Previous module | Next module Module #79, TG: 2.6, TC: 1.8, 85 probes, 83 Entrez genes, 6 conditions

Help | Hide | Top Expression data


Expression data for module #79

color bar
Under-expression is coded with green, over-expression with red color.

Help | Hide | Top The GO tree — Biological processes

color bar

system process

A multicellular organismal process carried out by any of the organs or tissues in an organ system. An organ system is a regularly interacting or interdependent group of organs or tissues that work together to carry out a biological objective.

neurological system process

A organ system process carried out by any of the organs or tissues of neurological system.

sensory perception

The series of events required for an organism to receive a sensory stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process.

visual perception

The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image.

biological_process

Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.

cellular component organization

A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a cellular component.

multicellular organismal process

Any biological process, occurring at the level of a multicellular organism, pertinent to its function.

cellular component maintenance

The organization process by which a cellular component is preserved in a stable functional or structural state.

photoreceptor cell maintenance

Any process preventing the degeneration of the photoreceptor, a specialized cell type that is sensitive to light.

sensory perception of light stimulus

The series of events required for an organism to receive a sensory light stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process.

all

NA

photoreceptor cell maintenance

Any process preventing the degeneration of the photoreceptor, a specialized cell type that is sensitive to light.

Help | Hide | Top The GO tree — Cellular Components

color bar

membrane

Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.

cellular_component

The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together.

cell

The basic structural and functional unit of all organisms. Includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope.

intrinsic to membrane

Located in a membrane such that some covalently attached portion of the gene product, for example part of a peptide sequence or some other covalently attached moiety such as a GPI anchor, spans or is embedded in one or both leaflets of the membrane.

membrane part

Any constituent part of a membrane, a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.

cell part

Any constituent part of a cell, the basic structural and functional unit of all organisms.

all

NA

cell part

Any constituent part of a cell, the basic structural and functional unit of all organisms.

membrane part

Any constituent part of a membrane, a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.

Help | Hide | Top The GO tree — Molecular Function

color bar

molecular_function

Elemental activities, such as catalysis or binding, describing the actions of a gene product at the molecular level. A given gene product may exhibit one or more molecular functions.

signal transducer activity

Mediates the transfer of a signal from the outside to the inside of a cell by means other than the introduction of the signal molecule itself into the cell.

receptor activity

Combining with an extracellular or intracellular messenger to initiate a change in cell activity.

molecular transducer activity

The molecular function that accepts an input of one form and creates an output of a different form.

all

NA

Help | Show | Top GO BP test for over-representation

Help | Show | Top GO CC test for over-representation

Help | Show | Top GO MF test for over-representation

Help | Hide | Top KEGG Pathway test for over-representation

No enriched terms

Help | Hide | Top miRNA test for over-representation

No enriched terms

Help | Hide | Top Chromosome test for over-representation

No enriched terms

Help | Hide | Top Genes

Entrez genes

ARHGAP36Rho GTPase activating protein 36 (ENSG00000147256), score: 0.64 ATP10BATPase, class V, type 10B (ENSG00000118322), score: 0.63 C11orf9chromosome 11 open reading frame 9 (ENSG00000124920), score: 0.65 C1orf198chromosome 1 open reading frame 198 (ENSG00000119280), score: 0.65 C3orf16chromosome 3 open reading frame 16 (ENSG00000206199), score: 0.71 CALHM1calcium homeostasis modulator 1 (ENSG00000185933), score: 0.75 CCT8chaperonin containing TCP1, subunit 8 (theta) (ENSG00000156261), score: -0.67 CD22CD22 molecule (ENSG00000012124), score: 0.87 CDC26cell division cycle 26 homolog (S. cerevisiae) (ENSG00000176386), score: -0.68 CDHR1cadherin-related family member 1 (ENSG00000148600), score: 0.73 CERCAMcerebral endothelial cell adhesion molecule (ENSG00000167123), score: 0.88 CHADLchondroadherin-like (ENSG00000100399), score: 0.72 CLCA4chloride channel accessory 4 (ENSG00000016602), score: 0.82 CLDND1claudin domain containing 1 (ENSG00000080822), score: 0.71 CLN8ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation) (ENSG00000182372), score: 0.74 CLUL1clusterin-like 1 (retinal) (ENSG00000079101), score: 0.93 CNGB1cyclic nucleotide gated channel beta 1 (ENSG00000070729), score: 0.7 CNP2',3'-cyclic nucleotide 3' phosphodiesterase (ENSG00000173786), score: 0.72 COL10A1collagen, type X, alpha 1 (ENSG00000123500), score: 0.86 CRYBB1crystallin, beta B1 (ENSG00000100122), score: 0.79 DEFB134defensin, beta 134 (ENSG00000205882), score: 0.85 DNMBPdynamin binding protein (ENSG00000107554), score: -0.64 DOHHdeoxyhypusine hydroxylase/monooxygenase (ENSG00000129932), score: 0.65 DSELdermatan sulfate epimerase-like (ENSG00000171451), score: 0.63 ENPP2ectonucleotide pyrophosphatase/phosphodiesterase 2 (ENSG00000136960), score: 0.63 EVI2Aecotropic viral integration site 2A (ENSG00000126860), score: 0.69 FA2Hfatty acid 2-hydroxylase (ENSG00000103089), score: 0.63 FABP6fatty acid binding protein 6, ileal (ENSG00000170231), score: 0.83 FAM103A1family with sequence similarity 103, member A1 (ENSG00000169612), score: -0.63 FAM108B1family with sequence similarity 108, member B1 (ENSG00000107362), score: 0.63 FAM124Afamily with sequence similarity 124A (ENSG00000150510), score: 0.8 FAM125Bfamily with sequence similarity 125, member B (ENSG00000196814), score: 0.64 FOXRED2FAD-dependent oxidoreductase domain containing 2 (ENSG00000100350), score: 0.63 GABRQgamma-aminobutyric acid (GABA) receptor, theta (ENSG00000147402), score: 0.69 GALNT6UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 6 (GalNAc-T6) (ENSG00000139629), score: 0.81 GPR123G protein-coupled receptor 123 (ENSG00000197177), score: 0.67 GPR151G protein-coupled receptor 151 (ENSG00000173250), score: 0.63 GPR78G protein-coupled receptor 78 (ENSG00000155269), score: 0.67 GREM1gremlin 1 (ENSG00000166923), score: 0.87 GTF2E2general transcription factor IIE, polypeptide 2, beta 34kDa (ENSG00000197265), score: -0.64 GUK1guanylate kinase 1 (ENSG00000143774), score: 0.62 HHIPL1HHIP-like 1 (ENSG00000182218), score: 0.72 IL1RAPL1interleukin 1 receptor accessory protein-like 1 (ENSG00000169306), score: 0.7 KCNH8potassium voltage-gated channel, subfamily H (eag-related), member 8 (ENSG00000183960), score: 0.7 KREMEN2kringle containing transmembrane protein 2 (ENSG00000131650), score: 0.99 LGR5leucine-rich repeat-containing G protein-coupled receptor 5 (ENSG00000139292), score: 0.74 LHPPphospholysine phosphohistidine inorganic pyrophosphate phosphatase (ENSG00000107902), score: 0.64 LIX1Lix1 homolog (chicken) (ENSG00000145721), score: 0.94 LRIT2leucine-rich repeat, immunoglobulin-like and transmembrane domains 2 (ENSG00000204033), score: 1 LYPD5LY6/PLAUR domain containing 5 (ENSG00000159871), score: 0.67 MARCH1membrane-associated ring finger (C3HC4) 1 (ENSG00000145416), score: 0.65 MARCKSL1MARCKS-like 1 (ENSG00000175130), score: 0.68 NIPAL4NIPA-like domain containing 4 (ENSG00000172548), score: 0.79 NPC1Niemann-Pick disease, type C1 (ENSG00000141458), score: 0.82 NT5DC35'-nucleotidase domain containing 3 (ENSG00000111696), score: 0.63 PAX7paired box 7 (ENSG00000009709), score: 0.81 PIK3CDphosphoinositide-3-kinase, catalytic, delta polypeptide (ENSG00000171608), score: 0.74 PIP4K2Aphosphatidylinositol-5-phosphate 4-kinase, type II, alpha (ENSG00000150867), score: 0.69 PREX1phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1 (ENSG00000124126), score: 0.68 PRKCQprotein kinase C, theta (ENSG00000065675), score: 0.69 PRPH2peripherin 2 (retinal degeneration, slow) (ENSG00000112619), score: 0.74 PRR18proline rich 18 (ENSG00000176381), score: 0.79 PRRG1proline rich Gla (G-carboxyglutamic acid) 1 (ENSG00000130962), score: 0.74 PTK2PTK2 protein tyrosine kinase 2 (ENSG00000169398), score: 0.69 PTPRHprotein tyrosine phosphatase, receptor type, H (ENSG00000080031), score: 0.73 RAB4BRAB4B, member RAS oncogene family (ENSG00000167578), score: 0.69 RAPGEF5Rap guanine nucleotide exchange factor (GEF) 5 (ENSG00000136237), score: 0.63 RASAL1RAS protein activator like 1 (GAP1 like) (ENSG00000111344), score: 0.63 ROM1retinal outer segment membrane protein 1 (ENSG00000149489), score: 0.65 RS1retinoschisin 1 (ENSG00000102104), score: 0.95 SETD6SET domain containing 6 (ENSG00000103037), score: -0.66 SH3GLB2SH3-domain GRB2-like endophilin B2 (ENSG00000148341), score: 0.63 SH3TC2SH3 domain and tetratricopeptide repeats 2 (ENSG00000169247), score: 0.68 SIRT2sirtuin 2 (ENSG00000068903), score: 0.64 SLCO1A2solute carrier organic anion transporter family, member 1A2 (ENSG00000084453), score: 0.63 SRPRBsignal recognition particle receptor, B subunit (ENSG00000144867), score: 0.71 SYT15synaptotagmin XV (ENSG00000204176), score: 0.81 TAC3tachykinin 3 (ENSG00000166863), score: 0.62 TMEM144transmembrane protein 144 (ENSG00000164124), score: 0.78 TNFRSF13Ctumor necrosis factor receptor superfamily, member 13C (ENSG00000159958), score: 0.64 UNC5Cunc-5 homolog C (C. elegans) (ENSG00000182168), score: 0.74 UTS2urotensin 2 (ENSG00000049247), score: 0.65 ZSWIM6zinc finger, SWIM-type containing 6 (ENSG00000130449), score: 0.64

Non-Entrez genes

ENSG00000107902Unknown, score: -0.64 ENSG00000129932Unknown, score: 0.68

Help | Hide | Top Conditions

Id species tissue sex individual
hsa_br_m1_ca1 hsa br m 1
hsa_br_m2_ca1 hsa br m 2
hsa_br_f_ca1 hsa br f _
hsa_br_m7_ca1 hsa br m 7
hsa_br_m3_ca1 hsa br m 3
hsa_br_m6_ca1 hsa br m 6

Valid XHTML 1.1 Valid CSS! Best viewed with Firefox

© 2008-2010 Computational Biology Group, Department of Medical Genetics, University of Lausanne, Switzerland