ferrucci, David Melzer, Dena Hernandez, Andrew Singleton, James Scott, Paul Elliott, Gerard Waeber, Lon Cardon, Timothy M Frayling, Jaspal S Kooner, Vincent Mooser
Population-based genome-wide association studies reveal six loci influencing plasma levels of liver enzymes.
Am. J. Hum. Genet.: 2008, 83(4);520-8
[PubMed:18940312] [WorldCat.org] [DOI]

John Novembre, Toby Johnson, Katarzyna Bryc, Zoltán Kutalik, Adam R Boyko, Adam Auton, Amit Indap, Karen S King, Sven Bergmann, Matthew R Nelson, Matthew Stephens, Carlos D Bustamante
Genes mirror geography within Europe.
Nature: 2008, 456(7218);98-101
[PubMed:18758442] [WorldCat.org] [DOI]

Murielle Bochud, Chin B Eap, Marc Maillard, Toby Johnson, Peter Vollenweider, Pascal Bovet, Robert C Elston, Sven Bergmann, Jacques S Beckmann, Dawn M Waterworth, Vincent Mooser, Anne Gabriel, Michel Burnier
Association of ABCB1 genetic variants with renal function in Africans and in Caucasians.
BMC Med Genomics: 2008, 1();21
[PubMed:18518969] [WorldCat.org] [DOI]

Zoltán Kutalik, Jacques S Beckmann, Sven Bergmann
A modular approach for integrative analysis of large-scale gene-expression and drug-response data.
Nat. Biotechnol.: 2008, 26(5);531-9
[PubMed:18464786] [WorldCat.org] [DOI]

Ruth J F Loos, Cecilia M Lindgren, Shengxu Li, Eleanor Wheeler, Jing Hua Zhao, Inga Prokopenko, Michael Inouye, Rachel M Freathy, Antony P Attwood, Jacques S Beckmann, Sonja I Berndt, Prostate, Lung, Colorectal, and Ovarian (PLCO) Cancer Screening Trial, Kevin B Jacobs, Stephen J Chanock, Richard B Hayes, Sven Bergmann, Amanda J Bennett, Sheila A Bingham, Murielle Bochud, Morris Brown, Stéphane Cauchi, John M Connell, Cyrus Cooper, George Davey Smith, Ian Day, Christian Dina, Subhajyoti De, Emmanouil T Dermitzakis, Alex S F Doney, Katherine S Elliott, Paul Elliott, David M Evans, I Sadaf Farooqi, Philippe Froguel, Jilur Ghori, Christopher J Groves, Rhian Gwilliam, David Hadley, Alistair S Hall, Andrew T Hattersley, Johannes Hebebrand, Iris M Heid, KORA, Claudia Lamina, Christian Gieger, Thomas Illig, Thomas Meitinger, H-Erich Wichmann, Blanca Herrera, Anke Hinney, Sarah E Hunt, Marjo-Riitta Jarvelin, Toby Johnson, Jennifer D M Jolley, Fredrik Karpe, Andrew Keniry, Kay-Tee Khaw, Robert N Luben, Massimo Mangino, Jonathan Marchini, Wendy L McArdle, Ralph McGinnis, David Meyre, Patricia B Munroe, Andrew D Morris, Andrew R Ness, Matthew J Neville, Alexandra C Nica, Ken K Ong, Stephen O'Rahilly, Katharine R Owen, Colin N A Palmer, Konstantinos Papadakis, Simon Potter, Anneli Pouta, Lu Qi, Nurses' Health Study, Joshua C Randall, Nigel W Rayner, Susan M Ring, Manjinder S Sandhu, André Scherag, Matthew A Sims, Kijoung Song, Nicole Soranzo, Elizabeth K Speliotes, Diabetes Genetics Initiative, Holly E Syddall, Sarah A Teichmann, Nicholas J Timpson, Jonathan H Tobias, Manuela Uda, SardiNIA Study, Carla I Ganz Vogel, Chris Wallace, Dawn M Waterworth, Michael N Weedon, Wellcome Trust Case Control Consortium, Cristen J Willer, FUSION, Wraight, Xin Yuan, Eleftheria Zeggini, Joel N Hirschhorn, David P Strachan, Willem H Ouwehand, Mark J Caulfield, Nilesh J Samani, Timothy M Frayling, Peter Vollenweider, Gerard Waeber, Vincent Mooser, Panos Deloukas, Mark I McCarthy, Nicholas J Wareham, Inês Barroso, Kevin B Jacobs, Stephen J Chanock, Richard B Hayes, Claudia Lamina, Christian Gieger, Thomas Illig, Thomas Meitinger, H-Erich Wichmann, Peter Kraft, Susan E Hankinson, David J Hunter, Frank B Hu, Helen N Lyon, Benjamin F Voight, Martin Ridderstrale, Leif Groop, Paul Scheet, Serena Sanna, Goncalo R Abecasis, Giuseppe Albai, Ramaiah Nagaraja, David Schlessinger, Anne U Jackson, Jaakko Tuomilehto, Francis S Collins, Michael Boehnke, Karen L Mohlke
Common variants near MC4R are associated with fat mass, weight and risk of obesity.
Nat. Genet.: 2008, 40(6);768-75
[PubMed:18454148] [WorldCat.org] [DOI]

Michael N Weedon, Hana Lango, Cecilia M Lindgren, Chris Wallace, David M Evans, Massimo Mangino, Rachel M Freathy, John R B Perry, Suzanne Stevens, Alistair S Hall, Nilesh J Samani, Beverly Shields, Inga Prokopenko, Martin Farrall, Anna Dominiczak, Diabetes Genetics Initiative, Wellcome Trust Case Control Consortium, Toby Johnson, Sven Bergmann, Jacques S Beckmann, Peter Vollenweider, Dawn M Waterworth, Vincent Mooser, Colin N A Palmer, Andrew D Morris, Willem H Ouwehand, Cambridge GEM Consortium, Jing Hua Zhao, Shengxu Li, Ruth J F Loos, Inês Barroso, Panagiotis Deloukas, Manjinder S Sandhu, Eleanor Wheeler, Nicole Soranzo, Michael Inouye, Nicholas J Wareham, Mark Caulfield, Patricia B Munroe, Andrew T Hattersley, Mark I McCarthy, Timothy M Frayling
Genome-wide association analysis identifies 20 loci that influence adult height.
Nat. Genet.: 2008, 40(5);575-83
[PubMed:18391952] [WorldCat.org] [DOI]

Manjinder S Sandhu, Dawn M Waterworth, Sally L Debenham, Eleanor Wheeler, Konstantinos Papadakis, Jing Hua Zhao, Kijoung Song, Xin Yuan, Toby Johnson, Sofie Ashford, Michael Inouye, Robert Luben, Matthew Sims, David Hadley, Wendy McArdle, Philip Barter, Y Antero Kesäniemi, Robert W Mahley, Ruth McPherson, Scott M Grundy, Wellcome Trust Case Control Consortium, Sheila A Bingham, Kay-Tee Khaw, Ruth J F Loos, Gérard Waeber, Inês Barroso, David P Strachan, Panagiotis Deloukas, Peter Vollenweider, Nicholas J Wareham, Vincent Mooser
LDL-cholesterol concentrations: a genome-wide association study.
Lancet: 2008, 371(9611);483-91
[PubMed:18262040] [WorldCat.org] [DOI]

Sven Bergmann, Zvi Tamari, Eyal Schejter, Ben-Zion Shilo, Naama Barkai
Re-examining the stability of the Bicoid morphogen gradient.
Cell: 2008, 132(1);15-7; author reply 17-8
[PubMed:18191212] [WorldCat.org] [DOI]

2007

2006

Orly Reiner, Frédéric M Coquelle, Bastian Peter, Talia Levy, Anna Kaplan, Tamar Sapir, Irit Orr, Naama Barkai, Gregor Eichele, Sven Bergmann
The evolving doublecortin (DCX) superfamily.
BMC Genomics: 2006, 7();188
[PubMed:16869982] [WorldCat.org] [DOI]

Frédéric M Coquelle, Talia Levy, Sven Bergmann, Sharon Grayer Wolf, Daniela Bar-El, Tamar Sapir, Yehuda Brody, Irit Orr, Naama Barkai, Gregor Eichele, Orly Reiner
Common and divergent roles for members of the mouse DCX superfamily.
Cell Cycle: 2006, 5(9);976-83
[PubMed:16628014] [WorldCat.org]

2005

2004

Jan H Ihmels, Sven Bergmann
Challenges and prospects in the analysis of large-scale gene expression data.
Brief. Bioinformatics: 2004, 5(4);313-27
[PubMed:15606968] [WorldCat.org]

Jan Ihmels, Sven Bergmann, Naama Barkai
Defining transcription modules using large-scale gene expression data.
Bioinformatics: 2004, 20(13);1993-2003
[PubMed:15044247] [WorldCat.org] [DOI]

Sven Bergmann, Jan Ihmels, Naama Barkai
Similarities and differences in genome-wide expression data of six organisms.
PLoS Biol.: 2004, 2(1);E9
[PubMed:14737187] [WorldCat.org] [DOI]

2003

Sven Bergmann, Jan Ihmels, Naama Barkai
Iterative signature algorithm for the analysis of large-scale gene expression data.
Phys Rev E Stat Nonlin Soft Matter Phys: 2003, 67(3 Pt 1);031902
[PubMed:12689096] [WorldCat.org]

2002

Jan Ihmels, Gilgi Friedlander, Sven Bergmann, Ofer Sarig, Yaniv Ziv, Naama Barkai
Revealing modular organization in the yeast transcriptional network.
Nat. Genet.: 2002, 31(4);370-7
[PubMed:12134151] [WorldCat.org] [DOI]