Under-expression is coded with green,
over-expression with red color.
extracellular region
The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
collagen
Any of the various assemblies in which collagen chains form a left-handed triple helix; may assemble into higher order structures.
cellular_component
The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together.
proteinaceous extracellular matrix
A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity.
fibrillar collagen
Any collagen polymer in which collagen triple helices associate to form fibrils.
extracellular matrix
A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants).
extracellular matrix part
Any constituent part of the extracellular matrix, the structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as often seen in plants).
extracellular region part
Any constituent part of the extracellular region, the space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers constituent parts of the host cell environment outside an intracellular parasite.
all
This term is the most general term possible
extracellular region part
Any constituent part of the extracellular region, the space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers constituent parts of the host cell environment outside an intracellular parasite.
extracellular matrix part
Any constituent part of the extracellular matrix, the structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as often seen in plants).
collagen
Any of the various assemblies in which collagen chains form a left-handed triple helix; may assemble into higher order structures.
CHN1chimerin (chimaerin) 1 (212624_s_at), score: 0.68 COL11A1collagen, type XI, alpha 1 (37892_at), score: 0.73 FAM65Bfamily with sequence similarity 65, member B (209829_at), score: 0.84 GLSglutaminase (203159_at), score: 0.67 GRAMD3GRAM domain containing 3 (218706_s_at), score: 0.81 KRTAP1-1keratin associated protein 1-1 (220976_s_at), score: 1 LUMlumican (201744_s_at), score: 0.72 OXTRoxytocin receptor (206825_at), score: 0.67 SDC3syndecan 3 (202898_at), score: 0.72 SERPINB7serpin peptidase inhibitor, clade B (ovalbumin), member 7 (206421_s_at), score: 0.81 STMN2stathmin-like 2 (203000_at), score: 0.78 TLE4transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila) (204872_at), score: 0.72 TNFRSF6Btumor necrosis factor receptor superfamily, member 6b, decoy (206467_x_at), score: 0.8 UCP2uncoupling protein 2 (mitochondrial, proton carrier) (208998_at), score: 0.86
Id | sample | Experiment | ExpName | Array | Syndrome | Cell.line |
---|---|---|---|---|---|---|
E-GEOD-3407-raw-cel-1437949579.cel | 2 | 4 | Cockayne | hgu133a | none | CSB |
E-GEOD-4219-raw-cel-1311956358.cel | 10 | 7 | Sph-mono | hgu133plus2 | none | Sph-mon 1 |
E-GEOD-4219-raw-cel-1311956178.cel | 6 | 7 | Sph-mono | hgu133plus2 | none | Sph-mon 1 |
E-GEOD-4219-raw-cel-1311956824.cel | 24 | 7 | Sph-mono | hgu133plus2 | none | Sph-mon 1 |
E-GEOD-3860-raw-cel-1561690376.cel | 13 | 5 | HGPS | hgu133a | HGPS | AG11513 |
E-GEOD-3860-raw-cel-1561690215.cel | 2 | 5 | HGPS | hgu133a | HGPS | AG11513 |
E-GEOD-3860-raw-cel-1561690248.cel | 5 | 5 | HGPS | hgu133a | HGPS | AG11513 |