Under-expression is coded with green,
over-expression with red color.
reproduction
The production by an organism of new individuals that contain some portion of their genetic material inherited from that organism.
M phase
A cell cycle process comprising the steps by which a cell progresses through M phase, the part of the cell cycle comprising nuclear division.
metabolic process
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
reproductive developmental process
A developmental process by which a progressive change in the state of some part of an organism specifically contributes to its ability to form offspring.
nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
Any cellular metabolic process involving nucleobases, nucleosides, nucleotides and nucleic acids.
DNA metabolic process
Any cellular metabolic process involving deoxyribonucleic acid. This is one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides.
DNA recombination
Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction.
nitrogen compound metabolic process
The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds; includes nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium.
microtubule-based process
Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins.
cell cycle
The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division.
meiosis
A cell cycle process comprising the steps by which a cell progresses through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations.
meiosis I
A cell cycle process comprising the steps by which a cell progresses through the first phase of meiosis, in which cells divide and homologous chromosomes are paired and segregated from each other, producing two daughter cells.
reciprocal meiotic recombination
The cell cycle process whereby double strand breaks are formed and repaired through a double Holliday junction intermediate. This results in the equal exchange of genetic material between non-sister chromatids in a pair of homologous chromosomes. These reciprocal recombinant products ensure the proper segregation of homologous chromosomes during meiosis I and create genetic diversity.
gamete generation
The generation and maintenance of gametes in a multicellular organism. A gamete is a haploid reproductive cell.
germ cell development
The process whose specific outcome is the progression of an immature germ cell over time, from its formation to the mature structure (gamete). A germ cell is any reproductive cell in a multicellular organism.
spermatogenesis
The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis.
biological_process
Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
cellular process
Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level.
sexual reproduction
The regular alternation, in the life cycle of haplontic, diplontic and diplohaplontic organisms, of meiosis and fertilization which provides for the production offspring. In diplontic organisms there is a life cycle in which the products of meiosis behave directly as gametes, fusing to form a zygote from which the diploid, or sexually reproductive polyploid, adult organism will develop. In diplohaplontic organisms a haploid phase (gametophyte) exists in the life cycle between meiosis and fertilization (e.g. higher plants, many algae and Fungi); the products of meiosis are spores that develop as haploid individuals from which haploid gametes develop to form a diploid zygote; diplohaplontic organisms show an alternation of haploid and diploid generations. In haplontic organisms meiosis occurs in the zygote, giving rise to four haploid cells (e.g. many algae and protozoa), only the zygote is diploid and this may form a resistant spore, tiding organisms over hard times.
cell cycle process
A cellular process that is involved in the progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events.
cell cycle phase
A cell cycle process comprising the steps by which a cell progresses through one of the biochemical and morphological phases and events that occur during successive cell replication or nuclear replication events.
reproductive process
A biological process that directly contributes to the process of producing new individuals by one or two organisms. The new individuals inherit some proportion of their genetic material from the parent or parents.
cell differentiation
The process whereby relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history. Differentiation includes the processes involved in commitment of a cell to a specific fate and its subsequent development to the mature state.
multicellular organismal process
Any biological process, occurring at the level of a multicellular organism, pertinent to its function.
developmental process
A biological process whose specific outcome is the progression of an integrated living unit: an anatomical structure (which may be a subcellular structure, cell, tissue, or organ), or organism over time from an initial condition to a later condition.
multicellular organism reproduction
The biological process by which new individuals are produced by one or two multicellular organisms. The new individuals inherit some proportion of their genetic material from the parent or parents.
cellular nitrogen compound metabolic process
The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds, as carried out by individual cells.
macromolecule metabolic process
The chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass.
cellular metabolic process
The chemical reactions and pathways by which individual cells transform chemical substances.
primary metabolic process
The chemical reactions and pathways involving those compounds which are formed as a part of the normal anabolic and catabolic processes. These processes take place in most, if not all, cells of the organism.
cellular macromolecule metabolic process
The chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass, as carried out by individual cells.
male gamete generation
Generation of the male gamete; specialised haploid cells produced by meiosis and along with a female gamete takes part in sexual reproduction.
cell development
The process whose specific outcome is the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate.
reproductive process in a multicellular organism
The process, occurring above the cellular level, that is pertinent to the reproductive function of a multicellular organism. This includes the integrated processes at the level of tissues and organs.
reproductive cellular process
A process, occurring at the cellular level, that is involved in the reproductive function of a multicellular or single-celled organism.
anatomical structure development
The biological process whose specific outcome is the progression of an anatomical structure from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure, whatever form that may be including its natural destruction. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome.
cellular developmental process
A biological process whose specific outcome is the progression of a cell over time from an initial condition to a later condition.
meiotic cell cycle
Progression through the phases of the meiotic cell cycle, in which canonically a cell replicates to produce four offspring with half the chromosomal content of the progenitor cell.
M phase of meiotic cell cycle
A cell cycle process comprising the steps by which a cell progresses through M phase, the part of the meiotic cell cycle during which meiosis takes place.
nucleic acid metabolic process
Any cellular metabolic process involving nucleic acids.
all
NA
reproductive process
A biological process that directly contributes to the process of producing new individuals by one or two organisms. The new individuals inherit some proportion of their genetic material from the parent or parents.
cellular metabolic process
The chemical reactions and pathways by which individual cells transform chemical substances.
reproductive cellular process
A process, occurring at the cellular level, that is involved in the reproductive function of a multicellular or single-celled organism.
multicellular organism reproduction
The biological process by which new individuals are produced by one or two multicellular organisms. The new individuals inherit some proportion of their genetic material from the parent or parents.
reproductive process in a multicellular organism
The process, occurring above the cellular level, that is pertinent to the reproductive function of a multicellular organism. This includes the integrated processes at the level of tissues and organs.
reproductive developmental process
A developmental process by which a progressive change in the state of some part of an organism specifically contributes to its ability to form offspring.
cellular developmental process
A biological process whose specific outcome is the progression of a cell over time from an initial condition to a later condition.
reproductive process in a multicellular organism
The process, occurring above the cellular level, that is pertinent to the reproductive function of a multicellular organism. This includes the integrated processes at the level of tissues and organs.
cellular nitrogen compound metabolic process
The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds, as carried out by individual cells.
cellular macromolecule metabolic process
The chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass, as carried out by individual cells.
cell cycle process
A cellular process that is involved in the progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events.
germ cell development
The process whose specific outcome is the progression of an immature germ cell over time, from its formation to the mature structure (gamete). A germ cell is any reproductive cell in a multicellular organism.
gamete generation
The generation and maintenance of gametes in a multicellular organism. A gamete is a haploid reproductive cell.
cell development
The process whose specific outcome is the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate.
germ cell development
The process whose specific outcome is the progression of an immature germ cell over time, from its formation to the mature structure (gamete). A germ cell is any reproductive cell in a multicellular organism.
nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
Any cellular metabolic process involving nucleobases, nucleosides, nucleotides and nucleic acids.
cell development
The process whose specific outcome is the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate.
germ cell development
The process whose specific outcome is the progression of an immature germ cell over time, from its formation to the mature structure (gamete). A germ cell is any reproductive cell in a multicellular organism.
DNA metabolic process
Any cellular metabolic process involving deoxyribonucleic acid. This is one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides.
meiosis
A cell cycle process comprising the steps by which a cell progresses through the nuclear division phase of a meiotic cell cycle, the specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiotic division occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations.
M phase of meiotic cell cycle
A cell cycle process comprising the steps by which a cell progresses through M phase, the part of the meiotic cell cycle during which meiosis takes place.
meiosis I
A cell cycle process comprising the steps by which a cell progresses through the first phase of meiosis, in which cells divide and homologous chromosomes are paired and segregated from each other, producing two daughter cells.
reciprocal meiotic recombination
The cell cycle process whereby double strand breaks are formed and repaired through a double Holliday junction intermediate. This results in the equal exchange of genetic material between non-sister chromatids in a pair of homologous chromosomes. These reciprocal recombinant products ensure the proper segregation of homologous chromosomes during meiosis I and create genetic diversity.
reciprocal meiotic recombination
The cell cycle process whereby double strand breaks are formed and repaired through a double Holliday junction intermediate. This results in the equal exchange of genetic material between non-sister chromatids in a pair of homologous chromosomes. These reciprocal recombinant products ensure the proper segregation of homologous chromosomes during meiosis I and create genetic diversity.
intracellular
The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
cellular_component
The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together.
cell
The basic structural and functional unit of all organisms. Includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope.
cytoplasm
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
P granule
A small cytoplasmic, non-membranous RNA/protein complex aggregates in the primordial germ cells of many higher eukaryotes.
organelle
Organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, and prokaryotic structures such as anammoxosomes and pirellulosomes. Excludes the plasma membrane.
non-membrane-bounded organelle
Organized structure of distinctive morphology and function, not bounded by a lipid bilayer membrane. Includes ribosomes, the cytoskeleton and chromosomes.
intracellular organelle
Organized structure of distinctive morphology and function, occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane.
intracellular non-membrane-bounded organelle
Organized structure of distinctive morphology and function, not bounded by a lipid bilayer membrane and occurring within the cell. Includes ribosomes, the cytoskeleton and chromosomes.
intracellular part
Any constituent part of the living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
cytoplasmic part
Any constituent part of the cytoplasm, all of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
cell part
Any constituent part of a cell, the basic structural and functional unit of all organisms.
pole plasm
Differentiated cytoplasm associated with a pole (animal, vegetal, anterior, or posterior) of an oocyte, egg or early embryo.
germ plasm
Differentiated cytoplasm associated with a pole of an oocyte, egg or early embryo that will be inherited by the cells that will give rise to the germ line.
pi-body
A P granule that contains the PIWIL2-TDRD1 module, a set of proteins that act in the primary piRNA pathway. The pi-body corresponds to the cementing material between mitochondria found in gonocytes.
all
NA
cell part
Any constituent part of a cell, the basic structural and functional unit of all organisms.
intracellular non-membrane-bounded organelle
Organized structure of distinctive morphology and function, not bounded by a lipid bilayer membrane and occurring within the cell. Includes ribosomes, the cytoskeleton and chromosomes.
intracellular part
Any constituent part of the living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
intracellular organelle
Organized structure of distinctive morphology and function, occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane.
cytoplasmic part
Any constituent part of the cytoplasm, all of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
P granule
A small cytoplasmic, non-membranous RNA/protein complex aggregates in the primordial germ cells of many higher eukaryotes.
P granule
A small cytoplasmic, non-membranous RNA/protein complex aggregates in the primordial germ cells of many higher eukaryotes.
molecular_function
Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions.
nucleic acid binding
Interacting selectively and non-covalently with any nucleic acid.
binding
The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
all
NA
ADAD1adenosine deaminase domain containing 1 (testis-specific) (ENSG00000164113), score: 0.77 AGBL3ATP/GTP binding protein-like 3 (ENSG00000146856), score: 0.77 APTXaprataxin (ENSG00000137074), score: 0.9 ASPMasp (abnormal spindle) homolog, microcephaly associated (Drosophila) (ENSG00000066279), score: 0.78 C12orf48chromosome 12 open reading frame 48 (ENSG00000185480), score: 1 C12orf50chromosome 12 open reading frame 50 (ENSG00000165805), score: 0.81 C13orf34chromosome 13 open reading frame 34 (ENSG00000136122), score: 0.87 C14orf166Bchromosome 14 open reading frame 166B (ENSG00000100565), score: 0.8 C15orf26chromosome 15 open reading frame 26 (ENSG00000156206), score: 0.77 C1orf174chromosome 1 open reading frame 174 (ENSG00000198912), score: 0.92 C1orf9chromosome 1 open reading frame 9 (ENSG00000094975), score: 0.9 C3orf38chromosome 3 open reading frame 38 (ENSG00000179021), score: 0.81 C7orf45chromosome 7 open reading frame 45 (ENSG00000165120), score: 0.76 CCDC108coiled-coil domain containing 108 (ENSG00000181378), score: 0.78 CCDC27coiled-coil domain containing 27 (ENSG00000162592), score: 0.81 CCDC37coiled-coil domain containing 37 (ENSG00000163885), score: 0.77 CCDC67coiled-coil domain containing 67 (ENSG00000165325), score: 0.85 CPEB2cytoplasmic polyadenylation element binding protein 2 (ENSG00000137449), score: 0.76 CYP11A1cytochrome P450, family 11, subfamily A, polypeptide 1 (ENSG00000140459), score: 0.8 DDX4DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 (ENSG00000152670), score: 0.79 DNAH8dynein, axonemal, heavy chain 8 (ENSG00000124721), score: 0.82 DNAJC5BDnaJ (Hsp40) homolog, subfamily C, member 5 beta (ENSG00000147570), score: 0.77 EFCAB5EF-hand calcium binding domain 5 (ENSG00000176927), score: 0.8 ENO4enolase family member 4 (ENSG00000188316), score: 0.8 FAM54Afamily with sequence similarity 54, member A (ENSG00000146410), score: 0.79 FANCBFanconi anemia, complementation group B (ENSG00000181544), score: 0.81 GDPD4glycerophosphodiester phosphodiesterase domain containing 4 (ENSG00000178795), score: 0.93 GEMIN5gem (nuclear organelle) associated protein 5 (ENSG00000082516), score: 0.81 GRXCR1glutaredoxin, cysteine rich 1 (ENSG00000215203), score: 0.83 HORMAD2HORMA domain containing 2 (ENSG00000176635), score: 0.78 IQCHIQ motif containing H (ENSG00000103599), score: 0.79 KIF14kinesin family member 14 (ENSG00000118193), score: 0.93 KIF27kinesin family member 27 (ENSG00000165115), score: 0.77 KIF2Bkinesin family member 2B (ENSG00000141200), score: 0.8 KLHL10kelch-like 10 (Drosophila) (ENSG00000161594), score: 0.77 LCORLligand dependent nuclear receptor corepressor-like (ENSG00000178177), score: 0.8 LCTlactase (ENSG00000115850), score: 0.87 LHCGRluteinizing hormone/choriogonadotropin receptor (ENSG00000138039), score: 0.89 LRGUKleucine-rich repeats and guanylate kinase domain containing (ENSG00000155530), score: 0.77 LRRC18leucine rich repeat containing 18 (ENSG00000165383), score: 0.92 LRRC52leucine rich repeat containing 52 (ENSG00000162763), score: 0.82 LRRC67leucine rich repeat containing 67 (ENSG00000178125), score: 0.77 LRRIQ1leucine-rich repeats and IQ motif containing 1 (ENSG00000133640), score: 0.79 LRRIQ4leucine-rich repeats and IQ motif containing 4 (ENSG00000188306), score: 0.88 MTF1metal-regulatory transcription factor 1 (ENSG00000188786), score: 0.77 MTF2metal response element binding transcription factor 2 (ENSG00000143033), score: 0.79 MYBL1v-myb myeloblastosis viral oncogene homolog (avian)-like 1 (ENSG00000185697), score: 0.77 NBR1neighbor of BRCA1 gene 1 (ENSG00000188554), score: 0.76 NR5A1nuclear receptor subfamily 5, group A, member 1 (ENSG00000136931), score: 0.88 PAX5paired box 5 (ENSG00000196092), score: 0.77 PAX9paired box 9 (ENSG00000198807), score: 0.86 PHTF1putative homeodomain transcription factor 1 (ENSG00000116793), score: 0.76 RAD54BRAD54 homolog B (S. cerevisiae) (ENSG00000197275), score: 0.88 RBM46RNA binding motif protein 46 (ENSG00000151962), score: 0.81 RIBC2RIB43A domain with coiled-coils 2 (ENSG00000128408), score: 0.81 RPAP2RNA polymerase II associated protein 2 (ENSG00000122484), score: 0.77 SHCBP1SHC SH2-domain binding protein 1 (ENSG00000171241), score: 0.78 SLC6A14solute carrier family 6 (amino acid transporter), member 14 (ENSG00000087916), score: 0.96 SMC1Bstructural maintenance of chromosomes 1B (ENSG00000077935), score: 0.91 SPATA18spermatogenesis associated 18 homolog (rat) (ENSG00000163071), score: 0.77 SPO11SPO11 meiotic protein covalently bound to DSB homolog (S. cerevisiae) (ENSG00000054796), score: 0.93 STILSCL/TAL1 interrupting locus (ENSG00000123473), score: 0.85 STRA8stimulated by retinoic acid gene 8 homolog (mouse) (ENSG00000146857), score: 0.9 SUFUsuppressor of fused homolog (Drosophila) (ENSG00000107882), score: 0.85 SYCP1synaptonemal complex protein 1 (ENSG00000198765), score: 0.83 TDRD1tudor domain containing 1 (ENSG00000095627), score: 0.87 TDRD5tudor domain containing 5 (ENSG00000162782), score: 0.83 TDRD6tudor domain containing 6 (ENSG00000180113), score: 0.77 TEKT3tektin 3 (ENSG00000125409), score: 0.79 TEX9testis expressed 9 (ENSG00000151575), score: 0.81 TOP2Atopoisomerase (DNA) II alpha 170kDa (ENSG00000131747), score: 0.78 TTKTTK protein kinase (ENSG00000112742), score: 0.77 USP49ubiquitin specific peptidase 49 (ENSG00000164663), score: 0.83 WDR64WD repeat domain 64 (ENSG00000162843), score: 0.96 WDR78WD repeat domain 78 (ENSG00000152763), score: 0.79 ZNF438zinc finger protein 438 (ENSG00000183621), score: 0.87 ZNRF4zinc and ring finger 4 (ENSG00000105428), score: 0.79 ZPBP2zona pellucida binding protein 2 (ENSG00000186075), score: 0.81
| Id | species | tissue | sex | individual |
|---|---|---|---|---|
| oan_ts_m2_ca1 | oan | ts | m | 2 |
| mdo_ts_m1_ca1 | mdo | ts | m | 1 |
| mdo_ts_m2_ca1 | mdo | ts | m | 2 |
| mmu_ts_m1_ca1 | mmu | ts | m | 1 |
| mmu_ts_m2_ca1 | mmu | ts | m | 2 |
| oan_ts_m3_ca1 | oan | ts | m | 3 |
| oan_ts_m1_ca1 | oan | ts | m | 1 |
