Previous module | Next module Module #58, TG: 3, TC: 2, 21 probes, 20 Entrez genes, 4 conditions

Help | Hide | Top Expression data


Expression data for module #58

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Under-expression is coded with green, over-expression with red color.

Help | Hide | Top The GO tree — Biological processes

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Help | Hide | Top The GO tree — Cellular Components

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intracellular

The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.

cellular_component

The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together.

cell

The basic structural and functional unit of all organisms. Includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope.

nucleus

A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.

organelle

Organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, and prokaryotic structures such as anammoxosomes and pirellulosomes. Excludes the plasma membrane.

membrane-bounded organelle

Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane.

intracellular organelle

Organized structure of distinctive morphology and function, occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane.

intracellular membrane-bounded organelle

Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane.

intracellular part

Any constituent part of the living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.

cell part

Any constituent part of a cell, the basic structural and functional unit of all organisms.

all

NA

cell part

Any constituent part of a cell, the basic structural and functional unit of all organisms.

intracellular membrane-bounded organelle

Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane.

intracellular part

Any constituent part of the living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.

intracellular organelle

Organized structure of distinctive morphology and function, occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane.

Help | Hide | Top The GO tree — Molecular Function

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molecular_function

Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions.

nucleic acid binding

Interacting selectively and non-covalently with any nucleic acid.

DNA binding

Any molecular function by which a gene product interacts selectively with DNA (deoxyribonucleic acid).

binding

The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.

all

NA

Help | Show | Top GO BP test for over-representation

Help | Show | Top GO CC test for over-representation

Help | Show | Top GO MF test for over-representation

Help | Hide | Top KEGG Pathway test for over-representation

No enriched terms

Help | Hide | Top miRNA test for over-representation

No enriched terms

Help | Hide | Top Chromosome test for over-representation

No enriched terms

Help | Hide | Top Genes

Entrez genes

ACER1alkaline ceramidase 1 (ENSG00000167769), score: 0.86 AIREautoimmune regulator (ENSG00000160224), score: 0.81 APTXaprataxin (ENSG00000137074), score: 0.86 CRYBA1crystallin, beta A1 (ENSG00000108255), score: 0.82 CXorf22chromosome X open reading frame 22 (ENSG00000165164), score: 1 CXorf30chromosome X open reading frame 30 (ENSG00000205081), score: 0.81 E2F8E2F transcription factor 8 (ENSG00000129173), score: 0.93 ENO4enolase family member 4 (ENSG00000188316), score: 0.77 FOXN1forkhead box N1 (ENSG00000109101), score: 0.83 KIF18Bkinesin family member 18B (ENSG00000186185), score: 0.87 KIF24kinesin family member 24 (ENSG00000186638), score: 0.85 MYBv-myb myeloblastosis viral oncogene homolog (avian) (ENSG00000118513), score: 0.87 MYF5myogenic factor 5 (ENSG00000111049), score: 0.91 NUP54nucleoporin 54kDa (ENSG00000138750), score: 0.77 ORC1Lorigin recognition complex, subunit 1-like (S. cerevisiae) (ENSG00000085840), score: 0.78 PUS3pseudouridylate synthase 3 (ENSG00000110060), score: 0.86 RFX6regulatory factor X, 6 (ENSG00000185002), score: 0.87 TERTtelomerase reverse transcriptase (ENSG00000164362), score: 0.8 TLX1T-cell leukemia homeobox 1 (ENSG00000107807), score: 0.82 UHRF1ubiquitin-like with PHD and ring finger domains 1 (ENSG00000034063), score: 0.79

Non-Entrez genes

ENSG00000205081Unknown, score: 0.84

Help | Hide | Top Conditions

Id species tissue sex individual
gga_ts_m2_ca1 gga ts m 2
mdo_ts_m1_ca1 mdo ts m 1
mdo_ts_m2_ca1 mdo ts m 2
gga_ts_m1_ca1 gga ts m 1

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