Under-expression is coded with green,
over-expression with red color.
system process
A multicellular organismal process carried out by any of the organs or tissues in an organ system. An organ system is a regularly interacting or interdependent group of organs or tissues that work together to carry out a biological objective.
signal transduction
The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell.
cell communication
Any process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment.
cell surface receptor linked signal transduction
Any series of molecular signals initiated by the binding of an extracellular ligand to a receptor on the surface of the target cell.
G-protein coupled receptor protein signaling pathway
The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand.
neurological system process
A organ system process carried out by any of the organs or tissues of neurological system.
sensory perception
The series of events required for an organism to receive a sensory stimulus, convert it to a molecular signal, and recognize and characterize the signal.
biological_process
Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
cellular process
Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level.
multicellular organismal process
Any biological process, occurring at the level of a multicellular organism, pertinent to its function.
regulation of biological process
Any process that modulates the frequency, rate or extent of a biological process. Biological processes are regulated by many means; examples include the control of gene expression, protein modification or interaction with a protein or substrate molecule.
regulation of cellular process
Any process that modulates the frequency, rate or extent of a cellular process, any of those that are carried out at the cellular level, but are not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level.
cognition
The operation of the mind by which an organism becomes aware of objects of thought or perception; it includes the mental activities associated with thinking, learning, and memory.
biological regulation
Any process that modulates the frequency, rate or extent of any biological process, quality or function.
all
This term is the most general term possible
regulation of cellular process
Any process that modulates the frequency, rate or extent of a cellular process, any of those that are carried out at the cellular level, but are not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level.
regulation of biological process
Any process that modulates the frequency, rate or extent of a biological process. Biological processes are regulated by many means; examples include the control of gene expression, protein modification or interaction with a protein or substrate molecule.
signal transduction
The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell.
plasma membrane
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
membrane
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
integral to membrane
Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane.
integral to plasma membrane
Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer.
cellular_component
The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together.
cell
The basic structural and functional unit of all organisms. Includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope.
intrinsic to membrane
Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane.
intrinsic to plasma membrane
Located in the plasma membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane.
membrane part
Any constituent part of a membrane, a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
plasma membrane part
Any constituent part of the plasma membrane, the membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
cell part
Any constituent part of a cell, the basic structural and functional unit of all organisms.
all
This term is the most general term possible
cell part
Any constituent part of a cell, the basic structural and functional unit of all organisms.
membrane part
Any constituent part of a membrane, a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
plasma membrane part
Any constituent part of the plasma membrane, the membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
intrinsic to plasma membrane
Located in the plasma membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane.
integral to plasma membrane
Penetrating at least one phospholipid bilayer of a plasma membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer.
molecular_function
Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions.
signal transducer activity
Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell.
receptor activity
Combining with an extracellular or intracellular messenger to initiate a change in cell activity.
transmembrane receptor activity
Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle.
G-protein coupled receptor activity
A receptor that binds an extracellular ligand and transmits the signal to a heterotrimeric G-protein complex. These receptors are characteristically seven-transmembrane receptors and are made up of hetero- or homodimers.
molecular transducer activity
The molecular function that accepts an input of one form and creates an output of a different form.
all
This term is the most general term possible
| Id | Pvalue | ExpCount | Count | Size | Term |
|---|---|---|---|---|---|
| 04740 | 1.489e-02 | 0.2971 | 4 | 27 | Olfactory transduction |
| 04080 | 1.749e-02 | 0.9134 | 6 | 83 | Neuroactive ligand-receptor interaction |
A1CFAPOBEC1 complementation factor (220951_s_at), score: 0.64 ACSL6acyl-CoA synthetase long-chain family member 6 (211207_s_at), score: 0.64 ADAMTS9ADAM metallopeptidase with thrombospondin type 1 motif, 9 (220287_at), score: 0.62 ADRBK2adrenergic, beta, receptor kinase 2 (204184_s_at), score: 0.8 AFF2AF4/FMR2 family, member 2 (206105_at), score: 0.72 AGBL2ATP/GTP binding protein-like 2 (220390_at), score: 0.68 ATRNL1attractin-like 1 (213744_at), score: 0.74 BMP10bone morphogenetic protein 10 (208292_at), score: 0.67 BRS3bombesin-like receptor 3 (207369_at), score: 0.61 BTNL3butyrophilin-like 3 (217207_s_at), score: 0.61 C1QL1complement component 1, q subcomponent-like 1 (205575_at), score: 0.61 C7orf28Achromosome 7 open reading frame 28A (201974_s_at), score: 0.69 CA1carbonic anhydrase I (205949_at), score: 0.83 CA4carbonic anhydrase IV (206209_s_at), score: 0.66 CARTPTCART prepropeptide (206339_at), score: 0.63 CD53CD53 molecule (203416_at), score: 0.82 CEACAM5carcinoembryonic antigen-related cell adhesion molecule 5 (201884_at), score: 0.68 CEACAM6carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) (211657_at), score: 0.68 CG012hypothetical gene CG012 (215318_at), score: 0.64 CHRNA9cholinergic receptor, nicotinic, alpha 9 (221107_at), score: 0.62 CLCA2chloride channel accessory 2 (217528_at), score: 0.74 CLDN10claudin 10 (205328_at), score: 0.83 CLEC2DC-type lectin domain family 2, member D (220132_s_at), score: 0.68 CLEC4MC-type lectin domain family 4, member M (207995_s_at), score: 0.65 CNKSR2connector enhancer of kinase suppressor of Ras 2 (206731_at), score: 0.84 CTRLchymotrypsin-like (214377_s_at), score: 0.79 CYBBcytochrome b-245, beta polypeptide (203923_s_at), score: 0.69 CYP2C9cytochrome P450, family 2, subfamily C, polypeptide 9 (214421_x_at), score: 0.62 CYP2E1cytochrome P450, family 2, subfamily E, polypeptide 1 (1431_at), score: 0.68 DAOD-amino-acid oxidase (206878_at), score: 0.73 DHRS9dehydrogenase/reductase (SDR family) member 9 (219799_s_at), score: 0.75 DNASE1L3deoxyribonuclease I-like 3 (205554_s_at), score: 0.65 DNM3dynamin 3 (209839_at), score: 0.65 DOHHdeoxyhypusine hydroxylase/monooxygenase (208141_s_at), score: 0.7 DRD5dopamine receptor D5 (208486_at), score: 0.65 DSC2desmocollin 2 (204751_x_at), score: 0.71 ENPP4ectonucleotide pyrophosphatase/phosphodiesterase 4 (putative function) (204160_s_at), score: 0.68 GPATCH4G patch domain containing 4 (220596_at), score: 0.74 GPR12G protein-coupled receptor 12 (214558_at), score: 0.66 GRHL2grainyhead-like 2 (Drosophila) (219388_at), score: 0.75 GRM6glutamate receptor, metabotropic 6 (208035_at), score: 0.63 HOXD4homeobox D4 (205522_at), score: 0.61 IFNGinterferon, gamma (210354_at), score: 0.62 IL16interleukin 16 (lymphocyte chemoattractant factor) (209827_s_at), score: 0.69 IL1RAPL1interleukin 1 receptor accessory protein-like 1 (220663_at), score: 0.71 KCNQ3potassium voltage-gated channel, KQT-like subfamily, member 3 (206573_at), score: 0.61 KERAkeratocan (220504_at), score: 0.67 KIR3DX1killer cell immunoglobulin-like receptor, three domains, X1 (216428_x_at), score: 0.65 KLHL4kelch-like 4 (Drosophila) (214591_at), score: 0.61 KNG1kininogen 1 (217512_at), score: 0.69 KRT2keratin 2 (207908_at), score: 0.82 L3MBTLl(3)mbt-like (Drosophila) (213837_at), score: 0.66 LHX3LIM homeobox 3 (221670_s_at), score: 0.73 LOC100188945cell division cycle associated 4 pseudogene (215109_at), score: 0.72 LOC643293FLJ44451 pseudogene (215057_at), score: 0.63 LOC730227hypothetical protein LOC730227 (215756_at), score: 0.63 LOC93432maltase-glucoamylase-like pseudogene (216666_at), score: 0.79 LONRF3LON peptidase N-terminal domain and ring finger 3 (220009_at), score: 0.68 LPAR4lysophosphatidic acid receptor 4 (206960_at), score: 0.65 MAPK8IP2mitogen-activated protein kinase 8 interacting protein 2 (205050_s_at), score: 0.64 MBmyoglobin (204179_at), score: 0.73 MIA2melanoma inhibitory activity 2 (221177_at), score: 0.68 MMRN2multimerin 2 (219091_s_at), score: 0.72 MOBPmyelin-associated oligodendrocyte basic protein (210193_at), score: 0.67 MSTP9macrophage stimulating, pseudogene 9 (213382_at), score: 0.76 MYBPC1myosin binding protein C, slow type (214087_s_at), score: 0.66 MYO1Amyosin IA (211916_s_at), score: 0.73 NINninein (GSK3B interacting protein) (219285_s_at), score: 0.61 NR0B1nuclear receptor subfamily 0, group B, member 1 (206644_at), score: 0.7 NRN1neuritin 1 (218625_at), score: 0.75 NTRK2neurotrophic tyrosine kinase, receptor, type 2 (207152_at), score: 0.76 NYXnyctalopin (221684_s_at), score: 0.63 OR1E2olfactory receptor, family 1, subfamily E, member 2 (208587_s_at), score: 0.62 OR2C1olfactory receptor, family 2, subfamily C, member 1 (221460_at), score: 0.63 OR7E24olfactory receptor, family 7, subfamily E, member 24 (215463_at), score: 0.66 PAX4paired box 4 (207867_at), score: 0.72 PCDHA9protocadherin alpha 9 (208205_at), score: 0.66 PECAM1platelet/endothelial cell adhesion molecule (208982_at), score: 0.75 PEG3paternally expressed 3 (209242_at), score: 0.7 PGCprogastricsin (pepsinogen C) (205261_at), score: 0.73 PGK2phosphoglycerate kinase 2 (217009_at), score: 0.79 PMP2peripheral myelin protein 2 (206826_at), score: 0.69 PNPLA2patatin-like phospholipase domain containing 2 (212705_x_at), score: 0.64 PON1paraoxonase 1 (206344_at), score: 0.68 POU4F2POU class 4 homeobox 2 (207725_at), score: 0.62 PPIAL4Apeptidylprolyl isomerase A (cyclophilin A)-like 4A (217136_at), score: 0.69 PPP4R4protein phosphatase 4, regulatory subunit 4 (220672_at), score: 0.7 PROL1proline rich, lacrimal 1 (208004_at), score: 0.68 PRSS7protease, serine, 7 (enterokinase) (217269_s_at), score: 0.65 PYHIN1pyrin and HIN domain family, member 1 (216748_at), score: 0.75 RAPGEF4Rap guanine nucleotide exchange factor (GEF) 4 (205651_x_at), score: 0.8 RPGRIP1retinitis pigmentosa GTPase regulator interacting protein 1 (206608_s_at), score: 1 RPH3Arabphilin 3A homolog (mouse) (205230_at), score: 0.61 RRHretinal pigment epithelium-derived rhodopsin homolog (208314_at), score: 0.64 S100A14S100 calcium binding protein A14 (218677_at), score: 0.62 SCN10Asodium channel, voltage-gated, type X, alpha subunit (208578_at), score: 0.65 SIRPB1signal-regulatory protein beta 1 (206934_at), score: 0.74 SLC10A2solute carrier family 10 (sodium/bile acid cotransporter family), member 2 (207095_at), score: 0.77 SLC15A1solute carrier family 15 (oligopeptide transporter), member 1 (211349_at), score: 0.61 SLC26A4solute carrier family 26, member 4 (206529_x_at), score: 0.77 SLC28A3solute carrier family 28 (sodium-coupled nucleoside transporter), member 3 (220475_at), score: 0.61 SLCO1A2solute carrier organic anion transporter family, member 1A2 (207308_at), score: 0.76 SLCO1C1solute carrier organic anion transporter family, member 1C1 (220460_at), score: 0.62 SPAG6sperm associated antigen 6 (210033_s_at), score: 0.64 ST8SIA3ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 (208064_s_at), score: 0.63 TAAR2trace amine associated receptor 2 (221394_at), score: 0.68 TACR1tachykinin receptor 1 (208048_at), score: 0.98 TBX21T-box 21 (220684_at), score: 0.75 TMEM19transmembrane protein 19 (219941_at), score: 0.71 TP63tumor protein p63 (209863_s_at), score: 0.68 VGFVGF nerve growth factor inducible (205586_x_at), score: 0.71 ZNF335zinc finger protein 335 (78330_at), score: 0.72
| Id | sample | Experiment | ExpName | Array | Syndrome | Cell.line |
|---|---|---|---|---|---|---|
| E-TABM-263-raw-cel-1515485651.cel | 1 | 6 | Cycle | hgu133a2 | none | Cycle 1 |
| 2Twin.CEL | 2 | 2 | DS-twin | hgu133plus2 | none | DS-twin 2 |
| E-GEOD-3407-raw-cel-1437949557.cel | 1 | 4 | Cockayne | hgu133a | CS | eGFP |
| t21a 08-03.CEL | 4 | 1 | DS-CC | hgu133a | Down | DS-CC 4 |
| E-TABM-263-raw-cel-1515486251.cel | 31 | 6 | Cycle | hgu133a2 | none | Cycle 1 |
| ctrl a 08-03.CEL | 1 | 1 | DS-CC | hgu133a | none | DS-CC 1 |
