Previous module | Next module Module #13, TG: 3, TC: 2.8, 17 probes, 17 Entrez genes, 5 conditions

Help | Hide | Top Expression data


Expression data for module #13

color bar
Under-expression is coded with green, over-expression with red color.

Help | Hide | Top The GO tree — Biological processes

color bar

immune system process

Any process involved in the development or functioning of the immune system, an organismal system for calibrated responses to potential internal or invasive threats.

immune response

Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat.

biological_process

Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.

response to stimulus

A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus.

all

NA

immune response

Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat.

Help | Hide | Top The GO tree — Cellular Components

color bar

Help | Hide | Top The GO tree — Molecular Function

color bar

protein binding

Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

molecular_function

Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions.

signal transducer activity

Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell.

receptor activity

Combining with an extracellular or intracellular messenger to initiate a change in cell activity.

transmembrane receptor activity

Combining with an extracellular or intracellular messenger to initiate a change in cell activity, and spanning to the membrane of either the cell or an organelle.

cytokine receptor activity

Combining with a cytokine to initiate a change in cell activity.

binding

The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.

cytokine binding

Interacting selectively and non-covalently with a cytokine, any of a group of proteins that function to control the survival, growth and differentiation of tissues and cells, and which have autocrine and paracrine activity.

molecular transducer activity

The molecular function that accepts an input of one form and creates an output of a different form.

all

NA

cytokine receptor activity

Combining with a cytokine to initiate a change in cell activity.

Help | Show | Top GO BP test for over-representation

Help | Show | Top GO CC test for over-representation

Help | Show | Top GO MF test for over-representation

Help | Hide | Top KEGG Pathway test for over-representation

Id Pvalue ExpCount Count Size Term
04640 1.157e-02 0.1261 3
19 Hematopoietic cell lineage
04060 4.355e-02 0.5241 4
79 Cytokine-cytokine receptor interaction

Help | Hide | Top miRNA test for over-representation

No enriched terms

Help | Hide | Top Chromosome test for over-representation

No enriched terms

Help | Hide | Top Genes

Entrez genes

C8Bcomplement component 8, beta polypeptide (ENSG00000021852), score: 0.75 CLDN14claudin 14 (ENSG00000159261), score: 0.78 CSF3Rcolony stimulating factor 3 receptor (granulocyte) (ENSG00000119535), score: 0.74 DHODHdihydroorotate dehydrogenase (ENSG00000102967), score: 0.82 FAM83Afamily with sequence similarity 83, member A (ENSG00000147689), score: 0.97 FGGfibrinogen gamma chain (ENSG00000171557), score: 0.75 FSTfollistatin (ENSG00000134363), score: 0.97 GPR97G protein-coupled receptor 97 (ENSG00000182885), score: 0.8 IGFBP1insulin-like growth factor binding protein 1 (ENSG00000146678), score: 1 IL18RAPinterleukin 18 receptor accessory protein (ENSG00000115607), score: 0.94 IL1R2interleukin 1 receptor, type II (ENSG00000115590), score: 0.84 IL7Rinterleukin 7 receptor (ENSG00000168685), score: 0.84 IRF4interferon regulatory factor 4 (ENSG00000137265), score: 0.77 ITKIL2-inducible T-cell kinase (ENSG00000113263), score: 0.75 S1PR4sphingosine-1-phosphate receptor 4 (ENSG00000125910), score: 0.76 SAMSN1SAM domain, SH3 domain and nuclear localization signals 1 (ENSG00000155307), score: 0.78 TM4SF4transmembrane 4 L six family member 4 (ENSG00000169903), score: 0.75

Non-Entrez genes

Unknown, score:

Help | Hide | Top Conditions

Id species tissue sex individual
mml_lv_f_ca1 mml lv f _
ggo_lv_f_ca1 ggo lv f _
ppa_lv_f_ca1 ppa lv f _
ggo_lv_m_ca1 ggo lv m _
ppy_lv_f_ca1 ppy lv f _

Valid XHTML 1.1 Valid CSS! Best viewed with Firefox

© 2008-2010 Computational Biology Group, Department of Medical Genetics, University of Lausanne, Switzerland