Previous module | Next module Module #761, TG: 2.6, TC: 1.4, 139 probes, 139 Entrez genes, 17 conditions

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Expression data for module #761

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Under-expression is coded with green, over-expression with red color.

Help | Hide | Top The GO tree — Biological processes

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Help | Hide | Top The GO tree — Cellular Components

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cellular_component

The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together.

cell

The basic structural and functional unit of all organisms. Includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope.

endomembrane system

A collection of membranous structures involved in transport within the cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles.

cell part

Any constituent part of a cell, the basic structural and functional unit of all organisms.

all

This term is the most general term possible

cell part

Any constituent part of a cell, the basic structural and functional unit of all organisms.

Help | Hide | Top The GO tree — Molecular Function

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Help | Show | Top GO BP test for over-representation

Help | Show | Top GO CC test for over-representation

Help | Show | Top GO MF test for over-representation

Help | Hide | Top KEGG Pathway test for over-representation

No enriched terms

Help | Hide | Top miRNA test for over-representation

Id Pvalue ExpCount Count Size
miR-590/590-3p 4.930e-02 10.56 26
 513

Help | Hide | Top Chromosome test for over-representation

No enriched terms

Help | Hide | Top Genes

Entrez genes

AAASachalasia, adrenocortical insufficiency, alacrimia (Allgrove, triple-A) (218075_at), score: -0.64 ABCE1ATP-binding cassette, sub-family E (OABP), member 1 (201873_s_at), score: 0.77 ABI1abl-interactor 1 (209028_s_at), score: 0.8 ACAP2ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 (212476_at), score: 0.76 ACSL1acyl-CoA synthetase long-chain family member 1 (201963_at), score: 0.79 ACSL4acyl-CoA synthetase long-chain family member 4 (202422_s_at), score: 0.72 ADORA2Badenosine A2b receptor (205891_at), score: -0.56 AHI1Abelson helper integration site 1 (221569_at), score: 0.74 ARFGEF2ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) (218098_at), score: 0.88 ATF1activating transcription factor 1 (222103_at), score: 0.77 ATG12ATG12 autophagy related 12 homolog (S. cerevisiae) (213026_at), score: 0.76 ATP2C1ATPase, Ca++ transporting, type 2C, member 1 (211137_s_at), score: 0.84 AVL9AVL9 homolog (S. cerevisiase) (212474_at), score: 0.82 BBS10Bardet-Biedl syndrome 10 (219487_at), score: 0.81 BNIP2BCL2/adenovirus E1B 19kDa interacting protein 2 (209308_s_at), score: 0.89 C10orf97chromosome 10 open reading frame 97 (218297_at), score: 0.81 C14orf138chromosome 14 open reading frame 138 (218940_at), score: 0.85 C14orf94chromosome 14 open reading frame 94 (218383_at), score: -0.59 C1DC1D nuclear receptor co-repressor (200056_s_at), score: 0.74 C1orf103chromosome 1 open reading frame 103 (220235_s_at), score: 0.74 C5orf22chromosome 5 open reading frame 22 (203738_at), score: 0.85 C5orf28chromosome 5 open reading frame 28 (219029_at), score: 0.85 C5orf44chromosome 5 open reading frame 44 (218674_at), score: 0.79 C9orf82chromosome 9 open reading frame 82 (219276_x_at), score: 0.78 CAPZA2capping protein (actin filament) muscle Z-line, alpha 2 (201237_at), score: 0.8 CCNFcyclin F (204826_at), score: -0.56 CCNT2cyclin T2 (204645_at), score: 0.79 CD2APCD2-associated protein (203593_at), score: 0.73 CDC25Bcell division cycle 25 homolog B (S. pombe) (201853_s_at), score: -0.62 CHMP5chromatin modifying protein 5 (218085_at), score: 0.77 CHORDC1cysteine and histidine-rich domain (CHORD)-containing 1 (218566_s_at), score: 0.78 CHUKconserved helix-loop-helix ubiquitous kinase (209666_s_at), score: 0.84 CMPK1cytidine monophosphate (UMP-CMP) kinase 1, cytosolic (217870_s_at), score: 0.87 CSGALNACT2chondroitin sulfate N-acetylgalactosaminyltransferase 2 (222235_s_at), score: 0.97 DNAJB14DnaJ (Hsp40) homolog, subfamily B, member 14 (219237_s_at), score: 0.85 DNAJB9DnaJ (Hsp40) homolog, subfamily B, member 9 (202843_at), score: 0.88 DNAJC24DnaJ (Hsp40) homolog, subfamily C, member 24 (213853_at), score: 0.76 EDEM1ER degradation enhancer, mannosidase alpha-like 1 (203279_at), score: 0.82 EIF2AK3eukaryotic translation initiation factor 2-alpha kinase 3 (218696_at), score: 0.86 EIF2S1eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa (201143_s_at), score: 0.72 EIF4Eeukaryotic translation initiation factor 4E (201436_at), score: 0.74 ERBB2IPerbb2 interacting protein (217941_s_at), score: 0.85 EVI5ecotropic viral integration site 5 (209717_at), score: 0.74 FAM18Bfamily with sequence similarity 18, member B (218446_s_at), score: 0.95 FAM3Cfamily with sequence similarity 3, member C (201889_at), score: 0.75 FAM8A1family with sequence similarity 8, member A1 (203420_at), score: 0.77 FBXO3F-box protein 3 (218432_at), score: 0.78 FRG1FSHD region gene 1 (204145_at), score: 0.73 FUBP3far upstream element (FUSE) binding protein 3 (212824_at), score: 0.75 GCC2GRIP and coiled-coil domain containing 2 (202832_at), score: 0.81 GMCL1germ cell-less homolog 1 (Drosophila) (218458_at), score: 0.86 GRSF1G-rich RNA sequence binding factor 1 (201501_s_at), score: 0.75 HISPPD1histidine acid phosphatase domain containing 1 (203253_s_at), score: 0.88 HNRNPH2heterogeneous nuclear ribonucleoprotein H2 (H') (201132_at), score: 0.83 IMPACTImpact homolog (mouse) (218637_at), score: 0.76 ITSN2intersectin 2 (209898_x_at), score: 0.79 JMJD1Cjumonji domain containing 1C (221763_at), score: 0.98 KIAA0562KIAA0562 (204075_s_at), score: 0.78 KIAA1109KIAA1109 (212779_at), score: 0.75 LARP4La ribonucleoprotein domain family, member 4 (214155_s_at), score: 0.86 LOC220594TL132 protein (213510_x_at), score: 0.75 LPGAT1lysophosphatidylglycerol acyltransferase 1 (202651_at), score: 0.83 LRRC40leucine rich repeat containing 40 (218577_at), score: 0.75 MAPK6mitogen-activated protein kinase 6 (207121_s_at), score: 0.72 MATR3matrin 3 (200626_s_at), score: 0.81 MED23mediator complex subunit 23 (218846_at), score: 0.74 MEX3Cmex-3 homolog C (C. elegans) (218247_s_at), score: 0.77 MFAP3microfibrillar-associated protein 3 (213123_at), score: 0.82 MORC3MORC family CW-type zinc finger 3 (213000_at), score: 0.76 MOSPD1motile sperm domain containing 1 (218853_s_at), score: 0.73 MYO6myosin VI (203216_s_at), score: 0.72 NARG1LNMDA receptor regulated 1-like (219378_at), score: 0.72 NAT13N-acetyltransferase 13 (GCN5-related) (217745_s_at), score: 0.73 NDPNorrie disease (pseudoglioma) (206022_at), score: -0.59 NDUFA5NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa (201304_at), score: 0.81 NECAP1NECAP endocytosis associated 1 (209300_s_at), score: 0.73 NUDT1nudix (nucleoside diphosphate linked moiety X)-type motif 1 (204766_s_at), score: -0.57 OPA1optic atrophy 1 (autosomal dominant) (212213_x_at), score: 0.94 OSBPL8oxysterol binding protein-like 8 (212582_at), score: 0.79 OSTM1osteopetrosis associated transmembrane protein 1 (218196_at), score: 0.86 PAQR3progestin and adipoQ receptor family member III (213372_at), score: 0.78 PCNPPEST proteolytic signal containing nuclear protein (217816_s_at), score: 0.74 PCTK2PCTAIRE protein kinase 2 (221918_at), score: 0.83 PIP5K3phosphatidylinositol-3-phosphate/phosphatidylinositol 5-kinase, type III (213111_at), score: 0.73 PJA2praja ring finger 2 (201133_s_at), score: 0.73 PNPLA2patatin-like phospholipase domain containing 2 (212705_x_at), score: -0.63 PPFIA1protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 (202066_at), score: 0.81 PTP4A1protein tyrosine phosphatase type IVA, member 1 (200730_s_at), score: 0.73 RAB1ARAB1A, member RAS oncogene family (213440_at), score: 0.77 RAB21RAB21, member RAS oncogene family (203885_at), score: 0.77 RAB7ARAB7A, member RAS oncogene family (211960_s_at), score: 0.82 RANBP6RAN binding protein 6 (213019_at), score: 0.83 RB1CC1RB1-inducible coiled-coil 1 (202034_x_at), score: 0.87 RNF11ring finger protein 11 (208924_at), score: 0.82 RNF138ring finger protein 138 (218738_s_at), score: 0.74 RP2retinitis pigmentosa 2 (X-linked recessive) (205191_at), score: 0.83 RSL24D1ribosomal L24 domain containing 1 (217915_s_at), score: 0.73 SACM1LSAC1 suppressor of actin mutations 1-like (yeast) (202797_at), score: 0.74 SCAMP4secretory carrier membrane protein 4 (213244_at), score: -0.59 SEC24BSEC24 family, member B (S. cerevisiae) (202798_at), score: 0.86 SENP6SUMO1/sentrin specific peptidase 6 (202318_s_at), score: 0.79 SERINC1serine incorporator 1 (208671_at), score: 0.76 SHOC2soc-2 suppressor of clear homolog (C. elegans) (202777_at), score: 0.74 SLC2A3P1solute carrier family 2 (facilitated glucose transporter), member 3 pseudogene 1 (221751_at), score: 0.76 SLC33A1solute carrier family 33 (acetyl-CoA transporter), member 1 (203165_s_at), score: 0.78 SLC35A3solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3 (206770_s_at), score: 0.76 SLC43A3solute carrier family 43, member 3 (213113_s_at), score: -0.61 SLKSTE20-like kinase (yeast) (206875_s_at), score: 0.74 SLMO2slowmo homolog 2 (Drosophila) (217851_s_at), score: 0.91 SNRNP27small nuclear ribonucleoprotein 27kDa (U4/U6.U5) (212440_at), score: 0.78 SOS2son of sevenless homolog 2 (Drosophila) (212870_at), score: 0.75 SPASTspastin (209748_at), score: 0.75 SS18L1synovial sarcoma translocation gene on chromosome 18-like 1 (213140_s_at), score: 0.72 STRN3striatin, calmodulin binding protein 3 (204496_at), score: 0.8 STXBP3syntaxin binding protein 3 (203310_at), score: 0.83 SYNJ1synaptojanin 1 (212990_at), score: 0.85 SYPL1synaptophysin-like 1 (201260_s_at), score: 0.74 TAF2TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa (209523_at), score: 0.83 TFB2Mtranscription factor B2, mitochondrial (218605_at), score: 0.82 TGDSTDP-glucose 4,6-dehydratase (208249_s_at), score: 0.99 TICAM2toll-like receptor adaptor molecule 2 (214658_at), score: 0.96 TM9SF3transmembrane 9 superfamily member 3 (217758_s_at), score: 0.75 TMED7transmembrane emp24 protein transport domain containing 7 (209404_s_at), score: 0.82 TMEM123transmembrane protein 123 (211967_at), score: 0.82 TMEM30Atransmembrane protein 30A (217743_s_at), score: 0.89 TMF1TATA element modulatory factor 1 (213024_at), score: 1 TOMM20translocase of outer mitochondrial membrane 20 homolog (yeast) (200662_s_at), score: 0.81 TOPORStopoisomerase I binding, arginine/serine-rich (204071_s_at), score: 0.73 TRAPPC2trafficking protein particle complex 2 (219351_at), score: 0.78 TSNAXtranslin-associated factor X (203983_at), score: 0.76 UBE2Wubiquitin-conjugating enzyme E2W (putative) (218521_s_at), score: 0.78 UFM1ubiquitin-fold modifier 1 (218050_at), score: 0.93 UHRF1BP1LUHRF1 binding protein 1-like (213118_at), score: 0.9 VPS13Cvacuolar protein sorting 13 homolog C (S. cerevisiae) (218396_at), score: 0.72 YTHDC2YTH domain containing 2 (213077_at), score: 0.84 YTHDF3YTH domain family, member 3 (221749_at), score: 0.74 ZC3H14zinc finger CCCH-type containing 14 (213064_at), score: 0.79 ZDHHC17zinc finger, DHHC-type containing 17 (212982_at), score: 0.8 ZNF23zinc finger protein 23 (KOX 16) (213934_s_at), score: 0.77

Non-Entrez genes

Unknown, score:

Help | Hide | Top Conditions

Id sample Experiment ExpName Array Syndrome Cell.line
E-GEOD-4219-raw-cel-1311956321.cel 9 7 Sph-mono hgu133plus2 none Sph-mon 1
10590_WBS.CEL 2 8 WBS hgu133plus2 WBS WBS 1
E-TABM-263-raw-cel-1515486211.cel 29 6 Cycle hgu133a2 none Cycle 1
E-GEOD-4219-raw-cel-1311956614.cel 18 7 Sph-mono hgu133plus2 none Sph-mon 1
t21b 08-03.CEL 5 1 DS-CC hgu133a Down DS-CC 5
ctrl a 08-03.CEL 1 1 DS-CC hgu133a none DS-CC 1
t21a 08-03.CEL 4 1 DS-CC hgu133a Down DS-CC 4
E-TABM-263-raw-cel-1515485691.cel 3 6 Cycle hgu133a2 none Cycle 1
E-TABM-263-raw-cel-1515485651.cel 1 6 Cycle hgu133a2 none Cycle 1
E-TABM-263-raw-cel-1515486091.cel 23 6 Cycle hgu133a2 none Cycle 1
E-TABM-263-raw-cel-1515485771.cel 7 6 Cycle hgu133a2 none Cycle 1
E-GEOD-4219-raw-cel-1311956275.cel 8 7 Sph-mono hgu133plus2 none Sph-mon 1
E-GEOD-4219-raw-cel-1311956634.cel 19 7 Sph-mono hgu133plus2 none Sph-mon 1
E-GEOD-4219-raw-cel-1311956398.cel 12 7 Sph-mono hgu133plus2 none Sph-mon 1
E-TABM-263-raw-cel-1515485811.cel 9 6 Cycle hgu133a2 none Cycle 1
E-TABM-263-raw-cel-1515486371.cel 37 6 Cycle hgu133a2 none Cycle 1
E-TABM-263-raw-cel-1515485891.cel 13 6 Cycle hgu133a2 none Cycle 1

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