Under-expression is coded with green,
over-expression with red color.
membrane
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
integral to membrane
Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane.
cellular_component
The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together.
cell
The basic structural and functional unit of all organisms. Includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope.
intrinsic to membrane
Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane.
membrane part
Any constituent part of a membrane, a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
cell part
Any constituent part of a cell, the basic structural and functional unit of all organisms.
all
This term is the most general term possible
cell part
Any constituent part of a cell, the basic structural and functional unit of all organisms.
membrane part
Any constituent part of a membrane, a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
molecular_function
Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions.
signal transducer activity
Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell.
receptor activity
Combining with an extracellular or intracellular messenger to initiate a change in cell activity.
transmembrane receptor activity
Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle.
molecular transducer activity
The molecular function that accepts an input of one form and creates an output of a different form.
all
This term is the most general term possible
A1CFAPOBEC1 complementation factor (220951_s_at), score: 0.87 ABOABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase) (216716_at), score: 0.72 ADAMTS7ADAM metallopeptidase with thrombospondin type 1 motif, 7 (220705_s_at), score: 0.8 BMP10bone morphogenetic protein 10 (208292_at), score: 0.83 BRS3bombesin-like receptor 3 (207369_at), score: 0.72 BTNL3butyrophilin-like 3 (217207_s_at), score: 0.96 C1orf61chromosome 1 open reading frame 61 (205103_at), score: 0.79 C21orf2chromosome 21 open reading frame 2 (203996_s_at), score: 0.75 C7orf28Achromosome 7 open reading frame 28A (201974_s_at), score: 0.69 C8orf17chromosome 8 open reading frame 17 (208266_at), score: 0.67 C8orf60chromosome 8 open reading frame 60 (220712_at), score: 0.76 CASZ1castor zinc finger 1 (220015_at), score: 0.7 CD53CD53 molecule (203416_at), score: 0.78 CEACAM6carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) (211657_at), score: 0.69 CHN2chimerin (chimaerin) 2 (207486_x_at), score: 0.7 CLDN10claudin 10 (205328_at), score: 0.72 CLEC4MC-type lectin domain family 4, member M (207995_s_at), score: 0.67 COL11A2collagen, type XI, alpha 2 (216993_s_at), score: 0.8 CYP2C9cytochrome P450, family 2, subfamily C, polypeptide 9 (214421_x_at), score: 0.69 CYP3A4cytochrome P450, family 3, subfamily A, polypeptide 4 (205998_x_at), score: 0.81 DHRS9dehydrogenase/reductase (SDR family) member 9 (219799_s_at), score: 0.72 DNASE1L3deoxyribonuclease I-like 3 (205554_s_at), score: 0.68 DOHHdeoxyhypusine hydroxylase/monooxygenase (208141_s_at), score: 0.71 DRD5dopamine receptor D5 (208486_at), score: 0.82 EDAectodysplasin A (211130_x_at), score: 0.83 EDARectodysplasin A receptor (220048_at), score: 0.69 ETNK2ethanolamine kinase 2 (219268_at), score: 0.69 FAM38Bfamily with sequence similarity 38, member B (219602_s_at), score: 0.69 FBRSfibrosin (218255_s_at), score: 0.83 FGL1fibrinogen-like 1 (205305_at), score: 0.73 FKSG2apoptosis inhibitor (208588_at), score: 0.72 FMO4flavin containing monooxygenase 4 (206263_at), score: 0.69 FOSBFBJ murine osteosarcoma viral oncogene homolog B (202768_at), score: 0.66 FUT3fucosyltransferase 3 (galactoside 3(4)-L-fucosyltransferase, Lewis blood group) (214088_s_at), score: 0.72 GP1BAglycoprotein Ib (platelet), alpha polypeptide (207389_at), score: 0.78 GPATCH4G patch domain containing 4 (220596_at), score: 0.7 GRHL2grainyhead-like 2 (Drosophila) (219388_at), score: 0.7 HAO2hydroxyacid oxidase 2 (long chain) (220801_s_at), score: 0.7 HBBhemoglobin, beta (211696_x_at), score: 0.81 HECW1HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1 (215584_at), score: 0.69 HIST1H2ALhistone cluster 1, H2al (214554_at), score: 0.78 HIST1H4Dhistone cluster 1, H4d (208076_at), score: 0.68 HS3ST2heparan sulfate (glucosamine) 3-O-sulfotransferase 2 (219697_at), score: 0.67 IL16interleukin 16 (lymphocyte chemoattractant factor) (209827_s_at), score: 0.74 JMJD3jumonji domain containing 3, histone lysine demethylase (213146_at), score: 0.68 KCNJ16potassium inwardly-rectifying channel, subfamily J, member 16 (219564_at), score: 0.71 KCNMB4potassium large conductance calcium-activated channel, subfamily M, beta member 4 (219287_at), score: 0.66 KCNQ3potassium voltage-gated channel, KQT-like subfamily, member 3 (206573_at), score: 0.81 KIR3DX1killer cell immunoglobulin-like receptor, three domains, X1 (216428_x_at), score: 0.67 KLF1Kruppel-like factor 1 (erythroid) (210504_at), score: 0.77 LHX3LIM homeobox 3 (221670_s_at), score: 0.71 LOC100188945cell division cycle associated 4 pseudogene (215109_at), score: 0.74 LOC80054hypothetical LOC80054 (220465_at), score: 0.85 LOH3CR2Aloss of heterozygosity, 3, chromosomal region 2, gene A (220244_at), score: 0.76 LONRF3LON peptidase N-terminal domain and ring finger 3 (220009_at), score: 0.75 MAPK8IP2mitogen-activated protein kinase 8 interacting protein 2 (205050_s_at), score: 0.79 MMP9matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase) (203936_s_at), score: 0.72 MMRN2multimerin 2 (219091_s_at), score: 0.95 MOBPmyelin-associated oligodendrocyte basic protein (210193_at), score: 0.85 MYL4myosin, light chain 4, alkali; atrial, embryonic (210088_x_at), score: 0.8 MYO1Amyosin IA (211916_s_at), score: 0.99 NCAM2neural cell adhesion molecule 2 (205669_at), score: 0.68 NCRNA00092non-protein coding RNA 92 (215861_at), score: 0.67 NRN1neuritin 1 (218625_at), score: 0.71 NTRK2neurotrophic tyrosine kinase, receptor, type 2 (207152_at), score: 0.76 NTRK3neurotrophic tyrosine kinase, receptor, type 3 (217033_x_at), score: 0.76 OR1E2olfactory receptor, family 1, subfamily E, member 2 (208587_s_at), score: 0.79 OR7E24olfactory receptor, family 7, subfamily E, member 24 (215463_at), score: 0.81 OVOL2ovo-like 2 (Drosophila) (211778_s_at), score: 0.78 PECAM1platelet/endothelial cell adhesion molecule (208982_at), score: 0.81 PGCprogastricsin (pepsinogen C) (205261_at), score: 0.74 PGK2phosphoglycerate kinase 2 (217009_at), score: 0.82 PHF20L1PHD finger protein 20-like 1 (222133_s_at), score: 0.7 PIPOXpipecolic acid oxidase (221605_s_at), score: 0.67 PNPLA2patatin-like phospholipase domain containing 2 (212705_x_at), score: 0.74 PPP4R4protein phosphatase 4, regulatory subunit 4 (220672_at), score: 0.76 PRB3proline-rich protein BstNI subfamily 3 (206998_x_at), score: 0.7 PRSS7protease, serine, 7 (enterokinase) (217269_s_at), score: 0.94 PTPREprotein tyrosine phosphatase, receptor type, E (221840_at), score: 0.71 PYHIN1pyrin and HIN domain family, member 1 (216748_at), score: 0.87 RASL11BRAS-like, family 11, member B (219142_at), score: 0.68 RETret proto-oncogene (205879_x_at), score: 0.72 ROS1c-ros oncogene 1 , receptor tyrosine kinase (207569_at), score: 0.68 RP11-35N6.1plasticity related gene 3 (219732_at), score: 0.68 RP3-377H14.5hypothetical LOC285830 (222279_at), score: 0.8 RPGRIP1retinitis pigmentosa GTPase regulator interacting protein 1 (206608_s_at), score: 0.8 S100A14S100 calcium binding protein A14 (218677_at), score: 0.77 SCN10Asodium channel, voltage-gated, type X, alpha subunit (208578_at), score: 0.8 SERPINA1serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 (211429_s_at), score: 0.79 SERPINB3serpin peptidase inhibitor, clade B (ovalbumin), member 3 (209719_x_at), score: 0.66 SLC10A1solute carrier family 10 (sodium/bile acid cotransporter family), member 1 (207185_at), score: 0.8 SLC10A2solute carrier family 10 (sodium/bile acid cotransporter family), member 2 (207095_at), score: 0.71 SLC1A7solute carrier family 1 (glutamate transporter), member 7 (210923_at), score: 0.67 SLC26A10solute carrier family 26, member 10 (214951_at), score: 0.69 ST6GAL1ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 (201998_at), score: 0.8 ST8SIA3ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 (208064_s_at), score: 0.69 TAAR2trace amine associated receptor 2 (221394_at), score: 0.66 TACR1tachykinin receptor 1 (208048_at), score: 0.77 TBX21T-box 21 (220684_at), score: 0.89 TBX6T-box 6 (207684_at), score: 0.8 TMSB4Ythymosin beta 4, Y-linked (206769_at), score: 0.84 TNFSF9tumor necrosis factor (ligand) superfamily, member 9 (206907_at), score: 0.7 TSPY1testis specific protein, Y-linked 1 (216374_at), score: 0.69 VGFVGF nerve growth factor inducible (205586_x_at), score: 1
| Id | sample | Experiment | ExpName | Array | Syndrome | Cell.line |
|---|---|---|---|---|---|---|
| E-TABM-263-raw-cel-1515485651.cel | 1 | 6 | Cycle | hgu133a2 | none | Cycle 1 |
| E-TABM-263-raw-cel-1515486071.cel | 22 | 6 | Cycle | hgu133a2 | none | Cycle 1 |
| E-TABM-263-raw-cel-1515485951.cel | 16 | 6 | Cycle | hgu133a2 | none | Cycle 1 |
| t21d 08-03.CEL | 7 | 1 | DS-CC | hgu133a | Down | DS-CC 7 |
| t21a 08-03.CEL | 4 | 1 | DS-CC | hgu133a | Down | DS-CC 4 |
| ctrl a 08-03.CEL | 1 | 1 | DS-CC | hgu133a | none | DS-CC 1 |
