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Show new changes starting from 14:03, 3 June 2024
   

3 June 2024

N    14:00  Classify Rab proteins (GTPases) using ML approach‎‎ (3 changes | history) . . (+630)‎ . . [Biomath2024 2‎ (3×)]
      14:00 (cur | prev) . . (+43)‎ . . Biomath2024 2 (talk | contribs)
      13:56 (cur | prev) . . (+79)‎ . . Biomath2024 2 (talk | contribs)
N     13:55 (cur | prev) . . (+508)‎ . . Biomath2024 2 (talk | contribs) (Created page with "Our project aimed to build a classifier for the Rab proteins. We tried 3 machine learning methods: k nearest neighbour, decision tree, random forest. To use them We translated...")
     13:56  UNIL BSc course: Solving Biological Problems that require Math 2024‎‎ (5 changes | history) . . (-52)‎ . . [Biomath2024 2‎; Biomath2024 1‎ (4×)]
      13:56 (cur | prev) . . (-139)‎ . . Biomath2024 2 (talk | contribs)
      11:44 (cur | prev) . . (-3)‎ . . Biomath2024 1 (talk | contribs) (→‎Projects wiki)
      11:44 (cur | prev) . . (+69)‎ . . Biomath2024 1 (talk | contribs) (→‎Projects wiki)
      11:42 (cur | prev) . . (0)‎ . . Biomath2024 1 (talk | contribs)
      11:41 (cur | prev) . . (+21)‎ . . Biomath2024 1 (talk | contribs)
     13:55  UNIL BSc course: Bioinformatics Projects 2024‎‎ (4 changes | history) . . (+261)‎ . . [Biomath2024 2‎; Biomath2024 1‎ (3×)]
      13:55 (cur | prev) . . (+80)‎ . . Biomath2024 2 (talk | contribs)
      11:13 (cur | prev) . . (+78)‎ . . Biomath2024 1 (talk | contribs) (→‎Projects wiki)
      10:59 (cur | prev) . . (+35)‎ . . Biomath2024 1 (talk | contribs) (→‎Projects wiki)
      10:57 (cur | prev) . . (+68)‎ . . Biomath2024 1 (talk | contribs) (→‎Projects wiki)
N    13:18  HMM based classification for conserved SNARE protein domains‎‎ (12 changes | history) . . (+2,676)‎ . . [Biomath2024 1‎ (12×)]
      13:18 (cur | prev) . . (+590)‎ . . Biomath2024 1 (talk | contribs)
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N     10:57 (cur | prev) . . (+1)‎ . . Biomath2024 1 (talk | contribs) (Created page with "l")
N    12:54  Automated Pupil Data Recosntruction using DL‎‎ (18 changes | history) . . (+1,587)‎ . . [Biomath2024 1‎ (18×)]
      12:54 (cur | prev) . . (+21)‎ . . Biomath2024 1 (talk | contribs) (→‎Presentation Slides)
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      11:37 (cur | prev) . . (+134)‎ . . Biomath2024 1 (talk | contribs) (→‎Presentation)
      11:31 (cur | prev) . . (-135)‎ . . Biomath2024 1 (talk | contribs) (→‎Abstract)
      11:30 (cur | prev) . . (-2)‎ . . Biomath2024 1 (talk | contribs) (→‎For more information, please contact us at:)
      11:30 (cur | prev) . . (+86)‎ . . Biomath2024 1 (talk | contribs)
      11:29 (cur | prev) . . (+12)‎ . . Biomath2024 1 (talk | contribs) (→‎Abstract)
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      11:27 (cur | prev) . . (+1,541)‎ . . Biomath2024 1 (talk | contribs) (→‎Abstract)
N     11:20 (cur | prev) . . (+14)‎ . . Biomath2024 1 (talk | contribs) (Created page with "== Abstract ==")
     12:53  (Upload log)‎ . . [Biomath2024 1‎ (6×); Biomath2024 2‎ (14×)]
      12:53 . . Biomath2024 1 (talk | contribs) uploaded File:Press.pptx ‎
      12:51 . . Biomath2024 1 (talk | contribs) uploaded File:SlideVZ1.jpeg ‎
      12:48 . . Biomath2024 1 (talk | contribs) uploaded File:Slide1.jpeg ‎
      12:45 . . Biomath2024 1 (talk | contribs) uploaded File:Presss.pptx ‎
      12:43 . . Biomath2024 1 (talk | contribs) uploaded File:Press.pdf ‎
      12:25 . . Biomath2024 2 (talk | contribs) uploaded File:Models3.png ‎
      12:23 . . Biomath2024 2 (talk | contribs) uploaded File:Models3.10.png ‎
      12:22 . . Biomath2024 2 (talk | contribs) uploaded File:Models2.png ‎
      12:20 . . Biomath2024 2 (talk | contribs) uploaded a new version of File:Models1.png ‎(Accuracy of the different models)
      12:18 . . Biomath2024 2 (talk | contribs) uploaded File:Models1.png ‎(Accuracy of several models,)
      12:12 . . Biomath2024 2 (talk | contribs) uploaded File:Simulation3.png ‎(⇒ p-values < 0.05 : 100%)
      12:08 . . Biomath2024 2 (talk | contribs) uploaded File:Simulation4.png ‎(p-values < 0.05 : 57.7%)
      12:07 . . Biomath2024 2 (talk | contribs) uploaded File:Simualtion3.png ‎(p-values < 0.05 : 100%)
      12:05 . . Biomath2024 2 (talk | contribs) uploaded File:Simulation2.png ‎(p-values < 0.05 : 30.1%)
      12:01 . . Biomath2024 2 (talk | contribs) uploaded File:Simulation1.png ‎(p-values < 0.05: 4.7%)
      11:54 . . Biomath2024 2 (talk | contribs) uploaded File:Formula.png ‎(Formula cage effects)
      11:32 . . Biomath2024 2 (talk | contribs) uploaded File:Graphe Martin.png ‎(Data visualization)
      10:52 . . Biomath2024 1 (talk | contribs) uploaded File:HMM based classification for conserved protein domains (SNARE).pdf ‎
      00:19 . . Biomath2024 2 (talk | contribs) uploaded a new version of File:Recombination landscape models.PNG ‎(Reverted to version as of 23:43, 2 June 2024 (CEST))
      00:05 . . Biomath2024 2 (talk | contribs) uploaded a new version of File:Recombination landscape models.PNG ‎(Hotspots)
     12:25  Which unwanted factors influence laboratory mice?‎‎ (27 changes | history) . . (+769)‎ . . [Biomath2024 2‎ (27×)]
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      12:09 (cur | prev) . . (+81)‎ . . Biomath2024 2 (talk | contribs) (→‎Initial Simulations)
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      12:04 (cur | prev) . . (-1)‎ . . Biomath2024 2 (talk | contribs) (→‎Statistical Analysis)
      12:03 (cur | prev) . . (+108)‎ . . Biomath2024 2 (talk | contribs) (→‎Statistical Analysis)
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     11:43  File:Graphe Martin.png‎ (diff | hist) . . (+293)‎ . . Biomath2024 2 (talk | contribs) (→‎Summary)
N    11:10  Project name‎ (diff | hist) . . (+44)‎ . . Biomath2024 1 (talk | contribs) (Created page with "Automated Pupil Data Recosntruction using DL")
     00:17  Application of Wright-Fisher model for recombination landscapes‎‎ (5 changes | history) . . (+1,308)‎ . . [Biomath2024 2‎ (5×)]
      00:17 (cur | prev) . . (+6)‎ . . Biomath2024 2 (talk | contribs)
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2 June 2024

N    23:50  Application of Wright-Fisher model for recombination landscapes‎‎ (11 changes | history) . . (+10,062)‎ . . [Biomath2024 2‎ (11×)]
      23:50 (cur | prev) . . (+1)‎ . . Biomath2024 2 (talk | contribs)
      23:45 (cur | prev) . . (+74)‎ . . Biomath2024 2 (talk | contribs)
      23:32 (cur | prev) . . (+907)‎ . . Biomath2024 2 (talk | contribs)
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      23:26 (cur | prev) . . (+2,165)‎ . . Biomath2024 2 (talk | contribs)
      22:27 (cur | prev) . . (0)‎ . . Biomath2024 2 (talk | contribs) (→‎Fixed mutations per generation)
      22:24 (cur | prev) . . (+37)‎ . . Biomath2024 2 (talk | contribs)
      22:22 (cur | prev) . . (+9)‎ . . Biomath2024 2 (talk | contribs) (→‎Improvement of the results)
      22:20 (cur | prev) . . (+4)‎ . . Biomath2024 2 (talk | contribs) (→‎Linkage disequilibrium)
      22:19 (cur | prev) . . (+27)‎ . . Biomath2024 2 (talk | contribs) (→‎Recombination landscape)
N     22:15 (cur | prev) . . (+6,823)‎ . . Biomath2024 2 (talk | contribs) (Created page with "== Credits == '''Authors:''' Kasandra Balzaretti, Chiara Bezzola, Milo Arigoni <br> '''Project proposed by:''' Diego Hartasanchez Frenk [...] == Results and discussion == Be...")
     23:43  (Upload log)‎ . . [Biomath2024 2‎ (14×)]
      23:43 . . Biomath2024 2 (talk | contribs) uploaded File:Recombination landscape models.PNG ‎
      22:11 . . Biomath2024 2 (talk | contribs) uploaded File:LD increase population size.png ‎
      22:10 . . Biomath2024 2 (talk | contribs) uploaded File:LD reduce mutation rate.png ‎
      22:05 . . Biomath2024 2 (talk | contribs) uploaded File:Linkage disequilibrium.png ‎
      22:01 . . Biomath2024 2 (talk | contribs) uploaded File:Haplotypes.png ‎
      21:58 . . Biomath2024 2 (talk | contribs) uploaded File:Recombination landscape 2.png ‎
      21:53 . . Biomath2024 2 (talk | contribs) uploaded File:Recombination landscape.png ‎
      21:47 . . Biomath2024 2 (talk | contribs) uploaded File:Starting frequency.png ‎
      21:45 . . Biomath2024 2 (talk | contribs) uploaded File:Alleles frequencies fluctuations.png ‎
      21:39 . . Biomath2024 2 (talk | contribs) uploaded File:SFS distribution.jpg ‎
      21:34 . . Biomath2024 2 (talk | contribs) uploaded File:SFS.png ‎
      21:29 . . Biomath2024 2 (talk | contribs) uploaded File:Fixed mutations formula.png ‎
      21:20 . . Biomath2024 2 (talk | contribs) uploaded File:Fixed mutations per generation.png ‎
      12:12 . . Biomath2024 2 (talk | contribs) uploaded File:Rab classifier.pdf ‎(Our project aimed to build a classifier for the Rab proteins. We tried 3 machine learning methods: k nearest neighbour, decision tree, random forest. To use them We translated our amino acid sequences (source Tracy database of Fassauer Lab) by extracti...)
     20:45  UNIL BSc course: Bioinformatics Projects 2024‎‎ (6 changes | history) . . (+548)‎ . . [Biomath2024 1‎; Biomath2024 2‎ (5×)]
      20:45 (cur | prev) . . (-10)‎ . . Biomath2024 2 (talk | contribs) (→‎Projects wiki)
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N    18:38  Modelling pathways crosstalks as closed walks and cycles on graphs‎ (diff | hist) . . (+92)‎ . . Biomath2024 1 (talk | contribs) (Created page with "==Modelling pathways crosstalk in gene/protein networks as closed walks & cycles on graphs==")
N    18:17  Which unwanted factors influence laboratory mice?‎‎ (10 changes | history) . . (+7,277)‎ . . [Biomath2024 2‎ (10×)]
      18:17 (cur | prev) . . (+23)‎ . . Biomath2024 2 (talk | contribs)
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N     16:45 (cur | prev) . . (+6,585)‎ . . Biomath2024 2 (talk | contribs) (Created page with "Project Title: '''Which unwanted factors influence laboratory mice?''' ''By Leticia Wüthrich and Martin Quintas. ''Supervisor: Frédéric Schütz.'' Link to presentation:...")
N    16:14  Application of Wright-Fisher for recombination landscapes‎ (diff | hist) . . (+83)‎ . . Biomath2024 2 (talk | contribs) (Created page with "'''Introduction''' '''Algorithm''' '''Results and Discussion''' '''Next steps'''")
     14:07  UNIL BSc course: Solving Biological Problems that require Math 2024‎‎ (4 changes | history) . . (+139)‎ . . [Biomath2024 2‎ (4×)]
      14:07 (cur | prev) . . (-12)‎ . . Biomath2024 2 (talk | contribs)
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     12:42  User:Biomath2024 2‎‎ (7 changes | history) . . (+2,727)‎ . . [Biomath2024 2‎ (7×)]
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31 May 2024

N    22:55  Sex differences in retinal vascular properties‎‎ (13 changes | history) . . (+9,406)‎ . . [Biomath2024 1‎ (13×)]
      22:55 (cur | prev) . . (+20)‎ . . Biomath2024 1 (talk | contribs)
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N     22:33 (cur | prev) . . (+9,650)‎ . . Biomath2024 1 (talk | contribs) (Created page with "Ilou Lejeune, Emma Walsh, Juliette Despres Supervisor: Leah Bötgger '''Sex differences in retinal vascular properties With a focus on diabetes''' '''Introduction...")
     22:52  (Upload log)‎ . . [Biomath2024 1‎ (8×)]
      22:52 . . Biomath2024 1 (talk | contribs) uploaded File:Diabetes.png ‎
      22:51 . . Biomath2024 1 (talk | contribs) uploaded File:Linear regression.png ‎
      22:50 . . Biomath2024 1 (talk | contribs) uploaded File:Histograms.png ‎
      22:39 . . Biomath2024 1 (talk | contribs) uploaded File:Correlation matrix.png ‎
      22:38 . . Biomath2024 1 (talk | contribs) uploaded File:Sexdifferences slides.pdf ‎
      21:53 . . Biomath2024 1 (talk | contribs) uploaded File:Sex differences in retinal vascular properties & diabetes.pdf ‎
      11:24 . . Biomath2024 1 (talk | contribs) uploaded File:Capture d’écran 2024-05-31 à 11.23.50.png ‎
      09:13 . . Biomath2024 1 (talk | contribs) uploaded File:Summarylbj.png ‎
     22:24  UNIL BSc course: Solving Biological Problems that require Math 2024‎ (diff | hist) . . (+4)‎ . . Biomath2024 1 (talk | contribs)
N    16:14  User:Biomath2024 2‎‎ (4 changes | history) . . (+4,058)‎ . . [Biomath2024 2‎ (4×)]
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N     16:11 (cur | prev) . . (+4,027)‎ . . Biomath2024 2 (talk | contribs) (Created page with "'''Which unwanted factors influence laboratory mice?''' ''By Leticia Wüthrich and Martin Quintas. Supervisor: Frédéric Schütz.'' Link to presentation: https://docs.goog...")
     15:44  Top-bottom differences in retinal vascular properties‎‎ (5 changes | history) . . (+758)‎ . . [Biomath2024 1‎ (5×)]
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     09:00  Dates and Deadlines 2024‎ (diff | hist) . . (+1)‎ . . Sven (talk | contribs)

30 May 2024

N    22:23  Top-bottom differences in retinal vascular properties‎‎ (12 changes | history) . . (+11,641)‎ . . [Biomath2024 1‎ (12×)]
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      16:12 (cur | prev) . . (+1,330)‎ . . Biomath2024 1 (talk | contribs) (Our project focused on tortuosity differences between the top and bottom tortuosities of the retina, first by finding a separation method, then adapting the tortuosity calculation for our hemisphere, and finally finding out if there is a relevant asymetry)
N     16:04 (cur | prev) . . (+13)‎ . . Biomath2024 1 (talk | contribs) (Created page with "= Heading 1 =")
     22:21  (Upload log)‎ . . [Biomath2024 1‎ (2×)]
      22:21 . . Biomath2024 1 (talk | contribs) uploaded File:Tortle.pdf ‎
      22:08 . . Biomath2024 1 (talk | contribs) uploaded File:Slides lh bb jndf.pdf ‎
     21:08 (User rights log) . . WikiSysop (talk | contribs) changed group membership for Biomath2024 2 from (none) to student (temporary, until 21:08, 30 June 2024) ‎
     21:07 (User creation log) . . User account Biomath2024 2 (talk | contribs) was created by WikiSysop (talk | contribs) ‎
     16:00  UNIL BSc course: Solving Biological Problems that require Math 2024‎‎ (4 changes | history) . . (+11)‎ . . [Biomath2024 1‎ (4×)]
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N    15:14  Vascular properties of patients with peripheral artery disease‎ (diff | hist) . . (+7)‎ . . Biomath2024 1 (talk | contribs) (Created page with "Test123")

28 May 2024

     12:07 (User rights log) . . WikiSysop (talk | contribs) changed group membership for Biomath2024 1 from (none) to student (temporary, until 12:07, 28 June 2024) ‎
     12:06 (User creation log) . . User account Biomath2024 1 (talk | contribs) was created by WikiSysop (talk | contribs) ‎

14 May 2024

     11:52  UNIL BSc course: Bioinformatics Projects 2024‎ (diff | hist) . . (+1)‎ . . Sven (talk | contribs)
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