Under-expression is coded with green,
over-expression with red color.
MAPKKK cascade
Cascade of at least three protein kinase activities culminating in the phosphorylation and activation of a MAP kinase. MAPKKK cascades lie downstream of numerous signaling pathways.
metabolic process
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
signal transduction
The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell.
protein modification process
The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification).
cell communication
Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment.
intracellular signaling cascade
A series of reactions within the cell that occur as a result of a single trigger reaction or compound.
protein kinase cascade
A series of reactions, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound.
biological_process
Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
cellular process
Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level.
protein metabolic process
The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification.
cellular biopolymer metabolic process
The chemical reactions and pathways involving biopolymers, long, repeating chains of monomers found in nature, such as polysaccharides and proteins, as carried out by individual cells.
macromolecule metabolic process
The chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass.
biopolymer metabolic process
The chemical reactions and pathways involving biopolymers, long, repeating chains of monomers found in nature, such as polysaccharides and proteins.
biopolymer modification
The covalent alteration of one or more monomeric units in a polypeptide, polynucleotide, polysaccharide, or other biological polymer, resulting in a change in its properties.
post-translational protein modification
The covalent alteration of one or more amino acids occurring in a protein after the protein has been completely translated and released from the ribosome.
cellular metabolic process
The chemical reactions and pathways by which individual cells transform chemical substances.
primary metabolic process
The chemical reactions and pathways involving those compounds which are formed as a part of the normal anabolic and catabolic processes. These processes take place in most, if not all, cells of the organism.
cellular macromolecule metabolic process
The chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass, as carried out by individual cells.
cellular protein metabolic process
The chemical reactions and pathways involving a specific protein, rather than of proteins in general, occurring at the level of an individual cell. Includes protein modification.
regulation of biological process
Any process that modulates the frequency, rate or extent of a biological process. Biological processes are regulated by many means; examples include the control of gene expression, protein modification or interaction with a protein or substrate molecule.
regulation of cellular process
Any process that modulates the frequency, rate or extent of a cellular process, any of those that are carried out at the cellular level, but are not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level.
biological regulation
Any process that modulates the frequency, rate or extent of any biological process, quality or function.
all
This term is the most general term possible
cellular metabolic process
The chemical reactions and pathways by which individual cells transform chemical substances.
regulation of cellular process
Any process that modulates the frequency, rate or extent of a cellular process, any of those that are carried out at the cellular level, but are not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level.
regulation of biological process
Any process that modulates the frequency, rate or extent of a biological process. Biological processes are regulated by many means; examples include the control of gene expression, protein modification or interaction with a protein or substrate molecule.
cellular macromolecule metabolic process
The chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass, as carried out by individual cells.
signal transduction
The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell.
protein metabolic process
The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification.
cellular biopolymer metabolic process
The chemical reactions and pathways involving biopolymers, long, repeating chains of monomers found in nature, such as polysaccharides and proteins, as carried out by individual cells.
cellular protein metabolic process
The chemical reactions and pathways involving a specific protein, rather than of proteins in general, occurring at the level of an individual cell. Includes protein modification.
protein modification process
The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification).
intracellular
The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
cellular_component
The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together.
cell
The basic structural and functional unit of all organisms. Includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope.
cytoplasm
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
cell surface
The external part of the cell wall and/or plasma membrane.
endomembrane system
A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles.
cytoplasmic membrane-bounded vesicle
A membrane-bounded vesicle found in the cytoplasm of the cell.
cytoplasmic vesicle
A vesicle formed of membrane or protein, found in the cytoplasm of a cell.
vesicle
Any small, fluid-filled, spherical organelle enclosed by membrane or protein.
membrane-bounded vesicle
Any small, fluid-filled, spherical organelle enclosed by a lipid bilayer.
melanosome
A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells.
organelle
Organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane.
membrane-bounded organelle
Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane.
intracellular organelle
Organized structure of distinctive morphology and function, occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane.
intracellular membrane-bounded organelle
Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane.
intracellular part
Any constituent part of the living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
cytoplasmic part
Any constituent part of the cytoplasm, all of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
cell part
Any constituent part of a cell, the basic structural and functional unit of all organisms.
pigment granule
A small, subcellular membrane-bounded vesicle containing pigment and/or pigment precursor molecules. Pigment granule biogenesis is poorly understood, as pigment granules are derived from multiple sources including the endoplasmic reticulum, coated vesicles, lysosomes, and endosomes.
all
This term is the most general term possible
cell part
Any constituent part of a cell, the basic structural and functional unit of all organisms.
cytoplasmic vesicle
A vesicle formed of membrane or protein, found in the cytoplasm of a cell.
intracellular membrane-bounded organelle
Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane.
intracellular part
Any constituent part of the living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
intracellular organelle
Organized structure of distinctive morphology and function, occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane.
cytoplasmic membrane-bounded vesicle
A membrane-bounded vesicle found in the cytoplasm of the cell.
cytoplasmic membrane-bounded vesicle
A membrane-bounded vesicle found in the cytoplasm of the cell.
cytoplasmic part
Any constituent part of the cytoplasm, all of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
cytoplasmic vesicle
A vesicle formed of membrane or protein, found in the cytoplasm of a cell.
| Id | Pvalue | ExpCount | Count | Size |
|---|---|---|---|---|
| miR-320/320abcd | 1.474e-02 | 19.38 | 41 | 372 |
ABCB1ATP-binding cassette, sub-family B (MDR/TAP), member 1 (209993_at), score: 0.49 ABCF2ATP-binding cassette, sub-family F (GCN20), member 2 (207622_s_at), score: 0.55 ABHD6abhydrolase domain containing 6 (221679_s_at), score: 0.49 ACLYATP citrate lyase (210337_s_at), score: 0.72 ACTBactin, beta (AFFX-HSAC07/X00351_5_at), score: 0.51 ACTR2ARP2 actin-related protein 2 homolog (yeast) (200727_s_at), score: 0.57 ADAM10ADAM metallopeptidase domain 10 (214895_s_at), score: 0.68 ADAM15ADAM metallopeptidase domain 15 (217007_s_at), score: 0.52 ADO2-aminoethanethiol (cysteamine) dioxygenase (212500_at), score: -0.55 ADRBK1adrenergic, beta, receptor kinase 1 (201401_s_at), score: 0.59 AFF4AF4/FMR2 family, member 4 (219199_at), score: 0.58 AGFG1ArfGAP with FG repeats 1 (213926_s_at), score: 0.56 AGPSalkylglycerone phosphate synthase (205401_at), score: 0.49 AKAP10A kinase (PRKA) anchor protein 10 (205045_at), score: 0.54 AKIRIN1akirin 1 (217893_s_at), score: 0.47 ANKFY1ankyrin repeat and FYVE domain containing 1 (219868_s_at), score: 0.66 ANKRD28ankyrin repeat domain 28 (213035_at), score: -0.58 AP1S1adaptor-related protein complex 1, sigma 1 subunit (205195_at), score: 0.48 ARF1ADP-ribosylation factor 1 (208750_s_at), score: 0.8 ARF4ADP-ribosylation factor 4 (201096_s_at), score: 0.48 ARFGEF1ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited) (216266_s_at), score: 0.65 ARHGDIARho GDP dissociation inhibitor (GDI) alpha (213606_s_at), score: 0.62 ASAP1ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 (221039_s_at), score: 0.6 ASNA1arsA arsenite transporter, ATP-binding, homolog 1 (bacterial) (202024_at), score: 0.46 ASPHaspartate beta-hydroxylase (205808_at), score: 0.61 ASTE1asteroid homolog 1 (Drosophila) (221135_s_at), score: -0.54 ATP13A3ATPase type 13A3 (219558_at), score: 0.65 ATP6AP2ATPase, H+ transporting, lysosomal accessory protein 2 (201444_s_at), score: 0.47 ATP6V1AATPase, H+ transporting, lysosomal 70kDa, V1 subunit A (201971_s_at), score: 0.84 BAG5BCL2-associated athanogene 5 (202984_s_at), score: 0.56 BCAT1branched chain aminotransferase 1, cytosolic (214452_at), score: 0.49 BCL2L1BCL2-like 1 (215037_s_at), score: 0.58 BCLAF1BCL2-associated transcription factor 1 (201101_s_at), score: 0.6 BET1Lblocked early in transport 1 homolog (S. cerevisiae)-like (220470_at), score: 0.54 BMPR2bone morphogenetic protein receptor, type II (serine/threonine kinase) (210214_s_at), score: 0.5 BSGbasigin (Ok blood group) (208677_s_at), score: 0.61 C10orf28chromosome 10 open reading frame 28 (210455_at), score: 0.56 C11orf2chromosome 11 open reading frame2 (217969_at), score: -0.53 C14orf1chromosome 14 open reading frame 1 (217188_s_at), score: 0.51 C14orf118chromosome 14 open reading frame 118 (219720_s_at), score: 0.59 C18orf10chromosome 18 open reading frame 10 (213617_s_at), score: 0.53 C19orf6chromosome 19 open reading frame 6 (213986_s_at), score: 0.86 C1orf144chromosome 1 open reading frame 144 (212003_at), score: 0.48 C20orf30chromosome 20 open reading frame 30 (220477_s_at), score: 0.5 CACNA2D1calcium channel, voltage-dependent, alpha 2/delta subunit 1 (207050_at), score: 0.7 CALM3calmodulin 3 (phosphorylase kinase, delta) (200622_x_at), score: 0.49 CALUcalumenin (214845_s_at), score: 0.89 CANXcalnexin (208853_s_at), score: 0.87 CAPRIN1cell cycle associated protein 1 (200722_s_at), score: 0.74 CBFBcore-binding factor, beta subunit (206788_s_at), score: 0.64 CCDC46coiled-coil domain containing 46 (213644_at), score: -0.52 CD44CD44 molecule (Indian blood group) (210916_s_at), score: 0.8 CD46CD46 molecule, complement regulatory protein (211574_s_at), score: 0.64 CDC27cell division cycle 27 homolog (S. cerevisiae) (217881_s_at), score: 0.51 CDK6cyclin-dependent kinase 6 (207143_at), score: 0.53 CDV3CDV3 homolog (mouse) (213548_s_at), score: 0.84 CHMchoroideremia (Rab escort protein 1) (207099_s_at), score: 0.63 CLIC4chloride intracellular channel 4 (201559_s_at), score: 0.71 CLINT1clathrin interactor 1 (201768_s_at), score: 0.66 CLIP1CAP-GLY domain containing linker protein 1 (210716_s_at), score: 0.6 CLPTM1cleft lip and palate associated transmembrane protein 1 (211136_s_at), score: 0.5 COL1A1collagen, type I, alpha 1 (217430_x_at), score: 0.63 COL6A1collagen, type VI, alpha 1 (212940_at), score: 0.86 COPAcoatomer protein complex, subunit alpha (214336_s_at), score: 0.92 COPS7ACOP9 constitutive photomorphogenic homolog subunit 7A (Arabidopsis) (209029_at), score: 0.54 CPDcarboxypeptidase D (201942_s_at), score: 0.89 CPNE3copine III (202118_s_at), score: 0.52 CRKv-crk sarcoma virus CT10 oncogene homolog (avian) (202226_s_at), score: 0.56 CSNK1A1casein kinase 1, alpha 1 (206562_s_at), score: 0.67 CTTNcortactin (201059_at), score: -0.56 CUL4Bcullin 4B (202213_s_at), score: 0.51 CYP51A1cytochrome P450, family 51, subfamily A, polypeptide 1 (216607_s_at), score: 0.7 CYTH3cytohesin 3 (206523_at), score: 0.55 DAPK3death-associated protein kinase 3 (203890_s_at), score: 0.73 DAZAP2DAZ associated protein 2 (212595_s_at), score: 0.75 DCBLD2discoidin, CUB and LCCL domain containing 2 (213865_at), score: 0.56 DCP2DCP2 decapping enzyme homolog (S. cerevisiae) (212919_at), score: -0.53 DCTN4dynactin 4 (p62) (218013_x_at), score: 0.56 DDX17DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 (208151_x_at), score: 0.52 DDX3XDEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked (201211_s_at), score: 1 DEGS1degenerative spermatocyte homolog 1, lipid desaturase (Drosophila) (207431_s_at), score: 0.56 DHX9DEAH (Asp-Glu-Ala-His) box polypeptide 9 (212105_s_at), score: 0.91 DIMT1LDIM1 dimethyladenosine transferase 1-like (S. cerevisiae) (210802_s_at), score: 0.48 DNAJB1DnaJ (Hsp40) homolog, subfamily B, member 1 (200664_s_at), score: 0.61 DNAJC3DnaJ (Hsp40) homolog, subfamily C, member 3 (208499_s_at), score: 0.45 DND1dead end homolog 1 (zebrafish) (57739_at), score: 0.53 DSTdystonin (212253_x_at), score: 0.71 DTX3deltex homolog 3 (Drosophila) (49049_at), score: 0.62 DUSP10dual specificity phosphatase 10 (215501_s_at), score: 0.62 EDEM3ER degradation enhancer, mannosidase alpha-like 3 (220342_x_at), score: 0.51 EDIL3EGF-like repeats and discoidin I-like domains 3 (207379_at), score: 0.47 EHMT1euchromatic histone-lysine N-methyltransferase 1 (219339_s_at), score: 0.49 EIF5Aeukaryotic translation initiation factor 5A (201123_s_at), score: 0.56 ELK1ELK1, member of ETS oncogene family (210376_x_at), score: 0.61 EML4echinoderm microtubule associated protein like 4 (220386_s_at), score: 0.46 ENO1enolase 1, (alpha) (217294_s_at), score: 0.5 ENPEPglutamyl aminopeptidase (aminopeptidase A) (204844_at), score: -0.55 ENSAendosulfine alpha (221487_s_at), score: 0.57 EPB41L2erythrocyte membrane protein band 4.1-like 2 (201718_s_at), score: 0.72 EPRSglutamyl-prolyl-tRNA synthetase (200841_s_at), score: 0.64 ERLIN1ER lipid raft associated 1 (202444_s_at), score: 0.78 ETS1v-ets erythroblastosis virus E26 oncogene homolog 1 (avian) (214447_at), score: 0.52 EXOC5exocyst complex component 5 (218748_s_at), score: 0.77 EXTL3exostoses (multiple)-like 3 (211051_s_at), score: 0.48 EZRezrin (208621_s_at), score: 0.51 FAM108B1family with sequence similarity 108, member B1 (220285_at), score: 0.58 FAM115Afamily with sequence similarity 115, member A (210529_s_at), score: 0.58 FBN1fibrillin 1 (202765_s_at), score: 0.57 FGFR1fibroblast growth factor receptor 1 (210973_s_at), score: 0.61 FHfumarate hydratase (203032_s_at), score: 0.47 FKBP15FK506 binding protein 15, 133kDa (76897_s_at), score: 0.6 FKBP1AFK506 binding protein 1A, 12kDa (210186_s_at), score: 0.74 FN1fibronectin 1 (214701_s_at), score: 0.78 FNTBfarnesyltransferase, CAAX box, beta (204764_at), score: 0.56 FRS2fibroblast growth factor receptor substrate 2 (221308_at), score: 0.61 FTH1ferritin, heavy polypeptide 1 (214211_at), score: -0.53 FUSfusion (involved in t(12;16) in malignant liposarcoma) (217370_x_at), score: 0.63 FXR1fragile X mental retardation, autosomal homolog 1 (201635_s_at), score: 0.62 GABPAGA binding protein transcription factor, alpha subunit 60kDa (210188_at), score: 0.51 GALNSgalactosamine (N-acetyl)-6-sulfate sulfatase (206335_at), score: -0.54 GALNT2UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2) (217787_s_at), score: 0.56 GDE1glycerophosphodiester phosphodiesterase 1 (202593_s_at), score: 0.68 GDI2GDP dissociation inhibitor 2 (200008_s_at), score: 0.72 GLE1GLE1 RNA export mediator homolog (yeast) (206920_s_at), score: 0.53 GLUD1glutamate dehydrogenase 1 (200946_x_at), score: 0.51 GLUD2glutamate dehydrogenase 2 (215794_x_at), score: 0.59 GLULglutamate-ammonia ligase (glutamine synthetase) (200648_s_at), score: 0.65 GNA12guanine nucleotide binding protein (G protein) alpha 12 (221737_at), score: -0.6 GNA13guanine nucleotide binding protein (G protein), alpha 13 (206917_at), score: 0.79 GNAI3guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 (201179_s_at), score: 0.48 GNSglucosamine (N-acetyl)-6-sulfatase (203676_at), score: 0.81 GPR137G protein-coupled receptor 137 (43934_at), score: 0.8 GPR176G protein-coupled receptor 176 (206673_at), score: 0.52 GSTM4glutathione S-transferase mu 4 (204149_s_at), score: 0.56 GTF2Igeneral transcription factor II, i (210892_s_at), score: 0.87 H2AFYH2A histone family, member Y (214500_at), score: 0.66 HADHAhydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), alpha subunit (208629_s_at), score: 0.48 HERC4hect domain and RLD 4 (208055_s_at), score: 0.48 HIG2hypoxia-inducible protein 2 (218507_at), score: -0.66 HIPK1homeodomain interacting protein kinase 1 (212291_at), score: 0.47 HIPK3homeodomain interacting protein kinase 3 (210148_at), score: 0.62 HMGA1high mobility group AT-hook 1 (210457_x_at), score: 0.58 HNRNPCheterogeneous nuclear ribonucleoprotein C (C1/C2) (200751_s_at), score: 0.61 HNRNPH1heterogeneous nuclear ribonucleoprotein H1 (H) (213470_s_at), score: 0.63 HP1BP3heterochromatin protein 1, binding protein 3 (220633_s_at), score: 0.75 HSP90AB1heat shock protein 90kDa alpha (cytosolic), class B member 1 (214359_s_at), score: 0.49 HSPA4heat shock 70kDa protein 4 (211016_x_at), score: 0.71 HSPA8heat shock 70kDa protein 8 (210338_s_at), score: 0.53 IFNGR1interferon gamma receptor 1 (211676_s_at), score: 0.46 IL13RA1interleukin 13 receptor, alpha 1 (210904_s_at), score: 0.53 IPO8importin 8 (205701_at), score: 0.71 ITGA4integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor) (205885_s_at), score: 0.54 JMJD4jumonji domain containing 4 (218560_s_at), score: -0.59 KCTD20potassium channel tetramerisation domain containing 20 (214849_at), score: 0.58 KDELR1KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1 (200922_at), score: 0.46 KIFC3kinesin family member C3 (209661_at), score: -0.51 KITLGKIT ligand (211124_s_at), score: 0.64 KLHL20kelch-like 20 (Drosophila) (210635_s_at), score: 0.55 KPNA4karyopherin alpha 4 (importin alpha 3) (209653_at), score: 0.72 LAMP1lysosomal-associated membrane protein 1 (201551_s_at), score: 0.72 LIG4ligase IV, DNA, ATP-dependent (206235_at), score: 0.52 LMAN1lectin, mannose-binding, 1 (203294_s_at), score: 0.81 LOC100128809similar to hCG2045829 (215707_s_at), score: 0.48 LOC100129652hypothetical protein LOC100129652 (208622_s_at), score: 0.47 LOC100133166similar to neighbor of BRCA1 gene 1 (201383_s_at), score: 0.52 LOC100133724similar to Voltage-dependent anion-selective channel protein 1 (VDAC-1) (hVDAC1) (Outer mitochondrial membrane protein porin 1) (Plasmalemmal porin) (Porin 31HL) (Porin 31HM) (217140_s_at), score: 0.57 LOC285412similar to KIAA0737 protein (217448_s_at), score: 0.67 LOC727977hypothetical LOC727977 (205787_x_at), score: 0.49 LOC729148nuclear undecaprenyl pyrophosphate synthase 1 pseudogene (215207_x_at), score: 0.65 LOC730092RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene (216908_x_at), score: 0.7 LOXlysyl oxidase (213640_s_at), score: 0.47 LOXL2lysyl oxidase-like 2 (202997_s_at), score: 0.51 LRRC2leucine rich repeat containing 2 (219949_at), score: -0.54 LRRC47leucine rich repeat containing 47 (212904_at), score: -0.55 LRRN2leucine rich repeat neuronal 2 (216164_at), score: 0.45 LSM4LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae) (202736_s_at), score: 0.51 LSSlanosterol synthase (2,3-oxidosqualene-lanosterol cyclase) (211019_s_at), score: 0.58 M6PRmannose-6-phosphate receptor (cation dependent) (200900_s_at), score: 0.58 MADDMAP-kinase activating death domain (38398_at), score: -0.62 MAP3K2mitogen-activated protein kinase kinase kinase 2 (221695_s_at), score: 0.78 MAP3K7mitogen-activated protein kinase kinase kinase 7 (211537_x_at), score: 0.8 MAP3K7IP2mitogen-activated protein kinase kinase kinase 7 interacting protein 2 (210284_s_at), score: 0.79 MAP4K5mitogen-activated protein kinase kinase kinase kinase 5 (203553_s_at), score: 0.65 MAPK1mitogen-activated protein kinase 1 (208351_s_at), score: 0.75 MAPKAPK2mitogen-activated protein kinase-activated protein kinase 2 (201461_s_at), score: 0.72 MAPRE1microtubule-associated protein, RP/EB family, member 1 (200712_s_at), score: 0.49 MARCH7membrane-associated ring finger (C3HC4) 7 (202654_x_at), score: 0.6 MAT2Amethionine adenosyltransferase II, alpha (200769_s_at), score: 0.87 MAXMYC associated factor X (210734_x_at), score: 0.83 MAZMYC-associated zinc finger protein (purine-binding transcription factor) (207824_s_at), score: 0.64 MBNL1muscleblind-like (Drosophila) (201151_s_at), score: 0.57 MBNL2muscleblind-like 2 (Drosophila) (205018_s_at), score: 0.8 MBTPS2membrane-bound transcription factor peptidase, site 2 (206473_at), score: 0.64 MED6mediator complex subunit 6 (207079_s_at), score: 0.58 METmet proto-oncogene (hepatocyte growth factor receptor) (211599_x_at), score: 0.6 MFN2mitofusin 2 (216205_s_at), score: 0.69 MLXMAX-like protein X (217909_s_at), score: 0.48 MMP14matrix metallopeptidase 14 (membrane-inserted) (202827_s_at), score: 0.47 MOBKL1BMOB1, Mps One Binder kinase activator-like 1B (yeast) (201299_s_at), score: 0.56 MPDU1mannose-P-dolichol utilization defect 1 (209208_at), score: 0.62 MPZL1myelin protein zero-like 1 (210087_s_at), score: 0.49 MTMR2myotubularin related protein 2 (214649_s_at), score: 0.49 NAB1NGFI-A binding protein 1 (EGR1 binding protein 1) (208047_s_at), score: 0.57 NBPF14neuroblastoma breakpoint family, member 14 (201104_x_at), score: 0.64 NCOA2nuclear receptor coactivator 2 (205732_s_at), score: 0.55 NCRNA00084non-protein coding RNA 84 (214657_s_at), score: 0.53 NDRG3NDRG family member 3 (221082_s_at), score: 0.54 NENFneuron derived neurotrophic factor (218407_x_at), score: -0.55 NF1neurofibromin 1 (211094_s_at), score: 0.58 NID1nidogen 1 (202008_s_at), score: 0.58 NNTnicotinamide nucleotide transhydrogenase (202784_s_at), score: 0.54 NONOnon-POU domain containing, octamer-binding (208698_s_at), score: 0.73 NOTCH2Notch homolog 2 (Drosophila) (210756_s_at), score: 0.76 NRASneuroblastoma RAS viral (v-ras) oncogene homolog (202647_s_at), score: 0.46 NRBP1nuclear receptor binding protein 1 (217765_at), score: 0.57 NUMA1nuclear mitotic apparatus protein 1 (214251_s_at), score: 0.64 NUP50nucleoporin 50kDa (218295_s_at), score: 0.49 OASL2'-5'-oligoadenylate synthetase-like (210797_s_at), score: 0.53 OGDHoxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) (201282_at), score: 0.48 OSMRoncostatin M receptor (205729_at), score: 0.66 PAFAH1B1platelet-activating factor acetylhydrolase, isoform Ib, alpha subunit 45kDa (211547_s_at), score: 0.79 PAOXpolyamine oxidase (exo-N4-amino) (50400_at), score: -0.53 PAPOLApoly(A) polymerase alpha (212720_at), score: 0.5 PBLDphenazine biosynthesis-like protein domain containing (219543_at), score: -0.55 PCDHGA11protocadherin gamma subfamily A, 11 (211876_x_at), score: 0.87 PCDHGA3protocadherin gamma subfamily A, 3 (216352_x_at), score: 0.91 PCIF1PDX1 C-terminal inhibiting factor 1 (222045_s_at), score: 0.51 PCYOX1prenylcysteine oxidase 1 (203803_at), score: 0.5 PDAP1PDGFA associated protein 1 (202290_at), score: 0.55 PEA15phosphoprotein enriched in astrocytes 15 (200787_s_at), score: 0.54 PGRMC1progesterone receptor membrane component 1 (201120_s_at), score: 0.56 PHF17PHD finger protein 17 (218517_at), score: -0.52 PHTF2putative homeodomain transcription factor 2 (217097_s_at), score: 0.83 PICALMphosphatidylinositol binding clathrin assembly protein (215236_s_at), score: 0.82 PIP5K1Aphosphatidylinositol-4-phosphate 5-kinase, type I, alpha (211205_x_at), score: 0.75 POLDIP3polymerase (DNA-directed), delta interacting protein 3 (215357_s_at), score: 0.73 POLR2Epolymerase (RNA) II (DNA directed) polypeptide E, 25kDa (213887_s_at), score: 0.56 POM121POM121 membrane glycoprotein (rat) (212178_s_at), score: 0.54 PPP2R1Aprotein phosphatase 2 (formerly 2A), regulatory subunit A, alpha isoform (200695_at), score: 0.53 PPP2R5Dprotein phosphatase 2, regulatory subunit B', delta isoform (211159_s_at), score: 0.53 PPP5Cprotein phosphatase 5, catalytic subunit (201979_s_at), score: 0.48 PQLC1PQ loop repeat containing 1 (218208_at), score: -0.54 PRKAA1protein kinase, AMP-activated, alpha 1 catalytic subunit (209799_at), score: 0.53 PRKAB1protein kinase, AMP-activated, beta 1 non-catalytic subunit (201835_s_at), score: 0.66 PRKAR1Aprotein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) (200604_s_at), score: 0.72 PRKD3protein kinase D3 (211084_x_at), score: 0.61 PRKDCprotein kinase, DNA-activated, catalytic polypeptide (210543_s_at), score: 0.48 PRPF4PRP4 pre-mRNA processing factor 4 homolog (yeast) (209162_s_at), score: 0.64 PRPF40APRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) (214941_s_at), score: 0.54 PRPF4BPRP4 pre-mRNA processing factor 4 homolog B (yeast) (211090_s_at), score: 0.72 PRPF6PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae) (208879_x_at), score: 0.53 PRRX1paired related homeobox 1 (205991_s_at), score: 0.78 PSEN1presenilin 1 (207782_s_at), score: 0.74 PSMB4proteasome (prosome, macropain) subunit, beta type, 4 (202243_s_at), score: -0.53 PSME4proteasome (prosome, macropain) activator subunit 4 (212220_at), score: 0.48 PTBP1polypyrimidine tract binding protein 1 (212016_s_at), score: 0.95 PTP4A1protein tyrosine phosphatase type IVA, member 1 (200730_s_at), score: 0.5 PTPN11protein tyrosine phosphatase, non-receptor type 11 (209896_s_at), score: 0.63 PTPN14protein tyrosine phosphatase, non-receptor type 14 (205503_at), score: 0.65 PTPRAprotein tyrosine phosphatase, receptor type, A (213799_s_at), score: 0.48 PTPROprotein tyrosine phosphatase, receptor type, O (211600_at), score: 0.7 PXNpaxillin (211823_s_at), score: 0.73 RAB35RAB35, member RAS oncogene family (205461_at), score: 0.67 RAB5ARAB5A, member RAS oncogene family (206113_s_at), score: 0.93 RAB5CRAB5C, member RAS oncogene family (201156_s_at), score: 0.82 RALBv-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein) (202101_s_at), score: 0.48 RANBP2RAN binding protein 2 (201711_x_at), score: 0.59 RANBP9RAN binding protein 9 (202583_s_at), score: 0.47 RASA3RAS p21 protein activator 3 (206220_s_at), score: 0.53 RBM9RNA binding motif protein 9 (213901_x_at), score: 0.62 RCAN1regulator of calcineurin 1 (215253_s_at), score: 0.47 RCOR3REST corepressor 3 (218344_s_at), score: 0.49 RDXradixin (204969_s_at), score: 0.62 RELAv-rel reticuloendotheliosis viral oncogene homolog A (avian) (209878_s_at), score: 0.52 RHOAras homolog gene family, member A (200059_s_at), score: 0.58 RIOK3RIO kinase 3 (yeast) (202129_s_at), score: 0.53 RNASEH2Bribonuclease H2, subunit B (219056_at), score: -0.65 RNF19Aring finger protein 19A (220483_s_at), score: 0.53 RNFT1ring finger protein, transmembrane 1 (221194_s_at), score: 0.52 RNGTTRNA guanylyltransferase and 5'-phosphatase (204207_s_at), score: 0.48 RPL31ribosomal protein L31 (221593_s_at), score: -0.52 RPS10P3ribosomal protein S10 pseudogene 3 (217336_at), score: -0.51 RRN3RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae) (216902_s_at), score: 0.68 RRP7Bribosomal RNA processing 7 homolog B (S. cerevisiae) (214828_s_at), score: 0.68 RXRBretinoid X receptor, beta (215099_s_at), score: 0.75 RYKRYK receptor-like tyrosine kinase (216976_s_at), score: 0.51 SCAMP1secretory carrier membrane protein 1 (206667_s_at), score: 0.74 SCARB2scavenger receptor class B, member 2 (201647_s_at), score: 0.69 SCYL2SCY1-like 2 (S. cerevisiae) (221220_s_at), score: 0.55 SDHCsuccinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa (216591_s_at), score: 0.69 SEC23ASec23 homolog A (S. cerevisiae) (204344_s_at), score: 0.59 SEC23IPSEC23 interacting protein (216392_s_at), score: 0.49 SEL1Lsel-1 suppressor of lin-12-like (C. elegans) (202062_s_at), score: 0.48 SELTselenoprotein T (217811_at), score: 0.48 SENP3SUMO1/sentrin/SMT3 specific peptidase 3 (215113_s_at), score: 0.7 SEPT10septin 10 (214720_x_at), score: 0.49 SEPT11septin 11 (201308_s_at), score: 0.73 SEPT2septin 2 (200778_s_at), score: 0.65 SFNstratifin (33322_i_at), score: -0.53 SFRS1splicing factor, arginine/serine-rich 1 (201742_x_at), score: 0.75 SGPP1sphingosine-1-phosphate phosphatase 1 (221268_s_at), score: 0.52 SH3GLB2SH3-domain GRB2-like endophilin B2 (218813_s_at), score: 0.46 SHC1SHC (Src homology 2 domain containing) transforming protein 1 (201469_s_at), score: 0.58 SIGMAR1sigma non-opioid intracellular receptor 1 (214484_s_at), score: 0.51 SKAP2src kinase associated phosphoprotein 2 (216899_s_at), score: 0.64 SLC12A4solute carrier family 12 (potassium/chloride transporters), member 4 (209401_s_at), score: 0.64 SLC22A4solute carrier family 22 (organic cation/ergothioneine transporter), member 4 (205896_at), score: -0.55 SLC6A9solute carrier family 6 (neurotransmitter transporter, glycine), member 9 (207043_s_at), score: 0.53 SMARCA2SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 (212257_s_at), score: 0.46 SMEK1SMEK homolog 1, suppressor of mek1 (Dictyostelium) (220368_s_at), score: 0.91 SNAP23synaptosomal-associated protein, 23kDa (214544_s_at), score: 0.76 SNURFSNRPN upstream reading frame (206042_x_at), score: 0.46 SP1Sp1 transcription factor (214732_at), score: 0.46 SPAG9sperm associated antigen 9 (206748_s_at), score: 0.74 SPPL2Bsignal peptide peptidase-like 2B (215833_s_at), score: 0.51 SPSB3splA/ryanodine receptor domain and SOCS box containing 3 (46256_at), score: -0.55 SPTLC1serine palmitoyltransferase, long chain base subunit 1 (202278_s_at), score: 0.57 SQLEsqualene epoxidase (213562_s_at), score: 0.49 SRPRsignal recognition particle receptor (docking protein) (200917_s_at), score: 0.72 SS18synovial sarcoma translocation, chromosome 18 (216684_s_at), score: 0.79 STAG3L4stromal antigen 3-like 4 (218994_s_at), score: -0.53 STAT1signal transducer and activator of transcription 1, 91kDa (AFFX-HUMISGF3A/M97935_MA_at), score: 0.54 STAT3signal transducer and activator of transcription 3 (acute-phase response factor) (208992_s_at), score: 0.52 STIP1stress-induced-phosphoprotein 1 (212009_s_at), score: 0.84 SYPL1synaptophysin-like 1 (201259_s_at), score: 0.9 TAF9BTAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa (221618_s_at), score: 0.72 TBL1XR1transducin (beta)-like 1 X-linked receptor 1 (221428_s_at), score: 0.52 TFCP2transcription factor CP2 (207627_s_at), score: 0.48 TGFBR2transforming growth factor, beta receptor II (70/80kDa) (207334_s_at), score: 0.77 TJP1tight junction protein 1 (zona occludens 1) (214168_s_at), score: 0.66 TLN1talin 1 (203254_s_at), score: 0.48 TM9SF4transmembrane 9 superfamily protein member 4 (212194_s_at), score: 0.66 TMCO3transmembrane and coiled-coil domains 3 (220240_s_at), score: 0.63 TMED2transmembrane emp24 domain trafficking protein 2 (204426_at), score: 0.79 TMOD3tropomodulin 3 (ubiquitous) (220800_s_at), score: 0.64 TMX1thioredoxin-related transmembrane protein 1 (208097_s_at), score: 0.65 TOR1AIP1torsin A interacting protein 1 (216100_s_at), score: 0.66 TPM4tropomyosin 4 (212481_s_at), score: 0.57 TRAM1translocation associated membrane protein 1 (210733_at), score: 0.5 TRIM25tripartite motif-containing 25 (206911_at), score: 0.48 TSNtranslin (201504_s_at), score: 0.58 TSPAN3tetraspanin 3 (200973_s_at), score: 0.52 TUBB2Atubulin, beta 2A (209372_x_at), score: 0.6 TWF1twinfilin, actin-binding protein, homolog 1 (Drosophila) (214007_s_at), score: 0.55 UBA6ubiquitin-like modifier activating enzyme 6 (218340_s_at), score: 0.6 UBAP2Lubiquitin associated protein 2-like (201378_s_at), score: 0.55 UBE2Aubiquitin-conjugating enzyme E2A (RAD6 homolog) (201898_s_at), score: 0.49 UBE2D3ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast) (200669_s_at), score: 0.76 UBE2Hubiquitin-conjugating enzyme E2H (UBC8 homolog, yeast) (221962_s_at), score: 0.55 UBE2Mubiquitin-conjugating enzyme E2M (UBC12 homolog, yeast) (203109_at), score: 0.47 UBXN4UBX domain protein 4 (212008_at), score: 0.76 USP34ubiquitin specific peptidase 34 (212065_s_at), score: 0.57 UTRNutrophin (213022_s_at), score: 0.7 VAMP3vesicle-associated membrane protein 3 (cellubrevin) (201337_s_at), score: 0.79 VCANversican (215646_s_at), score: 0.58 WACWW domain containing adaptor with coiled-coil (219679_s_at), score: 0.82 WDR1WD repeat domain 1 (210935_s_at), score: 0.76 XPNPEP1X-prolyl aminopeptidase (aminopeptidase P) 1, soluble (208453_s_at), score: 0.59 XPO7exportin 7 (212166_at), score: 0.47 YIPF5Yip1 domain family, member 5 (221423_s_at), score: 0.7 YKT6YKT6 v-SNARE homolog (S. cerevisiae) (217785_s_at), score: 0.46 YWHAEtyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide (210317_s_at), score: 0.77 YWHAZtyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide (200641_s_at), score: 0.78 ZFAND5zinc finger, AN1-type domain 5 (217741_s_at), score: 0.74 ZMYND11zinc finger, MYND domain containing 11 (202137_s_at), score: 0.56 ZNF224zinc finger protein 224 (216983_s_at), score: 0.49 ZNF26zinc finger protein 26 (219595_at), score: -0.62 ZNF532zinc finger protein 532 (220617_s_at), score: 0.46
| Id | sample | Experiment | ExpName | Array | Syndrome | Cell.line |
|---|---|---|---|---|---|---|
| ctrl c 08-03.CEL | 3 | 1 | DS-CC | hgu133a | none | DS-CC 3 |
| E-TABM-263-raw-cel-1515486031.cel | 20 | 6 | Cycle | hgu133a2 | none | Cycle 1 |
| 4Twin.CEL | 4 | 2 | DS-twin | hgu133plus2 | none | DS-twin 4 |
| E-GEOD-3407-raw-cel-1437949655.cel | 3 | 4 | Cockayne | hgu133a | none | CSB |
| E-GEOD-3407-raw-cel-1437949938.cel | 8 | 4 | Cockayne | hgu133a | none | CSB |
| E-GEOD-3407-raw-cel-1437949854.cel | 7 | 4 | Cockayne | hgu133a | CS | eGFP |
