Under-expression is coded with green,
over-expression with red color.
plasma membrane
The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
membrane
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
extracellular region
The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
cellular_component
The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together.
cell
The basic structural and functional unit of all organisms. Includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope.
membrane part
Any constituent part of a membrane, a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
plasma membrane part
Any constituent part of the plasma membrane, the membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
cell part
Any constituent part of a cell, the basic structural and functional unit of all organisms.
all
This term is the most general term possible
cell part
Any constituent part of a cell, the basic structural and functional unit of all organisms.
membrane part
Any constituent part of a membrane, a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
plasma membrane part
Any constituent part of the plasma membrane, the membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
ABCA7ATP-binding cassette, sub-family A (ABC1), member 7 (219577_s_at), score: 0.87 ABLIM1actin binding LIM protein 1 (200965_s_at), score: -0.61 ACTN3actinin, alpha 3 (206891_at), score: 0.59 ADAMDEC1ADAM-like, decysin 1 (206134_at), score: -0.57 ADAMTS7ADAM metallopeptidase with thrombospondin type 1 motif, 7 (220705_s_at), score: 0.72 ADCK2aarF domain containing kinase 2 (221893_s_at), score: -0.66 ADORA1adenosine A1 receptor (216220_s_at), score: 0.6 ALDH1L1aldehyde dehydrogenase 1 family, member L1 (215798_at), score: 0.69 ALDH3A1aldehyde dehydrogenase 3 family, memberA1 (205623_at), score: 0.7 AP1G2adaptor-related protein complex 1, gamma 2 subunit (201613_s_at), score: 0.57 APOC4apolipoprotein C-IV (206738_at), score: 0.63 ARHGAP22Rho GTPase activating protein 22 (206298_at), score: -0.67 ASPHD1aspartate beta-hydroxylase domain containing 1 (214993_at), score: 0.64 ATMataxia telangiectasia mutated (210858_x_at), score: 0.7 ATP8B2ATPase, class I, type 8B, member 2 (216873_s_at), score: 0.63 BAP1BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase) (201419_at), score: -0.58 BAT2HLA-B associated transcript 2 (212081_x_at), score: -0.71 BAT2LHLA-B associated transcript 2-like (212068_s_at), score: -0.64 BCAMbasal cell adhesion molecule (Lutheran blood group) (40093_at), score: 0.69 BCL2L1BCL2-like 1 (215037_s_at), score: -0.65 BTNL3butyrophilin-like 3 (217207_s_at), score: 0.68 C19orf61chromosome 19 open reading frame 61 (221335_x_at), score: -0.71 C20orf111chromosome 20 open reading frame 111 (209020_at), score: 0.64 C21orf2chromosome 21 open reading frame 2 (203996_s_at), score: 0.6 C2orf37chromosome 2 open reading frame 37 (220172_at), score: -0.64 C2orf72chromosome 2 open reading frame 72 (213143_at), score: 0.61 C7orf58chromosome 7 open reading frame 58 (220032_at), score: -0.65 CASP7caspase 7, apoptosis-related cysteine peptidase (207181_s_at), score: 0.68 CCDC94coiled-coil domain containing 94 (204335_at), score: 0.6 CD79BCD79b molecule, immunoglobulin-associated beta (205297_s_at), score: 0.88 CDC42BPBCDC42 binding protein kinase beta (DMPK-like) (217849_s_at), score: -0.69 CDK10cyclin-dependent kinase 10 (203468_at), score: 0.58 CHRNB2cholinergic receptor, nicotinic, beta 2 (neuronal) (206635_at), score: 0.75 CITcitron (rho-interacting, serine/threonine kinase 21) (212801_at), score: -0.65 CLTCL1clathrin, heavy chain-like 1 (205944_s_at), score: 0.58 CMAHcytidine monophosphate-N-acetylneuraminic acid hydroxylase (CMP-N-acetylneuraminate monooxygenase) pseudogene (205518_s_at), score: -0.58 CNNM1cyclin M1 (220166_at), score: 0.68 CNOT3CCR4-NOT transcription complex, subunit 3 (203239_s_at), score: -0.71 COL11A2collagen, type XI, alpha 2 (216993_s_at), score: 0.7 COL16A1collagen, type XVI, alpha 1 (204345_at), score: 0.57 CORO2Bcoronin, actin binding protein, 2B (209789_at), score: -0.58 COX6A2cytochrome c oxidase subunit VIa polypeptide 2 (206353_at), score: 0.64 CRHR1corticotropin releasing hormone receptor 1 (208593_x_at), score: 0.67 CYP3A4cytochrome P450, family 3, subfamily A, polypeptide 4 (205998_x_at), score: 0.7 CYTH4cytohesin 4 (219183_s_at), score: 0.7 DCBLD2discoidin, CUB and LCCL domain containing 2 (213865_at), score: -0.59 DENND4BDENN/MADD domain containing 4B (202860_at), score: -0.56 DHRS11dehydrogenase/reductase (SDR family) member 11 (218756_s_at), score: -0.58 DMBT1deleted in malignant brain tumors 1 (208250_s_at), score: 0.81 DSCR6Down syndrome critical region gene 6 (207267_s_at), score: -0.72 DSPPdentin sialophosphoprotein (221681_s_at), score: 0.8 DUSP9dual specificity phosphatase 9 (205777_at), score: 0.61 EDARectodysplasin A receptor (220048_at), score: 0.59 EMCNendomucin (219436_s_at), score: -0.65 EPB41L5erythrocyte membrane protein band 4.1 like 5 (220977_x_at), score: 0.59 EPHA4EPH receptor A4 (206114_at), score: 0.57 EPM2Aepilepsy, progressive myoclonus type 2A, Lafora disease (laforin) (205231_s_at), score: 0.79 ETNK2ethanolamine kinase 2 (219268_at), score: 0.57 ETV7ets variant 7 (221680_s_at), score: 0.59 EVLEnah/Vasp-like (217838_s_at), score: -0.59 F10coagulation factor X (205620_at), score: 0.58 FBP1fructose-1,6-bisphosphatase 1 (209696_at), score: 0.63 FBXL14F-box and leucine-rich repeat protein 14 (213145_at), score: -0.59 FBXO2F-box protein 2 (219305_x_at), score: 0.82 FCER1GFc fragment of IgE, high affinity I, receptor for; gamma polypeptide (204232_at), score: 0.57 FGL1fibrinogen-like 1 (205305_at), score: 0.68 FKBP10FK506 binding protein 10, 65 kDa (219249_s_at), score: 0.72 FKRPfukutin related protein (219853_at), score: -0.84 FLRT3fibronectin leucine rich transmembrane protein 3 (219250_s_at), score: -0.6 FMO3flavin containing monooxygenase 3 (40665_at), score: -0.71 FOXK2forkhead box K2 (203064_s_at), score: -0.75 GABARAPL1GABA(A) receptor-associated protein like 1 (208868_s_at), score: 0.68 GABARAPL3GABA(A) receptors associated protein like 3 (pseudogene) (211458_s_at), score: 0.7 GBA3glucosidase, beta, acid 3 (cytosolic) (219954_s_at), score: 0.69 GDF9growth differentiation factor 9 (221314_at), score: 0.75 GGA3golgi associated, gamma adaptin ear containing, ARF binding protein 3 (209411_s_at), score: -0.56 GGT1gamma-glutamyltransferase 1 (209919_x_at), score: 0.57 GGTLC1gamma-glutamyltransferase light chain 1 (211416_x_at), score: 0.67 GNL3LPguanine nucleotide binding protein-like 3 (nucleolar)-like pseudogene (220716_at), score: 0.67 GP1BAglycoprotein Ib (platelet), alpha polypeptide (207389_at), score: 0.57 GPR144G protein-coupled receptor 144 (216289_at), score: 1 HAB1B1 for mucin (215778_x_at), score: 0.92 HAMPhepcidin antimicrobial peptide (220491_at), score: 0.81 HAO2hydroxyacid oxidase 2 (long chain) (220801_s_at), score: 0.63 HIST1H4Dhistone cluster 1, H4d (208076_at), score: 0.69 HLA-DQB1major histocompatibility complex, class II, DQ beta 1 (211654_x_at), score: 0.58 HMGA1high mobility group AT-hook 1 (210457_x_at), score: -0.75 HOXB5homeobox B5 (205601_s_at), score: 0.64 HSD17B6hydroxysteroid (17-beta) dehydrogenase 6 homolog (mouse) (37512_at), score: 0.61 HSPA4Lheat shock 70kDa protein 4-like (205543_at), score: -0.59 IDUAiduronidase, alpha-L- (205059_s_at), score: -0.65 IFT140intraflagellar transport 140 homolog (Chlamydomonas) (204792_s_at), score: 0.65 IGHG1immunoglobulin heavy constant gamma 1 (G1m marker) (217039_x_at), score: 0.6 IGHMBP2immunoglobulin mu binding protein 2 (215980_s_at), score: 0.58 INAinternexin neuronal intermediate filament protein, alpha (204465_s_at), score: -0.58 INE1inactivation escape 1 (non-protein coding) (207252_at), score: 0.7 IRF2interferon regulatory factor 2 (203275_at), score: -0.61 ITGALintegrin, alpha L (antigen CD11A (p180), lymphocyte function-associated antigen 1; alpha polypeptide) (213475_s_at), score: 0.8 ITGB3integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61) (204628_s_at), score: 0.58 JAG2jagged 2 (32137_at), score: 0.57 JAK2Janus kinase 2 (a protein tyrosine kinase) (205842_s_at), score: -0.56 JUPjunction plakoglobin (201015_s_at), score: -0.67 KCTD15potassium channel tetramerisation domain containing 15 (218553_s_at), score: 0.69 KCTD17potassium channel tetramerisation domain containing 17 (205561_at), score: 0.57 KIF26Bkinesin family member 26B (220002_at), score: 0.82 KLF7Kruppel-like factor 7 (ubiquitous) (204334_at), score: 0.56 KRT8P12keratin 8 pseudogene 12 (222060_at), score: 0.57 LARSleucyl-tRNA synthetase (217810_x_at), score: 0.63 LEPREL2leprecan-like 2 (204854_at), score: -0.65 LILRB3leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3 (211133_x_at), score: 0.69 LIMD1LIM domains containing 1 (218850_s_at), score: -0.61 LOC100129500hypothetical protein LOC100129500 (212884_x_at), score: 0.6 LOC100133105hypothetical protein LOC100133105 (214237_x_at), score: 0.61 LOC100133748similar to GTF2IRD2 protein (215569_at), score: 0.7 LOC149478hypothetical protein LOC149478 (215462_at), score: 0.61 LOC149501similar to keratin 8 (216821_at), score: 0.94 LOC440434hypothetical protein FLJ11822 (215090_x_at), score: -0.57 LOC80054hypothetical LOC80054 (220465_at), score: 0.7 LPHN1latrophilin 1 (203488_at), score: 0.69 LRDDleucine-rich repeats and death domain containing (221640_s_at), score: -0.58 LRP2low density lipoprotein-related protein 2 (205710_at), score: -0.56 LRRC37A2leucine rich repeat containing 37, member A2 (221740_x_at), score: 0.6 LY6G5Clymphocyte antigen 6 complex, locus G5C (219860_at), score: -0.58 MALmal, T-cell differentiation protein (204777_s_at), score: 0.7 MAP1Smicrotubule-associated protein 1S (218522_s_at), score: -0.62 MAP3K6mitogen-activated protein kinase kinase kinase 6 (219278_at), score: -0.74 MAPRE3microtubule-associated protein, RP/EB family, member 3 (203842_s_at), score: 0.69 MDM2Mdm2 p53 binding protein homolog (mouse) (205386_s_at), score: -0.59 MGAT1mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (201126_s_at), score: -0.56 MOBPmyelin-associated oligodendrocyte basic protein (210193_at), score: 0.66 MOCS1molybdenum cofactor synthesis 1 (211673_s_at), score: 0.79 MPP2membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2) (213270_at), score: 0.58 MRPS6mitochondrial ribosomal protein S6 (213167_s_at), score: -0.84 MTMR11myotubularin related protein 11 (205076_s_at), score: -0.74 MUC5ACmucin 5AC, oligomeric mucus/gel-forming (217182_at), score: 0.8 MYL4myosin, light chain 4, alkali; atrial, embryonic (210088_x_at), score: 0.58 NDPNorrie disease (pseudoglioma) (206022_at), score: -0.62 NF1neurofibromin 1 (211094_s_at), score: -0.59 NFYCnuclear transcription factor Y, gamma (202215_s_at), score: -0.69 NOL10nucleolar protein 10 (218591_s_at), score: 0.62 NOVA2neuro-oncological ventral antigen 2 (206477_s_at), score: 0.7 NPIPL2nuclear pore complex interacting protein-like 2 (221992_at), score: 0.57 NUPL2nucleoporin like 2 (204003_s_at), score: 0.65 NXPH3neurexophilin 3 (221991_at), score: 0.75 OAS32'-5'-oligoadenylate synthetase 3, 100kDa (218400_at), score: -0.62 OLFML2Bolfactomedin-like 2B (213125_at), score: -0.76 OLR1oxidized low density lipoprotein (lectin-like) receptor 1 (210004_at), score: 0.58 OPRL1opiate receptor-like 1 (206564_at), score: 0.59 OR7E47Polfactory receptor, family 7, subfamily E, member 47 pseudogene (216698_x_at), score: 0.6 PAK1p21 protein (Cdc42/Rac)-activated kinase 1 (209615_s_at), score: -0.67 PARD6Apar-6 partitioning defective 6 homolog alpha (C. elegans) (205245_at), score: 0.62 PARVBparvin, beta (204629_at), score: -0.58 PGCprogastricsin (pepsinogen C) (205261_at), score: 0.57 PGK2phosphoglycerate kinase 2 (217009_at), score: 0.63 PIP5K1Cphosphatidylinositol-4-phosphate 5-kinase, type I, gamma (212518_at), score: -0.59 PKLRpyruvate kinase, liver and RBC (222078_at), score: 0.74 PMS2L2postmeiotic segregation increased 2-like 2 pseudogene (215410_at), score: 0.71 PNMAL1PNMA-like 1 (218824_at), score: -0.58 POM121POM121 membrane glycoprotein (rat) (212178_s_at), score: -0.59 PPP1R13Bprotein phosphatase 1, regulatory (inhibitor) subunit 13B (216347_s_at), score: 0.69 PRB3proline-rich protein BstNI subfamily 3 (206998_x_at), score: 0.58 PRLHprolactin releasing hormone (221443_x_at), score: 0.7 PTPN6protein tyrosine phosphatase, non-receptor type 6 (206687_s_at), score: 0.89 PXNpaxillin (211823_s_at), score: -0.81 RAB40BRAB40B, member RAS oncogene family (217597_x_at), score: 0.63 RBM12BRNA binding motif protein 12B (51228_at), score: -0.58 RBM38RNA binding motif protein 38 (212430_at), score: 0.67 REG3Aregenerating islet-derived 3 alpha (205815_at), score: 0.6 RNF220ring finger protein 220 (219988_s_at), score: -0.7 RPL10P16ribosomal protein L10 pseudogene 16 (217680_x_at), score: 0.67 RPL18AP6ribosomal protein L18a pseudogene 6 (216383_at), score: 0.75 RPRD2regulation of nuclear pre-mRNA domain containing 2 (212553_at), score: -0.65 RPS17P5ribosomal protein S17 pseudogene 5 (216348_at), score: 0.59 RPS6KA4ribosomal protein S6 kinase, 90kDa, polypeptide 4 (204632_at), score: -0.66 SAA4serum amyloid A4, constitutive (207096_at), score: 0.82 SCAMP4secretory carrier membrane protein 4 (213244_at), score: -0.66 SEC61A2Sec61 alpha 2 subunit (S. cerevisiae) (219499_at), score: -0.76 SEMA3Fsema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F (35666_at), score: 0.63 SEPT5septin 5 (209767_s_at), score: 0.68 SH2B3SH2B adaptor protein 3 (203320_at), score: -0.59 SH2D3ASH2 domain containing 3A (222169_x_at), score: 0.8 SIGLEC1sialic acid binding Ig-like lectin 1, sialoadhesin (44673_at), score: 0.7 SIRT6sirtuin (silent mating type information regulation 2 homolog) 6 (S. cerevisiae) (219613_s_at), score: -0.75 SLC26A10solute carrier family 26, member 10 (214951_at), score: 0.58 SLC29A1solute carrier family 29 (nucleoside transporters), member 1 (201801_s_at), score: -0.67 SLC2A1solute carrier family 2 (facilitated glucose transporter), member 1 (201250_s_at), score: 0.57 SLC30A4solute carrier family 30 (zinc transporter), member 4 (207362_at), score: -0.62 SLC43A1solute carrier family 43, member 1 (204394_at), score: 0.63 SLC43A3solute carrier family 43, member 3 (213113_s_at), score: -0.58 SLC5A5solute carrier family 5 (sodium iodide symporter), member 5 (211123_at), score: 0.72 SLC6A11solute carrier family 6 (neurotransmitter transporter, GABA), member 11 (207048_at), score: 0.68 SLCO2A1solute carrier organic anion transporter family, member 2A1 (204368_at), score: 0.59 SMG7Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans) (201794_s_at), score: -0.57 SOLHsmall optic lobes homolog (Drosophila) (204275_at), score: -0.64 SPATA1spermatogenesis associated 1 (221057_at), score: 0.71 SPATA2Lspermatogenesis associated 2-like (214965_at), score: 0.6 SPG7spastic paraplegia 7 (pure and complicated autosomal recessive) (202104_s_at), score: -0.59 SSX3synovial sarcoma, X breakpoint 3 (211731_x_at), score: 0.75 ST6GAL1ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 (201998_at), score: 0.57 ST8SIA3ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 (208064_s_at), score: 0.74 STIM1stromal interaction molecule 1 (202764_at), score: -0.58 SYT1synaptotagmin I (203999_at), score: -0.58 TAF15TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa (202840_at), score: 0.67 TGFBR2transforming growth factor, beta receptor II (70/80kDa) (207334_s_at), score: -0.61 TGIF2TGFB-induced factor homeobox 2 (216262_s_at), score: 0.6 TLE6transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila) (222219_s_at), score: 0.68 TMCC2transmembrane and coiled-coil domain family 2 (213096_at), score: 0.69 TMPRSS6transmembrane protease, serine 6 (214955_at), score: 0.65 TMSB4Ythymosin beta 4, Y-linked (206769_at), score: 0.76 TNFRSF8tumor necrosis factor receptor superfamily, member 8 (206729_at), score: 0.65 TNK1tyrosine kinase, non-receptor, 1 (217149_x_at), score: 0.63 TOM1L2target of myb1-like 2 (chicken) (214840_at), score: -0.6 TP53TG1TP53 target 1 (non-protein coding) (210241_s_at), score: 0.69 TRAPPC9trafficking protein particle complex 9 (221836_s_at), score: 0.62 TRMT2ATRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae) (91617_at), score: 0.56 TULP2tubby like protein 2 (206733_at), score: 0.67 TWISTNBTWIST neighbor (214729_at), score: -0.64 TXNthioredoxin (216609_at), score: 0.57 VEGFBvascular endothelial growth factor B (203683_s_at), score: -0.7 VPS37Bvacuolar protein sorting 37 homolog B (S. cerevisiae) (221704_s_at), score: -0.56 WDR6WD repeat domain 6 (217734_s_at), score: -0.56 WFDC8WAP four-disulfide core domain 8 (215276_at), score: 0.57 WNT2Bwingless-type MMTV integration site family, member 2B (206459_s_at), score: 0.75 YES1v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1 (202932_at), score: -0.58 YPEL1yippee-like 1 (Drosophila) (206063_x_at), score: 0.62 ZFYVE26zinc finger, FYVE domain containing 26 (37943_at), score: 0.6 ZNF192zinc finger protein 192 (206579_at), score: -0.71 ZNF281zinc finger protein 281 (218401_s_at), score: 0.68 ZNF318zinc finger protein 318 (203521_s_at), score: -0.58 ZNF783zinc finger family member 783 (221876_at), score: 0.63
| Id | sample | Experiment | ExpName | Array | Syndrome | Cell.line |
|---|---|---|---|---|---|---|
| E-TABM-263-raw-cel-1515485711.cel | 4 | 6 | Cycle | hgu133a2 | none | Cycle 1 |
| E-TABM-263-raw-cel-1515485691.cel | 3 | 6 | Cycle | hgu133a2 | none | Cycle 1 |
| E-TABM-263-raw-cel-1515485871.cel | 12 | 6 | Cycle | hgu133a2 | none | Cycle 1 |
| E-TABM-263-raw-cel-1515485951.cel | 16 | 6 | Cycle | hgu133a2 | none | Cycle 1 |
| E-TABM-263-raw-cel-1515486071.cel | 22 | 6 | Cycle | hgu133a2 | none | Cycle 1 |
| E-TABM-263-raw-cel-1515485911.cel | 14 | 6 | Cycle | hgu133a2 | none | Cycle 1 |
| E-TABM-263-raw-cel-1515486091.cel | 23 | 6 | Cycle | hgu133a2 | none | Cycle 1 |
| E-TABM-263-raw-cel-1515486431.cel | 40 | 6 | Cycle | hgu133a2 | none | Cycle 1 |
| E-TABM-263-raw-cel-1515485671.cel | 2 | 6 | Cycle | hgu133a2 | none | Cycle 1 |
