Under-expression is coded with green,
over-expression with red color.
microtubule-based process
Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins.
microtubule-based movement
Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins.
biological_process
Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
cellular process
Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level.
all
NA
intracellular
The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
axonemal dynein complex
A dynein complex found in eukaryotic cilia and flagella; the motor domain heads interact with adjacent microtubules to generate a sliding force which is converted to a bending motion. May contain two or three dynein heavy chains as well as several light chains.
axoneme
The bundle of microtubules and associated proteins that forms the core of cilia and flagella in eukaryotic cells and is responsible for their movements.
cellular_component
The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together.
cell
The basic structural and functional unit of all organisms. Includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope.
cytoskeleton
Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles.
microtubule
Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle.
microtubule associated complex
Any multimeric complex connected to a microtubule.
microtubule cytoskeleton
The part of the cytoskeleton (the internal framework of a cell) composed of microtubules and associated proteins.
dynein complex
Any of several large complexes that contain two or three dynein heavy chains and several light chains, and have microtubule motor activity.
macromolecular complex
A stable assembly of two or more macromolecules, i.e. proteins, nucleic acids, carbohydrates or lipids, in which the constituent parts function together.
cell projection
A prolongation or process extending from a cell, e.g. a flagellum or axon.
organelle
Organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, and prokaryotic structures such as anammoxosomes and pirellulosomes. Excludes the plasma membrane.
membrane-bounded organelle
Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane.
non-membrane-bounded organelle
Organized structure of distinctive morphology and function, not bounded by a lipid bilayer membrane. Includes ribosomes, the cytoskeleton and chromosomes.
intracellular organelle
Organized structure of distinctive morphology and function, occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane.
intracellular membrane-bounded organelle
Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane.
intracellular non-membrane-bounded organelle
Organized structure of distinctive morphology and function, not bounded by a lipid bilayer membrane and occurring within the cell. Includes ribosomes, the cytoskeleton and chromosomes.
protein complex
Any macromolecular complex composed of two or more polypeptide subunits, which may or may not be identical. Protein complexes may have other associated non-protein prosthetic groups, such as nucleotides, metal ions or other small molecules.
organelle part
Any constituent part of an organelle, an organized structure of distinctive morphology and function. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, but excludes the plasma membrane.
intracellular part
Any constituent part of the living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
cytoskeletal part
Any constituent part of the cytoskeleton, a cellular scaffolding or skeleton that maintains cell shape, enables some cell motion (using structures such as flagella and cilia), and plays important roles in both intra-cellular transport (e.g. the movement of vesicles and organelles) and cellular division. Includes constituent parts of intermediate filaments, microfilaments, microtubules, and the microtrabecular lattice.
intracellular organelle part
A constituent part of an intracellular organelle, an organized structure of distinctive morphology and function, occurring within the cell. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton but excludes the plasma membrane.
axoneme part
Any constituent part of an axoneme, the bundle of microtubules and associated proteins that forms the core of cilia and flagella in eukaryotic cells and is responsible for their movements.
cell projection part
Any constituent part of a cell projection, a prolongation or process extending from a cell, e.g. a flagellum or axon.
cell part
Any constituent part of a cell, the basic structural and functional unit of all organisms.
all
NA
cell part
Any constituent part of a cell, the basic structural and functional unit of all organisms.
organelle part
Any constituent part of an organelle, an organized structure of distinctive morphology and function. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, but excludes the plasma membrane.
intracellular membrane-bounded organelle
Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane.
intracellular non-membrane-bounded organelle
Organized structure of distinctive morphology and function, not bounded by a lipid bilayer membrane and occurring within the cell. Includes ribosomes, the cytoskeleton and chromosomes.
intracellular organelle part
A constituent part of an intracellular organelle, an organized structure of distinctive morphology and function, occurring within the cell. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton but excludes the plasma membrane.
axoneme part
Any constituent part of an axoneme, the bundle of microtubules and associated proteins that forms the core of cilia and flagella in eukaryotic cells and is responsible for their movements.
intracellular part
Any constituent part of the living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
cell projection part
Any constituent part of a cell projection, a prolongation or process extending from a cell, e.g. a flagellum or axon.
axoneme
The bundle of microtubules and associated proteins that forms the core of cilia and flagella in eukaryotic cells and is responsible for their movements.
intracellular organelle
Organized structure of distinctive morphology and function, occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane.
intracellular organelle part
A constituent part of an intracellular organelle, an organized structure of distinctive morphology and function, occurring within the cell. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton but excludes the plasma membrane.
axoneme part
Any constituent part of an axoneme, the bundle of microtubules and associated proteins that forms the core of cilia and flagella in eukaryotic cells and is responsible for their movements.
axoneme
The bundle of microtubules and associated proteins that forms the core of cilia and flagella in eukaryotic cells and is responsible for their movements.
axoneme part
Any constituent part of an axoneme, the bundle of microtubules and associated proteins that forms the core of cilia and flagella in eukaryotic cells and is responsible for their movements.
axoneme
The bundle of microtubules and associated proteins that forms the core of cilia and flagella in eukaryotic cells and is responsible for their movements.
microtubule
Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle.
microtubule associated complex
Any multimeric complex connected to a microtubule.
axonemal dynein complex
A dynein complex found in eukaryotic cilia and flagella; the motor domain heads interact with adjacent microtubules to generate a sliding force which is converted to a bending motion. May contain two or three dynein heavy chains as well as several light chains.
cytoskeletal part
Any constituent part of the cytoskeleton, a cellular scaffolding or skeleton that maintains cell shape, enables some cell motion (using structures such as flagella and cilia), and plays important roles in both intra-cellular transport (e.g. the movement of vesicles and organelles) and cellular division. Includes constituent parts of intermediate filaments, microfilaments, microtubules, and the microtrabecular lattice.
microtubule
Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle.
microtubule associated complex
Any multimeric complex connected to a microtubule.
molecular_function
Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions.
motor activity
Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate.
microtubule motor activity
Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP).
catalytic activity
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
nucleoside-triphosphatase activity
Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate.
pyrophosphatase activity
Catalysis of the hydrolysis of a pyrophosphate bond between two phosphate groups, leaving one phosphate on each of the two fragments.
hydrolase activity
Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
hydrolase activity, acting on acid anhydrides
Catalysis of the hydrolysis of any acid anhydride.
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
Catalysis of the hydrolysis of any acid anhydride which contains phosphorus.
all
NA
ADAD1adenosine deaminase domain containing 1 (testis-specific) (ENSG00000164113), score: 0.83 AGBL3ATP/GTP binding protein-like 3 (ENSG00000146856), score: 0.84 AK7adenylate kinase 7 (ENSG00000140057), score: 0.86 ANKRD5ankyrin repeat domain 5 (ENSG00000132623), score: 0.85 BOLLbol, boule-like (Drosophila) (ENSG00000152430), score: 0.84 C12orf63chromosome 12 open reading frame 63 (ENSG00000188596), score: 0.86 C14orf166Bchromosome 14 open reading frame 166B (ENSG00000100565), score: 0.86 C15orf26chromosome 15 open reading frame 26 (ENSG00000156206), score: 0.88 C19orf45chromosome 19 open reading frame 45 (ENSG00000198723), score: 0.91 C1orf158chromosome 1 open reading frame 158 (ENSG00000157330), score: 0.83 C20orf85chromosome 20 open reading frame 85 (ENSG00000124237), score: 0.86 C7orf45chromosome 7 open reading frame 45 (ENSG00000165120), score: 0.9 C7orf62chromosome 7 open reading frame 62 (ENSG00000164645), score: 0.84 CCDC108coiled-coil domain containing 108 (ENSG00000181378), score: 0.84 CCDC63coiled-coil domain containing 63 (ENSG00000173093), score: 0.92 CCDC67coiled-coil domain containing 67 (ENSG00000165325), score: 0.84 CCDC83coiled-coil domain containing 83 (ENSG00000150676), score: 0.9 CNOT4CCR4-NOT transcription complex, subunit 4 (ENSG00000080802), score: 0.84 DNAH8dynein, axonemal, heavy chain 8 (ENSG00000124721), score: 0.94 DNAI2dynein, axonemal, intermediate chain 2 (ENSG00000171595), score: 0.87 DYDC1DPY30 domain containing 1 (ENSG00000170788), score: 0.88 EFCAB5EF-hand calcium binding domain 5 (ENSG00000176927), score: 0.83 FAM194Afamily with sequence similarity 194, member A (ENSG00000163645), score: 0.84 FBXO43F-box protein 43 (ENSG00000156509), score: 0.85 GMPSguanine monphosphate synthetase (ENSG00000163655), score: 0.86 GSG1germ cell associated 1 (ENSG00000111305), score: 0.85 HIAT1hippocampus abundant transcript 1 (ENSG00000156875), score: 0.83 IQCHIQ motif containing H (ENSG00000103599), score: 0.86 KIAA0586KIAA0586 (ENSG00000100578), score: 0.86 KIF18Akinesin family member 18A (ENSG00000121621), score: 0.94 KIF18Bkinesin family member 18B (ENSG00000186185), score: 0.85 KIF2Bkinesin family member 2B (ENSG00000141200), score: 0.84 KLHL10kelch-like 10 (Drosophila) (ENSG00000161594), score: 0.85 LASS3LAG1 homolog, ceramide synthase 3 (ENSG00000154227), score: 0.98 LRRC43leucine rich repeat containing 43 (ENSG00000158113), score: 0.84 LRRC67leucine rich repeat containing 67 (ENSG00000178125), score: 0.9 LRRIQ4leucine-rich repeats and IQ motif containing 4 (ENSG00000188306), score: 0.85 NEK2NIMA (never in mitosis gene a)-related kinase 2 (ENSG00000117650), score: 0.88 NMBRneuromedin B receptor (ENSG00000135577), score: 0.86 RAG2recombination activating gene 2 (ENSG00000175097), score: 0.92 RNF17ring finger protein 17 (ENSG00000132972), score: 0.9 SHCBP1SHC SH2-domain binding protein 1 (ENSG00000171241), score: 0.84 SPACA1sperm acrosome associated 1 (ENSG00000118434), score: 0.87 TEKT3tektin 3 (ENSG00000125409), score: 0.83 ZNRF4zinc and ring finger 4 (ENSG00000105428), score: 0.87 ZPBPzona pellucida binding protein (ENSG00000042813), score: 0.85
Id | species | tissue | sex | individual |
---|---|---|---|---|
ppa_ts_m_ca1 | ppa | ts | m | _ |
ptr_ts_m_ca1 | ptr | ts | m | _ |
gga_ts_m1_ca1 | gga | ts | m | 1 |
gga_ts_m2_ca1 | gga | ts | m | 2 |
mml_ts_m1_ca1 | mml | ts | m | 1 |
mml_ts_m2_ca1 | mml | ts | m | 2 |
mmu_ts_m1_ca1 | mmu | ts | m | 1 |
mmu_ts_m2_ca1 | mmu | ts | m | 2 |