Under-expression is coded with green,
over-expression with red color.
extracellular region
The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
cellular_component
The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together.
proteinaceous extracellular matrix
A layer consisting mainly of proteins (especially collagen) and glycosaminoglycans (mostly as proteoglycans) that forms a sheet underlying or overlying cells such as endothelial and epithelial cells. The proteins are secreted by cells in the vicinity.
basement membrane
A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers.
extracellular matrix
A structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as in plants).
extracellular matrix part
Any constituent part of the extracellular matrix, the structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as often seen in plants).
extracellular region part
Any constituent part of the extracellular region, the space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers constituent parts of the host cell environment outside an intracellular parasite.
all
This term is the most general term possible
extracellular region part
Any constituent part of the extracellular region, the space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers constituent parts of the host cell environment outside an intracellular parasite.
extracellular matrix part
Any constituent part of the extracellular matrix, the structure lying external to one or more cells, which provides structural support for cells or tissues; may be completely external to the cell (as in animals) or be part of the cell (as often seen in plants).
basement membrane
A thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue. It consists of the basal lamina plus an associated layer of reticulin fibers.
A2Malpha-2-macroglobulin (217757_at), score: 0.55 ABCB1ATP-binding cassette, sub-family B (MDR/TAP), member 1 (209993_at), score: 1 ABCB4ATP-binding cassette, sub-family B (MDR/TAP), member 4 (207819_s_at), score: 0.63 ABHD14Aabhydrolase domain containing 14A (210006_at), score: -0.44 ACIN1apoptotic chromatin condensation inducer 1 (201715_s_at), score: 0.51 ACYP2acylphosphatase 2, muscle type (206833_s_at), score: -0.31 ADORA2Badenosine A2b receptor (205891_at), score: 0.46 AGPSalkylglycerone phosphate synthase (205401_at), score: 0.41 AHNAK2AHNAK nucleoprotein 2 (212992_at), score: -0.33 AIM2absent in melanoma 2 (206513_at), score: 0.62 AK5adenylate kinase 5 (219308_s_at), score: -0.32 AKAP8LA kinase (PRKA) anchor protein 8-like (218064_s_at), score: 0.51 AKR1B10aldo-keto reductase family 1, member B10 (aldose reductase) (206561_s_at), score: 0.48 ALDH9A1aldehyde dehydrogenase 9 family, member A1 (201612_at), score: -0.37 ANK3ankyrin 3, node of Ranvier (ankyrin G) (206385_s_at), score: 0.47 ANP32Aacidic (leucine-rich) nuclear phosphoprotein 32 family, member A (201043_s_at), score: 0.51 ANXA2P1annexin A2 pseudogene 1 (210876_at), score: -0.32 AOF2amine oxidase (flavin containing) domain 2 (212348_s_at), score: 0.41 APH1Banterior pharynx defective 1 homolog B (C. elegans) (221036_s_at), score: -0.37 APOBEC3Fapolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3F (214995_s_at), score: 0.46 APOBEC3Gapolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G (204205_at), score: 0.52 APOL3apolipoprotein L, 3 (221087_s_at), score: 0.41 ARHGAP1Rho GTPase activating protein 1 (202117_at), score: -0.38 ARSJarylsulfatase family, member J (219973_at), score: -0.37 ATP10AATPase, class V, type 10A (214255_at), score: -0.33 ATP6V1B2ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2 (201089_at), score: 0.55 ATP9AATPase, class II, type 9A (212062_at), score: -0.31 BAALCbrain and acute leukemia, cytoplasmic (218899_s_at), score: -0.43 BACE1beta-site APP-cleaving enzyme 1 (217904_s_at), score: -0.41 BAHD1bromo adjacent homology domain containing 1 (203051_at), score: 0.39 BAT1HLA-B associated transcript 1 (200041_s_at), score: 0.43 BAZ2Abromodomain adjacent to zinc finger domain, 2A (201353_s_at), score: 0.5 BCKDKbranched chain ketoacid dehydrogenase kinase (202030_at), score: -0.31 BHMT2betaine-homocysteine methyltransferase 2 (219902_at), score: 0.53 BRP44brain protein 44 (202427_s_at), score: -0.38 C10orf116chromosome 10 open reading frame 116 (203571_s_at), score: -0.37 C17orf70chromosome 17 open reading frame 70 (221800_s_at), score: -0.37 C17orf91chromosome 17 open reading frame 91 (214696_at), score: -0.34 C20orf149chromosome 20 open reading frame 149 (218010_x_at), score: -0.32 C22orf9chromosome 22 open reading frame 9 (217118_s_at), score: 0.45 C3orf64chromosome 3 open reading frame 64 (221935_s_at), score: -0.45 C4orf31chromosome 4 open reading frame 31 (219747_at), score: -0.45 C5orf23chromosome 5 open reading frame 23 (219054_at), score: -0.32 C5orf30chromosome 5 open reading frame 30 (221823_at), score: -0.53 CA3carbonic anhydrase III, muscle specific (204865_at), score: 0.58 CANXcalnexin (208853_s_at), score: 0.4 CARD10caspase recruitment domain family, member 10 (210026_s_at), score: 0.47 CAV2caveolin 2 (203323_at), score: -0.38 CBLL1Cas-Br-M (murine) ecotropic retroviral transforming sequence-like 1 (220018_at), score: 0.44 CCND2cyclin D2 (200953_s_at), score: 0.41 CCNG1cyclin G1 (208796_s_at), score: -0.36 CCNL2cyclin L2 (221427_s_at), score: 0.45 CD24CD24 molecule (209771_x_at), score: 0.44 CD248CD248 molecule, endosialin (219025_at), score: -0.41 CD68CD68 molecule (203507_at), score: -0.38 CD81CD81 molecule (200675_at), score: -0.39 CDC25Ccell division cycle 25 homolog C (S. pombe) (205167_s_at), score: 0.42 CDH18cadherin 18, type 2 (206280_at), score: -0.32 CDK2AP1cyclin-dependent kinase 2 associated protein 1 (201938_at), score: -0.32 CDKN1Acyclin-dependent kinase inhibitor 1A (p21, Cip1) (202284_s_at), score: -0.45 CDR2Lcerebellar degeneration-related protein 2-like (213230_at), score: -0.5 CHRM3cholinergic receptor, muscarinic 3 (214596_at), score: 0.4 CIB1calcium and integrin binding 1 (calmyrin) (201953_at), score: -0.32 CLINT1clathrin interactor 1 (201768_s_at), score: 0.4 CLUAP1clusterin associated protein 1 (204577_s_at), score: 0.44 CMAScytidine monophosphate N-acetylneuraminic acid synthetase (218111_s_at), score: 0.39 CNP2',3'-cyclic nucleotide 3' phosphodiesterase (208912_s_at), score: -0.32 COL11A1collagen, type XI, alpha 1 (37892_at), score: -0.47 COL7A1collagen, type VII, alpha 1 (217312_s_at), score: 0.51 COL8A1collagen, type VIII, alpha 1 (214587_at), score: -0.32 COL8A2collagen, type VIII, alpha 2 (221900_at), score: -0.31 COMPcartilage oligomeric matrix protein (205713_s_at), score: -0.37 COPZ2coatomer protein complex, subunit zeta 2 (219561_at), score: -0.46 CRTAPcartilage associated protein (201380_at), score: -0.56 CRYABcrystallin, alpha B (209283_at), score: -0.51 CSTF2cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa (204459_at), score: 0.41 CTBP1C-terminal binding protein 1 (213979_s_at), score: 0.41 CTNNBL1catenin, beta like 1 (221021_s_at), score: 0.48 CTSKcathepsin K (202450_s_at), score: -0.4 CTTNcortactin (201059_at), score: -0.35 CYBAcytochrome b-245, alpha polypeptide (203028_s_at), score: -0.3 CYFIP1cytoplasmic FMR1 interacting protein 1 (208923_at), score: -0.31 DBF4DBF4 homolog (S. cerevisiae) (204244_s_at), score: 0.42 DDAH1dimethylarginine dimethylaminohydrolase 1 (209094_at), score: -0.35 DDX17DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 (208151_x_at), score: 0.61 DDX3XDEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked (201211_s_at), score: 0.5 DGKDdiacylglycerol kinase, delta 130kDa (208072_s_at), score: 0.49 DHRS1dehydrogenase/reductase (SDR family) member 1 (213279_at), score: -0.31 DHX38DEAH (Asp-Glu-Ala-His) box polypeptide 38 (209178_at), score: 0.49 DHX9DEAH (Asp-Glu-Ala-His) box polypeptide 9 (212105_s_at), score: 0.44 DIAPH2diaphanous homolog 2 (Drosophila) (205603_s_at), score: -0.36 DIO2deiodinase, iodothyronine, type II (203699_s_at), score: 0.8 DIS3DIS3 mitotic control homolog (S. cerevisiae) (218362_s_at), score: -0.31 DSPdesmoplakin (200606_at), score: -0.32 DUSP14dual specificity phosphatase 14 (203367_at), score: -0.45 E4F1E4F transcription factor 1 (218524_at), score: 0.42 EAPPE2F-associated phosphoprotein (202623_at), score: 0.4 EBF2early B-cell factor 2 (220392_at), score: -0.34 ECM1extracellular matrix protein 1 (209365_s_at), score: -0.44 ECSITECSIT homolog (Drosophila) (218225_at), score: 0.46 EFEMP2EGF-containing fibulin-like extracellular matrix protein 2 (209356_x_at), score: -0.33 EPHB2EPH receptor B2 (209589_s_at), score: 0.67 EWSR1Ewing sarcoma breakpoint region 1 (209214_s_at), score: 0.43 FAM105Afamily with sequence similarity 105, member A (219694_at), score: 0.47 FAM108A1family with sequence similarity 108, member A1 (221267_s_at), score: -0.42 FAM169Afamily with sequence similarity 169, member A (213954_at), score: 0.61 FAM57Afamily with sequence similarity 57, member A (218898_at), score: -0.35 FAM60Afamily with sequence similarity 60, member A (220147_s_at), score: 0.47 FAM8A1family with sequence similarity 8, member A1 (203420_at), score: -0.34 FARP1FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived) (201911_s_at), score: -0.38 FAT1FAT tumor suppressor homolog 1 (Drosophila) (201579_at), score: -0.57 FBN2fibrillin 2 (203184_at), score: -0.34 FBXW7F-box and WD repeat domain containing 7 (218751_s_at), score: -0.33 FHOD3formin homology 2 domain containing 3 (218980_at), score: -0.35 FKBP4FK506 binding protein 4, 59kDa (200895_s_at), score: 0.42 FKBP9FK506 binding protein 9, 63 kDa (212169_at), score: -0.6 FLJ11151hypothetical protein FLJ11151 (218610_s_at), score: -0.34 FLRT2fibronectin leucine rich transmembrane protein 2 (204359_at), score: -0.33 FOLR3folate receptor 3 (gamma) (206371_at), score: -0.45 FOXD1forkhead box D1 (206307_s_at), score: -0.36 FOXF1forkhead box F1 (205935_at), score: 0.45 FOXF2forkhead box F2 (206377_at), score: 0.4 FUSfusion (involved in t(12;16) in malignant liposarcoma) (217370_x_at), score: 0.45 FZD1frizzled homolog 1 (Drosophila) (204451_at), score: -0.32 FZD3frizzled homolog 3 (Drosophila) (219683_at), score: 0.43 GABBR1gamma-aminobutyric acid (GABA) B receptor, 1 (203146_s_at), score: 0.4 GABBR2gamma-aminobutyric acid (GABA) B receptor, 2 (209990_s_at), score: -0.41 GAGE4G antigen 4 (207086_x_at), score: 0.91 GAGE6G antigen 6 (208155_x_at), score: 0.86 GALEUDP-galactose-4-epimerase (202528_at), score: 0.41 GALNT6UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 6 (GalNAc-T6) (219956_at), score: -0.39 GAS6growth arrest-specific 6 (202177_at), score: -0.48 GATA3GATA binding protein 3 (209604_s_at), score: 0.73 GBP1guanylate binding protein 1, interferon-inducible, 67kDa (202269_x_at), score: 0.42 GCLCglutamate-cysteine ligase, catalytic subunit (202923_s_at), score: 0.4 GHRgrowth hormone receptor (205498_at), score: -0.39 GLE1GLE1 RNA export mediator homolog (yeast) (206920_s_at), score: 0.44 GLSglutaminase (203159_at), score: -0.48 GLTPglycolipid transfer protein (219267_at), score: -0.43 GMDSGDP-mannose 4,6-dehydratase (204875_s_at), score: 0.47 GMPRguanosine monophosphate reductase (204187_at), score: 0.42 GNL3guanine nucleotide binding protein-like 3 (nucleolar) (217850_at), score: 0.45 GPR124G protein-coupled receptor 124 (221814_at), score: -0.35 GRK6G protein-coupled receptor kinase 6 (211543_s_at), score: 0.43 GSPT2G1 to S phase transition 2 (205541_s_at), score: -0.32 GSRglutathione reductase (205770_at), score: 0.45 GTF2H4general transcription factor IIH, polypeptide 4, 52kDa (203577_at), score: 0.44 H1F0H1 histone family, member 0 (208886_at), score: 0.41 HAPLN1hyaluronan and proteoglycan link protein 1 (205523_at), score: -0.35 HAS2hyaluronan synthase 2 (206432_at), score: -0.5 HERC5hect domain and RLD 5 (219863_at), score: 0.7 HGSNATheparan-alpha-glucosaminide N-acetyltransferase (218017_s_at), score: -0.58 HHEXhematopoietically expressed homeobox (215933_s_at), score: 0.45 HIPK2homeodomain interacting protein kinase 2 (219028_at), score: 0.46 HIST1H4Chistone cluster 1, H4c (205967_at), score: -0.42 HIST2H2AA3histone cluster 2, H2aa3 (214290_s_at), score: -0.4 HIVEP2human immunodeficiency virus type I enhancer binding protein 2 (212642_s_at), score: -0.48 HLA-DPA1major histocompatibility complex, class II, DP alpha 1 (211990_at), score: 0.49 HNRNPA1heterogeneous nuclear ribonucleoprotein A1 (214280_x_at), score: 0.4 HNRNPCheterogeneous nuclear ribonucleoprotein C (C1/C2) (200751_s_at), score: 0.46 HNRNPH1heterogeneous nuclear ribonucleoprotein H1 (H) (213470_s_at), score: 0.49 HNRNPUheterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) (200593_s_at), score: 0.42 HRASLSHRAS-like suppressor (219983_at), score: 0.51 HSP90AB1heat shock protein 90kDa alpha (cytosolic), class B member 1 (214359_s_at), score: 0.45 HSPA1Aheat shock 70kDa protein 1A (200800_s_at), score: 0.42 HSPA4heat shock 70kDa protein 4 (211016_x_at), score: 0.4 HSPA4Lheat shock 70kDa protein 4-like (205543_at), score: 0.52 HSPB2heat shock 27kDa protein 2 (205824_at), score: -0.41 HSPB6heat shock protein, alpha-crystallin-related, B6 (214767_s_at), score: -0.36 HSPB7heat shock 27kDa protein family, member 7 (cardiovascular) (218934_s_at), score: -0.53 HSPG2heparan sulfate proteoglycan 2 (201655_s_at), score: -0.4 IFI16interferon, gamma-inducible protein 16 (208965_s_at), score: 0.44 IFI44interferon-induced protein 44 (214453_s_at), score: 0.43 IFIT3interferon-induced protein with tetratricopeptide repeats 3 (204747_at), score: 0.5 IGF2BP3insulin-like growth factor 2 mRNA binding protein 3 (203819_s_at), score: 0.43 IGFBP3insulin-like growth factor binding protein 3 (212143_s_at), score: -0.48 IKIK cytokine, down-regulator of HLA II (200066_at), score: 0.44 IKZF5IKAROS family zinc finger 5 (Pegasus) (220086_at), score: 0.41 IL11RAinterleukin 11 receptor, alpha (204773_at), score: -0.39 INHBAinhibin, beta A (210511_s_at), score: -0.31 IPO8importin 8 (205701_at), score: 0.44 IQWD1IQ motif and WD repeats 1 (217908_s_at), score: -0.33 IRS2insulin receptor substrate 2 (209185_s_at), score: -0.59 IRX5iroquois homeobox 5 (210239_at), score: -0.36 ISG20L2interferon stimulated exonuclease gene 20kDa-like 2 (208114_s_at), score: 0.41 ISLRimmunoglobulin superfamily containing leucine-rich repeat (207191_s_at), score: -0.39 ITGBL1integrin, beta-like 1 (with EGF-like repeat domains) (214927_at), score: -0.38 KCNS3potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3 (205968_at), score: -0.41 KIAA0495KIAA0495 (213340_s_at), score: -0.45 KIAA0802KIAA0802 (213358_at), score: -0.33 KIAA0895KIAA0895 (213424_at), score: 0.43 KIAA1598KIAA1598 (221802_s_at), score: 0.39 KIF13Bkinesin family member 13B (202962_at), score: 0.4 KIF3Akinesin family member 3A (213623_at), score: 0.44 KIFC1kinesin family member C1 (209680_s_at), score: 0.47 KRT14keratin 14 (209351_at), score: -0.32 KRT19keratin 19 (201650_at), score: -0.33 KRT34keratin 34 (206969_at), score: -0.31 L1CAML1 cell adhesion molecule (204584_at), score: 0.55 LAMB3laminin, beta 3 (209270_at), score: 0.49 LAPTM5lysosomal multispanning membrane protein 5 (201721_s_at), score: -0.33 LBHlimb bud and heart development homolog (mouse) (221011_s_at), score: -0.43 LDOC1leucine zipper, down-regulated in cancer 1 (204454_at), score: -0.48 LEF1lymphoid enhancer-binding factor 1 (221558_s_at), score: 0.52 LGMNlegumain (201212_at), score: -0.3 LIPAlipase A, lysosomal acid, cholesterol esterase (201847_at), score: -0.38 LOC151162hypothetical LOC151162 (212098_at), score: -0.35 LOC388796hypothetical LOC388796 (65588_at), score: 0.51 LOC728855hypothetical LOC728855 (222001_x_at), score: 0.57 LOC730092RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene (216908_x_at), score: 0.41 LOC90379hypothetical protein BC002926 (221849_s_at), score: 0.39 LOXlysyl oxidase (213640_s_at), score: -0.32 LRIG2leucine-rich repeats and immunoglobulin-like domains 2 (205953_at), score: 0.45 LRP10low density lipoprotein receptor-related protein 10 (201412_at), score: -0.35 LRP3low density lipoprotein receptor-related protein 3 (204381_at), score: -0.36 LRRC15leucine rich repeat containing 15 (213909_at), score: -0.34 LRRC2leucine rich repeat containing 2 (219949_at), score: -0.48 LRRFIP1leucine rich repeat (in FLII) interacting protein 1 (201861_s_at), score: -0.33 LTBP2latent transforming growth factor beta binding protein 2 (204682_at), score: -0.48 M6PRmannose-6-phosphate receptor (cation dependent) (200900_s_at), score: 0.48 MAD1L1MAD1 mitotic arrest deficient-like 1 (yeast) (204857_at), score: 0.44 MAFv-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian) (209348_s_at), score: 0.4 MAGOHmago-nashi homolog, proliferation-associated (Drosophila) (210092_at), score: 0.48 MAN2A1mannosidase, alpha, class 2A, member 1 (205105_at), score: -0.54 MAN2B2mannosidase, alpha, class 2B, member 2 (214703_s_at), score: -0.33 MAP3K3mitogen-activated protein kinase kinase kinase 3 (203514_at), score: -0.31 MARCH2membrane-associated ring finger (C3HC4) 2 (210075_at), score: -0.36 MARK1MAP/microtubule affinity-regulating kinase 1 (221047_s_at), score: 0.76 MAT2Amethionine adenosyltransferase II, alpha (200769_s_at), score: 0.41 MATN2matrilin 2 (202350_s_at), score: -0.31 MBOAT2membrane bound O-acyltransferase domain containing 2 (213288_at), score: -0.31 MED6mediator complex subunit 6 (207079_s_at), score: 0.51 MFAP5microfibrillar associated protein 5 (213764_s_at), score: -0.56 MFGE8milk fat globule-EGF factor 8 protein (210605_s_at), score: -0.31 MFHAS1malignant fibrous histiocytoma amplified sequence 1 (213457_at), score: 0.4 MGEA5meningioma expressed antigen 5 (hyaluronidase) (200898_s_at), score: 0.4 MITFmicrophthalmia-associated transcription factor (207233_s_at), score: 0.57 MMP12matrix metallopeptidase 12 (macrophage elastase) (204580_at), score: -0.33 MOXD1monooxygenase, DBH-like 1 (209708_at), score: -0.41 MRC2mannose receptor, C type 2 (37408_at), score: -0.38 MRFAP1L1Morf4 family associated protein 1-like 1 (212199_at), score: 0.47 MRTO4mRNA turnover 4 homolog (S. cerevisiae) (220688_s_at), score: 0.39 MSCmusculin (activated B-cell factor-1) (209928_s_at), score: 0.48 MT1Mmetallothionein 1M (217546_at), score: -0.34 MT1P3metallothionein 1 pseudogene 3 (221953_s_at), score: -0.42 MTUS1mitochondrial tumor suppressor 1 (212096_s_at), score: 0.4 MXRA5matrix-remodelling associated 5 (209596_at), score: -0.35 MXRA8matrix-remodelling associated 8 (213422_s_at), score: -0.41 MYO10myosin X (201976_s_at), score: -0.33 MYO1Cmyosin IC (214656_x_at), score: -0.57 MYO1Dmyosin ID (212338_at), score: -0.34 NAAAN-acylethanolamine acid amidase (214765_s_at), score: -0.35 NAPGN-ethylmaleimide-sensitive factor attachment protein, gamma (210048_at), score: 0.46 NBASneuroblastoma amplified sequence (202926_at), score: -0.33 NCALDneurocalcin delta (211685_s_at), score: -0.32 NCK2NCK adaptor protein 2 (203315_at), score: 0.44 NCR2natural cytotoxicity triggering receptor 2 (217045_x_at), score: -0.39 NCRNA00084non-protein coding RNA 84 (214657_s_at), score: 0.5 NDEL1nudE nuclear distribution gene E homolog (A. nidulans)-like 1 (208093_s_at), score: -0.31 NDNnecdin homolog (mouse) (209550_at), score: -0.35 NDRG3NDRG family member 3 (217286_s_at), score: -0.33 NEDD4Lneural precursor cell expressed, developmentally down-regulated 4-like (212445_s_at), score: 0.43 NEFLneurofilament, light polypeptide (221805_at), score: 0.71 NEK7NIMA (never in mitosis gene a)-related kinase 7 (212530_at), score: -0.36 NFASCneurofascin homolog (chicken) (213438_at), score: -0.42 NGDNneuroguidin, EIF4E binding protein (213794_s_at), score: 0.52 NMUneuromedin U (206023_at), score: 0.56 NOC2Lnucleolar complex associated 2 homolog (S. cerevisiae) (202115_s_at), score: 0.51 NOL12nucleolar protein 12 (219324_at), score: 0.53 NOLC1nucleolar and coiled-body phosphoprotein 1 (205895_s_at), score: 0.41 NONOnon-POU domain containing, octamer-binding (208698_s_at), score: 0.53 NPDC1neural proliferation, differentiation and control, 1 (218086_at), score: -0.32 NR2F6nuclear receptor subfamily 2, group F, member 6 (209262_s_at), score: -0.34 NRGNneurogranin (protein kinase C substrate, RC3) (204081_at), score: 0.63 NTF3neurotrophin 3 (206706_at), score: -0.36 OAS32'-5'-oligoadenylate synthetase 3, 100kDa (218400_at), score: 0.41 OASL2'-5'-oligoadenylate synthetase-like (210797_s_at), score: 0.94 ODF2outer dense fiber of sperm tails 2 (210415_s_at), score: 0.42 ODZ4odz, odd Oz/ten-m homolog 4 (Drosophila) (213273_at), score: -0.31 OPCMLopioid binding protein/cell adhesion molecule-like (214111_at), score: -0.31 P4HA1prolyl 4-hydroxylase, alpha polypeptide I (207543_s_at), score: -0.34 PACS1phosphofurin acidic cluster sorting protein 1 (220557_s_at), score: -0.32 PARP12poly (ADP-ribose) polymerase family, member 12 (218543_s_at), score: 0.4 PAX9paired box 9 (207059_at), score: 0.44 PBLDphenazine biosynthesis-like protein domain containing (219543_at), score: -0.33 PBX1pre-B-cell leukemia homeobox 1 (212148_at), score: -0.39 PCLOpiccolo (presynaptic cytomatrix protein) (213558_at), score: 0.5 PDAP1PDGFA associated protein 1 (202290_at), score: 0.41 PDE10Aphosphodiesterase 10A (205501_at), score: 0.55 PDGFCplatelet derived growth factor C (218718_at), score: -0.42 PDPK13-phosphoinositide dependent protein kinase-1 (204524_at), score: -0.4 PDZRN3PDZ domain containing ring finger 3 (212915_at), score: -0.31 PGCPplasma glutamate carboxypeptidase (203501_at), score: -0.31 PHF11PHD finger protein 11 (221816_s_at), score: -0.38 PILRBpaired immunoglobin-like type 2 receptor beta (220954_s_at), score: 0.59 PIRpirin (iron-binding nuclear protein) (207469_s_at), score: 0.4 PLAUplasminogen activator, urokinase (211668_s_at), score: 0.39 PNMA2paraneoplastic antigen MA2 (209598_at), score: 0.47 PODXLpodocalyxin-like (201578_at), score: -0.49 POLR2Bpolymerase (RNA) II (DNA directed) polypeptide B, 140kDa (201803_at), score: 0.4 POLR3Gpolymerase (RNA) III (DNA directed) polypeptide G (32kD) (206653_at), score: 0.42 PORP450 (cytochrome) oxidoreductase (208928_at), score: 0.46 PPCDCphosphopantothenoylcysteine decarboxylase (219066_at), score: 0.44 PPICpeptidylprolyl isomerase C (cyclophilin C) (204518_s_at), score: -0.32 PPM2Cprotein phosphatase 2C, magnesium-dependent, catalytic subunit (218273_s_at), score: 0.46 PPP1R3Cprotein phosphatase 1, regulatory (inhibitor) subunit 3C (204284_at), score: -0.39 PPP1R8protein phosphatase 1, regulatory (inhibitor) subunit 8 (207830_s_at), score: 0.39 PPP3CBprotein phosphatase 3 (formerly 2B), catalytic subunit, beta isoform (209817_at), score: -0.33 PQBP1polyglutamine binding protein 1 (214527_s_at), score: 0.5 PRKAR2Bprotein kinase, cAMP-dependent, regulatory, type II, beta (203680_at), score: 0.4 PRKCHprotein kinase C, eta (218764_at), score: 0.46 PROS1protein S (alpha) (207808_s_at), score: -0.32 PSG2pregnancy specific beta-1-glycoprotein 2 (208134_x_at), score: -0.34 PSG9pregnancy specific beta-1-glycoprotein 9 (209594_x_at), score: -0.33 PSMB8proteasome (prosome, macropain) subunit, beta type, 8 (large multifunctional peptidase 7) (209040_s_at), score: 0.48 PSMC3proteasome (prosome, macropain) 26S subunit, ATPase, 3 (201267_s_at), score: 0.4 PTGER3prostaglandin E receptor 3 (subtype EP3) (213933_at), score: -0.49 PTHLHparathyroid hormone-like hormone (211756_at), score: -0.32 PTNpleiotrophin (209466_x_at), score: 0.4 PXDNperoxidasin homolog (Drosophila) (212013_at), score: -0.36 QPCTglutaminyl-peptide cyclotransferase (205174_s_at), score: -0.49 R3HCC1R3H domain and coiled-coil containing 1 (212866_at), score: 0.5 RAB7L1RAB7, member RAS oncogene family-like 1 (218700_s_at), score: 0.47 RABGAP1LRAB GTPase activating protein 1-like (213982_s_at), score: -0.5 RABGEF1RAB guanine nucleotide exchange factor (GEF) 1 (218310_at), score: -0.31 RARRES3retinoic acid receptor responder (tazarotene induced) 3 (204070_at), score: 0.45 RBM12RNA binding motif protein 12 (212168_at), score: 0.43 RECKreversion-inducing-cysteine-rich protein with kazal motifs (205407_at), score: -0.43 REEP1receptor accessory protein 1 (204364_s_at), score: 0.52 RFNGRFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase (212968_at), score: -0.32 RGNregucalcin (senescence marker protein-30) (210751_s_at), score: -0.36 RGP1RGP1 retrograde golgi transport homolog (S. cerevisiae) (203169_at), score: 0.47 RHODras homolog gene family, member D (31846_at), score: -0.32 RHOQras homolog gene family, member Q (212119_at), score: -0.35 ROBLD3roadblock domain containing 3 (218291_at), score: -0.31 RP6-213H19.1serine/threonine protein kinase MST4 (218499_at), score: 0.59 RPP14ribonuclease P/MRP 14kDa subunit (204245_s_at), score: 0.45 RTN1reticulon 1 (203485_at), score: 0.44 SAFB2scaffold attachment factor B2 (32099_at), score: 0.46 SAMD4Asterile alpha motif domain containing 4A (212845_at), score: -0.42 SART3squamous cell carcinoma antigen recognized by T cells 3 (209127_s_at), score: 0.46 SC65synaptonemal complex protein SC65 (204078_at), score: -0.39 SCG5secretogranin V (7B2 protein) (203889_at), score: -0.38 SERPINB7serpin peptidase inhibitor, clade B (ovalbumin), member 7 (206421_s_at), score: -0.42 SERPINE2serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 (212190_at), score: -0.36 SERPINF1serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1 (202283_at), score: -0.36 SF4splicing factor 4 (215004_s_at), score: 0.46 SFPQsplicing factor proline/glutamine-rich (polypyrimidine tract binding protein associated) (201585_s_at), score: 0.4 SFRS12IP1SFRS12-interacting protein 1 (217608_at), score: 0.39 SGCDsarcoglycan, delta (35kDa dystrophin-associated glycoprotein) (213543_at), score: -0.43 SGSM2small G protein signaling modulator 2 (36129_at), score: -0.34 SH3YL1SH3 domain containing, Ysc84-like 1 (S. cerevisiae) (204019_s_at), score: -0.32 SHFM1split hand/foot malformation (ectrodactyly) type 1 (202276_at), score: 0.41 SIDT2SID1 transmembrane family, member 2 (56256_at), score: -0.45 SLC12A8solute carrier family 12 (potassium/chloride transporters), member 8 (219874_at), score: 0.42 SLC16A1solute carrier family 16, member 1 (monocarboxylic acid transporter 1) (209900_s_at), score: -0.37 SLC1A1solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 (213664_at), score: -0.37 SLC2A10solute carrier family 2 (facilitated glucose transporter), member 10 (221024_s_at), score: -0.36 SLC30A1solute carrier family 30 (zinc transporter), member 1 (212907_at), score: -0.34 SLC35A3solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3 (206770_s_at), score: -0.36 SLC4A4solute carrier family 4, sodium bicarbonate cotransporter, member 4 (203908_at), score: -0.48 SLC7A1solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 (212295_s_at), score: -0.33 SLC7A11solute carrier family 7, (cationic amino acid transporter, y+ system) member 11 (217678_at), score: 0.53 SMEK1SMEK homolog 1, suppressor of mek1 (Dictyostelium) (220368_s_at), score: 0.55 SMG1SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans) (210057_at), score: 0.48 SMPD1sphingomyelin phosphodiesterase 1, acid lysosomal (209420_s_at), score: -0.4 SNAPC1small nuclear RNA activating complex, polypeptide 1, 43kDa (205443_at), score: 0.54 SNCAsynuclein, alpha (non A4 component of amyloid precursor) (204466_s_at), score: 0.68 SPARCsecreted protein, acidic, cysteine-rich (osteonectin) (212667_at), score: -0.54 SS18synovial sarcoma translocation, chromosome 18 (216684_s_at), score: 0.4 SSNA1Sjogren syndrome nuclear autoantigen 1 (210378_s_at), score: 0.45 SSR3signal sequence receptor, gamma (translocon-associated protein gamma) (217790_s_at), score: -0.42 SSRP1structure specific recognition protein 1 (200956_s_at), score: 0.43 STSsteroid sulfatase (microsomal), isozyme S (203767_s_at), score: -0.35 STX1Asyntaxin 1A (brain) (204729_s_at), score: 0.46 STX2syntaxin 2 (213434_at), score: -0.3 STX8syntaxin 8 (204690_at), score: -0.31 SUPT16Hsuppressor of Ty 16 homolog (S. cerevisiae) (217815_at), score: 0.45 SYTL2synaptotagmin-like 2 (220613_s_at), score: 0.5 TAC1tachykinin, precursor 1 (206552_s_at), score: 0.43 TACSTD2tumor-associated calcium signal transducer 2 (202286_s_at), score: -0.31 TBC1D3TBC1 domain family, member 3 (209403_at), score: 0.44 TBC1D4TBC1 domain family, member 4 (203386_at), score: -0.34 TBC1D8TBC1 domain family, member 8 (with GRAM domain) (204526_s_at), score: 0.53 TBPL1TBP-like 1 (208398_s_at), score: 0.41 TCEAL2transcription elongation factor A (SII)-like 2 (211276_at), score: 0.75 TEKTEK tyrosine kinase, endothelial (206702_at), score: -0.5 TERF1telomeric repeat binding factor (NIMA-interacting) 1 (203448_s_at), score: 0.53 TESK1testis-specific kinase 1 (204106_at), score: -0.37 TGIF1TGFB-induced factor homeobox 1 (203313_s_at), score: 0.39 THSD7Athrombospondin, type I, domain containing 7A (214920_at), score: 0.4 TIMP2TIMP metallopeptidase inhibitor 2 (203167_at), score: -0.54 TK2thymidine kinase 2, mitochondrial (204276_at), score: -0.32 TKTtransketolase (208699_x_at), score: 0.45 TMEM176Btransmembrane protein 176B (220532_s_at), score: 0.42 TMEM204transmembrane protein 204 (219315_s_at), score: -0.44 TMEM47transmembrane protein 47 (209656_s_at), score: -0.54 TMEM51transmembrane protein 51 (218815_s_at), score: 0.42 TMEM8transmembrane protein 8 (five membrane-spanning domains) (221882_s_at), score: -0.35 TMOD1tropomodulin 1 (203661_s_at), score: 0.59 TNFSF12tumor necrosis factor (ligand) superfamily, member 12 (205611_at), score: -0.31 TNS1tensin 1 (221748_s_at), score: -0.49 TOB1transducer of ERBB2, 1 (202704_at), score: -0.46 TOE1target of EGR1, member 1 (nuclear) (204080_at), score: 0.41 TOMM40translocase of outer mitochondrial membrane 40 homolog (yeast) (202264_s_at), score: 0.43 TPD52tumor protein D52 (201690_s_at), score: 0.43 TPST2tyrosylprotein sulfotransferase 2 (204079_at), score: -0.34 TRIM16tripartite motif-containing 16 (204341_at), score: 0.48 TRIM8tripartite motif-containing 8 (221012_s_at), score: -0.42 TRPC4transient receptor potential cation channel, subfamily C, member 4 (220817_at), score: -0.32 TSNtranslin (201504_s_at), score: 0.41 TSPAN13tetraspanin 13 (217979_at), score: -0.48 TSPYL1TSPY-like 1 (221493_at), score: -0.35 TSPYL5TSPY-like 5 (213122_at), score: -0.38 TUBG2tubulin, gamma 2 (203894_at), score: -0.38 TXNRD1thioredoxin reductase 1 (201266_at), score: 0.49 TXNRD2thioredoxin reductase 2 (211177_s_at), score: 0.4 TYRP1tyrosinase-related protein 1 (205694_at), score: 0.49 UAP1UDP-N-acteylglucosamine pyrophosphorylase 1 (209340_at), score: -0.47 UBE2D4ubiquitin-conjugating enzyme E2D 4 (putative) (218837_s_at), score: -0.35 UBL3ubiquitin-like 3 (201535_at), score: -0.57 UCHL1ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase) (201387_s_at), score: -0.36 UGT1A1UDP glucuronosyltransferase 1 family, polypeptide A1 (207126_x_at), score: 0.84 UGT1A6UDP glucuronosyltransferase 1 family, polypeptide A6 (206094_x_at), score: 0.84 UGT1A8UDP glucuronosyltransferase 1 family, polypeptide A8 (221304_at), score: 0.4 UGT1A9UDP glucuronosyltransferase 1 family, polypeptide A9 (204532_x_at), score: 0.82 UROSuroporphyrinogen III synthase (203031_s_at), score: -0.4 USP18ubiquitin specific peptidase 18 (219211_at), score: 0.55 USP25ubiquitin specific peptidase 25 (220419_s_at), score: -0.39 UXS1UDP-glucuronate decarboxylase 1 (219675_s_at), score: -0.37 VAMP4vesicle-associated membrane protein 4 (211760_s_at), score: -0.31 VEGFCvascular endothelial growth factor C (209946_at), score: -0.31 VKORC1vitamin K epoxide reductase complex, subunit 1 (217949_s_at), score: -0.38 VWA5Avon Willebrand factor A domain containing 5A (210102_at), score: 0.56 WDR48WD repeat domain 48 (222157_s_at), score: 0.47 WDR74WD repeat domain 74 (221712_s_at), score: 0.47 WDR91WD repeat domain 91 (218971_s_at), score: 0.42 WNT5Bwingless-type MMTV integration site family, member 5B (221029_s_at), score: -0.39 WT1Wilms tumor 1 (206067_s_at), score: 0.62 YIPF2Yip1 domain family, member 2 (65086_at), score: -0.32 YPEL5yippee-like 5 (Drosophila) (217783_s_at), score: -0.32 ZMAT3zinc finger, matrin type 3 (219628_at), score: -0.32 ZNF227zinc finger protein 227 (217403_s_at), score: 0.48 ZNF281zinc finger protein 281 (218401_s_at), score: -0.35 ZNF415zinc finger protein 415 (205514_at), score: -0.45 ZNF804Azinc finger protein 804A (215767_at), score: 0.52
| Id | sample | Experiment | ExpName | Array | Syndrome | Cell.line |
|---|---|---|---|---|---|---|
| E-GEOD-3407-raw-cel-1437949938.cel | 8 | 4 | Cockayne | hgu133a | none | CSB |
| E-GEOD-3407-raw-cel-1437949579.cel | 2 | 4 | Cockayne | hgu133a | none | CSB |
| E-GEOD-3407-raw-cel-1437949721.cel | 5 | 4 | Cockayne | hgu133a | CS | CSB |
| E-GEOD-3407-raw-cel-1437949750.cel | 6 | 4 | Cockayne | hgu133a | CS | CSB |
