ISA

Large sets of data, like expression profile from many samples, require analytic tools to reduce their complexity. The Iterative Signature Algorithm (ISA) was designed to reduce the complexity of very large sets of data by decomposing it into so-called "modules". In the context of gene expression data these modules consist of subsets of genes that exhibit a coherent expression profile only over a subset of microarray experiments. Genes and arrays may be attributed to multiple modules and the level of required coherence can be varied resulting in different "resolutions" of the modular mapping. Since the ISA does not rely on the computation of correlation matrices (like many other tools), it is extremely fast even for very large datasets.

Software for Gene expression data

We developed the eisa GNU R package to facilitate the modular analysis of gene expression data. The package uses standard BioConductor data structures and includes various visualization tools as well.

Requirements, download and installation

To use eisa you will need a working GNU R installation.

As of the 23rd of April, 2010, the eisa package is an official BioConductor package.

eisa depends on a number of other R packages: isa2, Biobase, AnnotationDbi, Category, genefilter, DBI. The good news is that all these dependencies are installed automatically, and all you need to do is to start R and type in

 source("http://bioconductor.org/biocLite.R")
 biocLite("eisa")

at your R prompt. See the eisa package page at the BioConductor website for details.

Alternatively, you can also download the package from here:

• Microsoft Windows (32 bit)
  Download this file, save it in a temporary directory, and then start R. From the Packages menu choose 'Install packages from local zip files' and select the saved file.
• Microsoft Windows (64 bit)
  Download this file, save it in a temporary directory, and then start R. From the Packages menu choose 'Install packages from local zip files' and select the saved file.
• Mac OSX (Leopard)
  Download and install this file.
• Linux and Unix systems, R source package
  Download this file, save it in a temporary directory, and start R. Install the downloaded package using the install.packages() function: give the full path of the saved file and use the 'repos=NULL' argument of install.packages().

License

The eisa package is licensed under the GNU General Public License, version 2 or later. For details, see http://www.gnu.org/licenses/old-licenses/gpl-2.0.html.

Software for any tabular data

The ISA can be applied to identify coherent substructures (i.e. modules) from any rectangular matrix of data. You can use the isa2 R package for such an analysis.

Requirements

No additional R package is required to install and use isa2. But on Linux and Unix systems you will need a C compiler to install it. E.g. on Ubuntu Linux you will need to install the build-essential package.

Installation

The isa2 package is available from CRAN, the standard R package repository. You can install it on any platform that is supported by GNU R, e.g. Microsoft Windows, Mac OSX and Linux systems. To install it, start R and type in

 install.packages("isa2")

at the prompt. On Linux and Unix-like systems, you will need a working C compiler for a successful installation.

License

The isa2 package is licensed under the Creative Commons Attribution-Noncommercial-Share Alike 3.0 License. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-sa/3.0/ or send a letter to Creative Commons, 171 Second Street, Suite 300, San Francisco, California, 94105, USA.

Tutorials

The Iterative Signature Algorithm for Gene Expression Data

Shows the typical steps of modular analysis, from loading you expression data to the visualization of transcription modules.
HTML PDF Rnw R code

ISA and the biclust package

The biclust package implements several biclustering algorithms. It is possible to convert the results of biclust to transcription modules and vice-versa.
HTML PDF Rnw R code

Tissue specific expression with the Iterative Signature Algorithm

HTML PDF Rnw R code

Hierarchical module trees

A module tree is the hierarchical modular organization of a data set.
HTML PDF Rnw R code

The Iterative Signature Algorithm

Tutorial for the analysis of tabular data with the isa2 R package.
HTML PDF Rnw R code

Running ISA in parallel

Shows how to run ISA on a computer cluster or multi-processor machine, using MPI and the Rmpi and snow R packages.
HTML PDF Rnw R code

ISA internals

HTML PDF Rnw R code

Matlab package

You can download it from here. It also includes the implementation of the Ping-pong algorithm Kutalik2008NB. The "testPP.m" file explains how the algorithm is applied to a pair of toy data sets. To test the ISA functionalities, the "testISA.m" needs to be launched.

Papers

von der Emde L, Rennen GC, Vaisband M, Hasenauer J, Liegl R, Fleckenstein M, Pfau M, Holz FG, Ach T
Impact of lens autofluorescence and opacification on retinal imaging.
BMJ Open Ophthalmol: 2024 Apr 29, 9(1);
[PubMed:38684375] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Achenbach L, Bloch H, Klein C, Damm T, Obinger M, Rudert M, Krutsch W, Szymski D
Four distinct patterns of anterior cruciate ligament injury in women's professional football (soccer): a systematic video analysis of 37 match injuries.
Br J Sports Med: 2024 Apr 29;
[PubMed:38684328] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Gamble AR, McKay MJ, Anderson DB, Pappas E, Alvarez Cooper I, Macpherson S, Harris IA, Filbay SR, McCaffery K, Thompson R, Hoffmann TC, Maher CG, Zadro JR
Development of a patient decision aid for children and adolescents following anterior cruciate ligament rupture: an international mixed-methods study.
BMJ Open: 2024 Apr 29, 14(4);e081421
[PubMed:38684251] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Gerritsen JKW, Young JS, Chang SM, Krieg SM, Jungk C, van den Bent MJ, Satoer DD, Ille S, Schucht P, Nahed BV, Broekman MLD, Berger M, De Vleeschouwer S, Vincent AJPE
SUPRAMAX-study: supramaximal resection versus maximal resection for glioblastoma patients: study protocol for an international multicentre prospective cohort study (ENCRAM 2201).
BMJ Open: 2024 Apr 29, 14(4);e082274
[PubMed:38684246] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Ebigbo A, Wanzl J, Afify S, Nagl S, Messmann H
Endoscopic suture-based closure of a dehiscent rectal stump.
Endoscopy: 2024 Dec, 56(S 01);E381
[PubMed:38684202] [WorldCat.org: ISSN ESSN ] [DOI] ( o)

De Cristofaro E, Lafeuille P, Rivory J, DʼAlmeida R, Masgnaux LJ, Lupu A, Pioche M
A simple and low impact glove tip to achieve colonic endoscopic submucosal dissection with adaptive traction in patients with stoma.
Endoscopy: 2024 Dec, 56(S 01);E379-E380
[PubMed:38684201] [WorldCat.org: ISSN ESSN ] [DOI] ( o)

Xiong X, Tian Y, Zhao D, Qian S, Ran H, Pan T, Ma Y
Diagnosis and treatment of a rare small intestine duplication in adult under double-balloon enteroscopy and laparoscopy.
Endoscopy: 2024 Dec, 56(S 01);E377-E378
[PubMed:38684200] [WorldCat.org: ISSN ESSN ] [DOI] ( o)

Sawada K, Matsumori T, Nishikawa Y, Maruno T, Shiokawa M, Uza N, Seno H
Removal of a torn biliary stent fragment using a novel tapered-tip sheath system.
Endoscopy: 2024 Dec, 56(S 01);E374-E376
[PubMed:38684199] [WorldCat.org: ISSN ESSN ] [DOI] ( o)

Hamada K, Horikawa Y, Techigawara K, Nagahashi T, Ishikawa M, Honda M, Sugai T
Mucosal flap creation in colorectal endoscopic submucosal dissection using a V-shaped incision.
Endoscopy: 2024 Dec, 56(S 01);E372-E373
[PubMed:38684198] [WorldCat.org: ISSN ESSN ] [DOI] ( o)

Yi Y, Cao TT, Gan T, Wang Z
A modified transparent cap-assisted delivery method for capsule endoscopy.
Endoscopy: 2024 Dec, 56(S 01);E370-E371
[PubMed:38684197] [WorldCat.org: ISSN ESSN ] [DOI] ( o)

Pawlak KM, Teshima C
Resolution of dysphagia following endoscopic resection of a large, nodular, esophageal inlet patch with low grade dysplasia.
Endoscopy: 2024 Dec, 56(S 01);E369
[PubMed:38684196] [WorldCat.org: ISSN ESSN ] [DOI] ( o)

Fukuda S, Hijioka S, Nagashio Y, Maruki Y, Chatto M, Saito Y, Okusaka T
Forward-viewing echoendoscope aids tissue acquisition via the afferent limb after pancreaticoduodenectomy.
Endoscopy: 2024 Dec, 56(S 01);E366-E368
[PubMed:38684195] [WorldCat.org: ISSN ESSN ] [DOI] ( o)

Colijn MA, Crockford DN
18q Deletion Syndrome-Associated Schizophrenia: A Case Report.
Neuropsychobiology: 2024 Apr 29;1-4
[PubMed:38684151] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Song DH, Lee JS, Lee JH, Kim DC, Yang JW, Kim MH, Na JM, Cho HK, Yoo J, An HJ
Exosome-mediated secretion of miR-127-3p regulated by RAB27A accelerates metastasis in renal cell carcinoma.
Cancer Cell Int: 2024 Apr 29, 24(1);153
[PubMed:38685086] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Ming S, Han J, Yao X, Guo X, Guo Q, Lei B
Myopia information on TikTok: analysis factors that impact video quality and audience engagement.
BMC Public Health: 2024 Apr 29, 24(1);1194
[PubMed:38685020] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Harrison S, Alderdice F, Quigley MA
Correction: Impact of sampling and data collection methods on maternity survey response: a randomised controlled trial of paper and push‑to‑web surveys and a concurrent social media survey.
BMC Med Res Methodol: 2024 Apr 29, 24(1);100
[PubMed:38684950] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Sajjadi H, Mansouri N, Nabavi SN, Delouei AA, Atashafrooz M
Sensitivity analysis of natural convection in a porous cavity filled with nanofluid and equipped with horizontal fins using various optimization methods and MRT-LB.
Sci Rep: 2024 Apr 29, 14(1);9847
[PubMed:38684789] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Peprah P, Oduro MS, Atta-Osei G, Addo IY, Morgan AK, Gyasi RM
Problematic social media use mediates the effect of cyberbullying victimisation on psychosomatic complaints in adolescents.
Sci Rep: 2024 Apr 29, 14(1);9773
[PubMed:38684725] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Kim H, Jun T, Lee H, Chae BG, Yoon M, Kim C
Deep-learning based 3D birefringence image generation using 2D multi-view holographic images.
Sci Rep: 2024 Apr 30, 14(1);9879
[PubMed:38684698] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Slowiak JM, McDonough M
Job Burnout, Work Health Management Interference, and Organizational Health Climate Among Employees with Varied Levels of Work Ability.
J Occup Rehabil: 2024 Apr 30;
[PubMed:38684640] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Potolicchio A, Jehaes C, Merlot B, Assenat V, Dennis T, Roman H, Francois MO, Denost Q
Treatment techniques for rectovaginal fistulas after low rectal resection for deep endometriosis.
Tech Coloproctol: 2024 Apr 29, 28(1);51
[PubMed:38684547] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Keyes K, Hamilton A, Finsaas M, Kreski N
Childhood internalizing, externalizing and attention symptoms predict changes in social and nonsocial screen time.
Soc Psychiatry Psychiatr Epidemiol: 2024 Apr 29;
[PubMed:38684513] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Fox M
Physician Assistant Educators' Production Blueprint for Video Pedagogy.
J Physician Assist Educ: 2024 Apr 30;
[PubMed:38684095] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Swistak MSc Z, Sookoo Ma S, Jewell PhD T
Integrating Subjective Recovery and Stigma Resistance in Individuals with Schizophrenia: A Narrative Review and Theoretical Integration.
Issues Ment Health Nurs: 2024 Apr 29;1-14
[PubMed:38684074] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Fekih-Romdhane F, Obeid S, Rogoza R, Gerges S, Hallit S
Moderating Effect of Trait Mindfulness in the Association Between Problematic Social Media Use and Anxiety Among Lebanese University Students.
Prim Care Companion CNS Disord: 2024 Apr 16, 26(2);
[PubMed:38684016] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Yuk J, Pandey A, Park L, Bemis WE, Jung S
Effect of skull morphology on fox snow diving.
Proc Natl Acad Sci U S A: 2024 May 7, 121(19);e2321179121
[PubMed:38683988] [WorldCat.org: ISSN ESSN ] [DOI] ( o)

Senior C, Stewart PA, Bucy E, Lee N
Winners and losers: Emotional shifts across elections are conveyed by a politician's smile.
PLoS One: 2024, 19(4);e0301113
[PubMed:38683807] [WorldCat.org: ISSN ESSN ] [DOI] ( )

Mishra NR, Gutheil WG
Stereoselective Amine-omics Using Heavy Atom Isotope Labeled l- and d-Marfey's Reagents.
J Am Soc Mass Spectrom: 2024 Apr 29;
[PubMed:38683793] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Chaudhary K, Zulfiqar S, ALOthman ZA, Shakir I, Warsi MF, Cochran EW
Three-dimensional bimodal pore-rich G/MXene sponge amalgamated with vanadium diselenide nanosheets as a high-performance electrode for electrochemical water-oxidation/reduction reactions.
Dalton Trans: 2024 Apr 29;
[PubMed:38683625] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Mondo GB, Cathcarth M, Longo GS, Picco AS, Cardoso MB
Short Zwitterionic Sulfobetaine-Modified Silica Nanoparticles: Is Neutrality Possible?
Langmuir: 2024 Apr 29;
[PubMed:38683600] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Criado-Gonzalez M, Peñas MI, Barbault F, Müller AJ, Boulmedais F, Hernández R
Salt-induced Fmoc-tripeptide supramolecular hydrogels: a combined experimental and computational study of the self-assembly.
Nanoscale: 2024 Apr 29;
[PubMed:38683577] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Torre AC, Bastard DP, Diehl M, Rosa-Diez G, Volonteri V, Mazzuoccolo LD, Belatti AL
[Calciphylaxis, risk factors, treatment and outcomes. Retrospective study of 39 patients].
Medicina (B Aires): 2024, 84(2);196-205
[PubMed:38683504] [WorldCat.org: ISSN ESSN ] ( p)

Zhang Y, He W, Shi X, Chen M, Bao C, Ji Y
Effects of earthworms on antibiotic resistance genes in different soil-plant systems.
Environ Sci Pollut Res Int: 2024 Apr 29;
[PubMed:38683428] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Reis EP, Blankemeier L, Zambrano Chaves JM, Jensen MEK, Yao S, Truyts CAM, Willis MH, Adams S, Amaro E Jr, Boutin RD, Chaudhari AS
Automated abdominal CT contrast phase detection using an interpretable and open-source artificial intelligence algorithm.
Eur Radiol: 2024 Apr 29;
[PubMed:38683384] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Zheng K, Qian J, Jiang N, Zhou J, Wang L, Zhang F
Unexpected discovery of renal mass in a patient with granulomatosis with polyangiitis: accidental or inevitable?
Clin Exp Rheumatol: 2024 Apr, 42(4);905-913
[PubMed:38683205] [WorldCat.org: ISSN ESSN ] [DOI] ( o)

Michel L, Durand P, Chevalier A
A Naphthalimide based "Turn-ON" probe for wash-free imaging of lipid-droplet in living cells with an excellent selectivity.
Chembiochem: 2024 Apr 29;e202400270
[PubMed:38683177] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Denijs E, Unal K, Bevernaege K, Kasmi S, De Geest BG, Winne JM
Thermally Triggered Triazolinedione-Tyrosine Bioconjugation with Improved Chemo- and Site-Selectivity.
J Am Chem Soc: 2024 Apr 29;
[PubMed:38683141] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Kharkwal A, Clayton RB, Park J, Ridgway JL, Merle P
Are Instagram Gym Advertisements Working Out? An Experimental Study of Model Body-Size and Slogan-Type.
Health Commun: 2024 Apr 29;1-12
[PubMed:38683111] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Tarango-García A, Lugo-Reyes SO, Alvarez-Cardona A
[Feeling analysis on allergen immunotherapy on Twitter using an unsupervised machine learning model].
Rev Alerg Mex: 2024 Feb 1, 71(1);8-11
[PubMed:38683063] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Ali E, Červenková L, Pálek R, Ambrozkiewicz F, Pavlov S, Ye W, Hošek P, Daum O, Liška V, Hemminki K, Trailin A
Mast Cells in the Microenvironment of Hepatocellular Carcinoma Confer Favorable Prognosis: A Retrospective Study using QuPath Image Analysis Software.
J Vis Exp: 2024 Apr 12, (206);
[PubMed:38682951] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Krishnia L, Kashyap MK
Development of Compendium for Esophageal Squamous Cell Carcinoma.
J Vis Exp: 2024 Apr 12, (206);
[PubMed:38682946] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Gaizo Moore VD, Haenel G, Judge A
Assessment of Mitochondrial Oxygen Consumption Using a Plate Reader-based Fluorescent Assay.
J Vis Exp: 2024 Apr 12, (206);
[PubMed:38682942] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Merighi F, De Vincentiis S, Onorati M, Raffa V
Long-Term Mouse Spinal Cord Organotypic Slice Culture as a Platform for Validating Cell Transplantation in Spinal Cord Injury.
J Vis Exp: 2024 Apr 12, (206);
[PubMed:38682940] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Polikarpova A, Bucher C, Ellinghaus A, Okulski H, Duda G, Schmidt-Bleek K, Tanaka EM
Stabilizing a Femur Osteotomy with a Plate Fixation in Ambystoma mexicanum.
J Vis Exp: 2024 Apr 12, (206);
[PubMed:38682939] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Gulsever CI, Öztürk M, Sahin D, Koksoy F, Ornek V, Aydoseli A, Sencer A
Full-Endoscopic Surgery for Hypothalamic Hamartoma Resection.
J Vis Exp: 2024 Apr 12, (206);
[PubMed:38682937] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Song H, Jia J, Zhao D, Guo M, Wang F, Hou K, Jiang N, Fu Z, Zhou J, Zhang H, Ding Y, Yang Y, Chen C, Jia X, Hou Z, Yang S
Endoscopic Balloon Dilatation of the Eustachian Tube via the Soft Palate Approach in Miniature Pigs.
J Vis Exp: 2024 Apr 12, (206);
[PubMed:38682934] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Jia PP, Liu XR, Wu MF, Li Y, Zhang LC, Pei DS
Generation, Maintenance, and Identification of Germ-Free Zebrafish Models from Larvae to Juvenile Stages.
J Vis Exp: 2024 Apr 12, (206);
[PubMed:38682933] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Eddy RL, Xu GH, Leipsic JA, Leung JM, Sin DD, Hall CS, Tam RC
Multi-modal Pulmonary Imaging: Using Complementary Information from CT and Hyperpolarized 129Xe MRI to Evaluate Lung Structure-Function.
J Vis Exp: 2024 Apr 12, (206);
[PubMed:38682932] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Li J, Liu Y, Li RT, Liu Y, Li F
The Effect of Anti-fatigue Decoction on the Behaviors and Serological Indicators in a Central Fatigue Rat Model.
J Vis Exp: 2024 Apr 12, (206);
[PubMed:38682926] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Coenradij J, Bailoni E, Poolman B
Construction of Out-of-Equilibrium Metabolic Networks in Nano- and Micrometer-Sized Vesicles.
J Vis Exp: 2024 Apr 12, (206);
[PubMed:38682922] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Stoneback L, Fullano GD, White MS, Naaz S, Lepley LK
Development of a Low-cost Epimysial Electromyography Electrode: A Simplified Workflow for Fabrication and Testing.
J Vis Exp: 2024 Apr 12, (206);
[PubMed:38682921] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Zabel WJ, Allam N, Contreras Sanchez HA, Foltz W, Flueraru C, Taylor E, Vitkin A
A Dorsal Skinfold Window Chamber Tumor Mouse Model for Combined Intravital Microscopy and Magnetic Resonance Imaging in Translational Cancer Research.
J Vis Exp: 2024 Apr 12, (206);
[PubMed:38682919] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Gong T, Huang Q, Zhang H, Liu C, Su X, Yang Y, Liu X, Zheng Y, Ye H
Press Needle: A Traditional Chinese Medicine Therapy for Myopia Patients with Dry Eye.
J Vis Exp: 2024 Apr 12, (206);
[PubMed:38682910] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Bai YZ, Yokoyama Y, Li W, Terada Y, Kreisel D, Nava RG
Murine Left Pulmonary Hilar Clamp Model of Lung Ischemia Reperfusion Injury.
J Vis Exp: 2024 Apr 12, (206);
[PubMed:38682909] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Michaelis S, Chen T, Schmid C, Hilbi H
Nitric oxide signaling through three receptors regulates virulence, biofilm formation, and phenotypic heterogeneity of Legionella pneumophila.
mBio: 2024 Apr 29;e0071024
[PubMed:38682908] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Kiraly JK, Harris SC, Al-Khindi T, Dunn FA, Kolodkin AL
PyOKR: A Semi-Automated Method for Quantifying Optokinetic Reflex Tracking Ability.
J Vis Exp: 2024 Apr 12, (206);
[PubMed:38682904] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Morrow CS, Gillette AA, Skala MC, Moore DL
Classification of Neural Stem Cell Activation State In Vitro using Autofluorescence.
J Vis Exp: 2024 Apr 12, (206);
[PubMed:38682901] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Kvalem IL, Dahr Nygaard IM, Træen B, Ivanova A, Dahlgren CL
Menstrual attitudes in adult women: A cross-sectional study on the association with menstruation factors, contraceptive use, genital self-image, and sexual openness.
Womens Health (Lond): 2024 Jan-Dec, 20;17455057241249553
[PubMed:38682834] [WorldCat.org: ISSN ESSN ] [DOI] ( p)

Fayos M, Arnaiz de Las Revillas F, González Quintanilla V, González-Rico C, Fariñas-Álvarez C, Parra JA, Fariñas MC
Progression of subclinical cardiovascular disease in patients with HIV.
Rev Esp Quimioter: 2024 Apr 29;
[PubMed:38682819] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Magis-Weinberg L, Arreola Vargas M, Carrizales A, Trinh CT, Muñoz Lopez DE, Hussong AM, Lansford JE
The impact of COVID-19 on the peer relationships of adolescents around the world: A rapid systematic review.
J Res Adolesc: 2024 Apr 29;
[PubMed:38682766] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Garg J, Kewcharoen J, Contractor T, Mandapati R, Bhardwaj R
Intracardiac Echocardiogram from Persistent Left Superior Vena Cava.
Am J Cardiol: 2024 Jan 1, 210;225-228
[PubMed:38682714] [WorldCat.org: ISSN ESSN ] [DOI] ( o)

Shinjoh M, Togo K, Hayamizu T, Yonemoto N, Morii J, Perdrizet J, Kamei K
Cost-effectiveness analysis of 20-valent pneumococcal conjugate vaccine for routine pediatric vaccination programs in Japan.
Expert Rev Vaccines: 2024 Apr 29;
[PubMed:38682661] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Menzes TDS, Martini MM, Lotto M, Jucá AM, Jorge OS, Cruvinel A, Cruvinel T
Untangling the truth: User engagement with misinformation in toothache-related Facebook posts.
Community Dent Health: 2024 Apr 9;
[PubMed:38682571] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Ghali H, Albers SE
An updated review on the safety of N, N-diethyl-meta-toluamide insect repellent use in children and the efficacy of natural alternatives.
Pediatr Dermatol: 2024 Jan 19;
[PubMed:38682561] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Pool J, Fatehi F, Sharifi S, Namvar M, Akhlaghpour S
Unpacking Sociotechnical Discourses on Telehealth Use and Data Protection: A Path Towards Digital Health Value Creation.
Stud Health Technol Inform: 2024 Apr 26, 313;62-67
[PubMed:38682506] [WorldCat.org: ISSN ESSN ] [DOI] ( p)

Wamsler K, Head LC, Shendruk TN
Lock-key microfluidics: simulating nematic colloid advection along wavy-walled channels.
Soft Matter: 2024 Apr 29;
[PubMed:38682298] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Gray WG, Miller CT
Analysis of 'Investigating an extended multiphase flow model that includes specific interfacial area', Computer Methods in Applied Mechanics and Engineering, 418:116594, 2024.
Comput Methods Appl Mech Eng: 2024 Jun 1, 426;
[PubMed:38682154] [WorldCat.org: ISSN ESSN ] [DOI] ( o)

Yanestria SM, Effendi MH, Tyasningsih W, Moses IB, Khairullah AR, Kurniawan SC, Dameanti FNAEP, Ikaratri R, Pratama JWA, Sigit M, Hasib A, Silaen OSM
Antimicrobial resistance patterns and genes of Campylobacter jejuni isolated from chickens in Pasuruan, Indonesia.
Open Vet J: 2024 Mar, 14(3);759-768
[PubMed:38682147] [WorldCat.org: ISSN ESSN ] [DOI] ( o)

Qosimah D, Laminem L, Setyawati D, Mandasari C
Harnessing black soldier fly (Hermetia illucens) prepupae against Aeromonas hydrophila: Fermentation-based fatty acids production and its bioinformatic assessment.
Open Vet J: 2024 Mar, 14(3);902-912
[PubMed:38682129] [WorldCat.org: ISSN ESSN ] [DOI] ( o)

Taheri H, Feizabadi MM, Keikha R, Afkari R
Therapeutic effects of probiotics and herbal medications on oxalate nephrolithiasis: a mini systematic review.
Iran J Microbiol: 2024 Feb, 16(1);4-18
[PubMed:38682062] [WorldCat.org: ISSN ESSN ] [DOI] ( p)

Logan NJ, Broda KL, Pantelireis N, Williams G, Higgins CA
Chromatin accessibility profiling reveals that human fibroblasts respond to mechanical stimulation in a cell-specific manner.
JBMR Plus: 2024 May, 8(5);ziae025
[PubMed:38682000] [WorldCat.org: ISSN ESSN ] [DOI] ( )

Hebden JC, Forrester G, Zhang H, Pacis DM
Using spectral derivatives to remove the influence of hair on optical images of the static absorbing properties of tissue-like turbid media.
Neurophotonics: 2024 Apr, 11(2);025002
[PubMed:38681965] [WorldCat.org: ISSN ESSN ] [DOI] ( o)

Grzanka M, Joniec A, Rogulski J, Sobiech Ł, Idziak R, Loryś B
Impact of novel herbicide based on synthetic auxins and ALS inhibitor on weed control.
Open Life Sci: 2024, 19(1);20220868
[PubMed:38681726] [WorldCat.org: ISSN ESSN ] [DOI] ( )

Prakash C, Indira M, Deepika B, Naveen M
Anesthetic management in a patient with acute aortic dissection and severe left ventricular systolic dysfunction.
Indian J Thorac Cardiovasc Surg: 2024 May, 40(3);396-397
[PubMed:38681707] [WorldCat.org: ISSN ESSN ] [DOI] ( o)

Almansour MA, Alhussain MN, Alsarhan MN
Awareness of Urgent Care Services Among Primary Healthcare Center Patients in Al-Ahsa, Saudi Arabia.
Cureus: 2024 Mar, 16(3);e57099
[PubMed:38681469] [WorldCat.org: ISSN ESSN ] [DOI] ( )

Mersal FA, Mohamed Abu Negm LM, Fawzy MS, Rajennal AT, Alanazi RS, Alanazi LO
Effect of Mobile Phone Use on Musculoskeletal Complaints: Insights From Nursing Students at Northern Border University, Arar, Saudi Arabia.
Cureus: 2024 Mar, 16(3);e57181
[PubMed:38681440] [WorldCat.org: ISSN ESSN ] [DOI] ( )

Rust BD, Christoforides E, Singh A, Wahba S, Choudhari J, Copper J, Kaspari A, Patel V, Ortiz S, Ojo DE, Sharieff KA
Evaluating the Distribution, Quality, and Educational Value of Videos Related to Knee Instability Exercises on the Social Media Platform TikTok.
Cureus: 2024 Mar, 16(3);e57104
[PubMed:38681428] [WorldCat.org: ISSN ESSN ] [DOI] ( )

Gaur R, Patidar V, Kumar S, Sharma SK, Kalyani VC, Kalal N, Mudgal SK
Utilization of Smartphones and Attitude Regarding Their Use at the Workplace by Nurses: A Cross-Sectional Study.
Cureus: 2024 Mar, 16(3);e57000
[PubMed:38681409] [WorldCat.org: ISSN ESSN ] [DOI] ( )

Okwuraiwe AP, Ogbonne EL, Adeniyi AO, Ihurhe PI, Musa BO, Abe TR, Shodipe OO, Audu RA
Detection of High-Risk Human Papillomavirus Genotypes Among HIV-Infected Women in Four States in Nigeria.
Cureus: 2024 Mar, 16(3);e57120
[PubMed:38681319] [WorldCat.org: ISSN ESSN ] [DOI] ( )

Ferreira LDC, Carvalho ICB, Jorge LAC, Quezado-Duval AM, Rossato M
Hyperspectral imaging for the detection of plant pathogens in seeds: recent developments and challenges.
Front Plant Sci: 2024, 15;1387925
[PubMed:38681215] [WorldCat.org: ISSN ESSN ] [DOI] ( )

Liu J, Wang P, Wang LM, Guo J, Zhong N
Outcomes of endoscopic sclerotherapy for jejunal varices at the site of choledochojejunostomy (with video): Three case reports.
World J Gastroenterol: 2024 Apr 14, 30(14);2059-2067
[PubMed:38681128] [WorldCat.org: ISSN ESSN ] [DOI] ( p)

Liu X, Obacz J, Emanuelli G, Chambers JE, Abreu S, Chen X, Linnane E, Mehta JP, Wheatley AEH, Marciniak SJ, Fairen-Jimenez D
Enhancing Drug Delivery Efficacy Through Bilayer Coating of Zirconium-Based Metal-Organic Frameworks: Sustained Release and Improved Chemical Stability and Cellular Uptake for Cancer Therapy.
Chem Mater: 2024 Apr 23, 36(8);3588-3603
[PubMed:38681089] [WorldCat.org: ISSN ESSN ] [DOI] ( )

Urich TJ, Lee W, Po J, Bookstein A, Barahona R, Baezconde-Garbanati L
From art to health action: lessons from a community-based, culturally tailored arts-meets-health educational campaign in Hispanic communities.
Front Public Health: 2024, 12;1385916
[PubMed:38680937] [WorldCat.org: ISSN ESSN ] [DOI] ( )

García YE, Villa-Pérez ME, Li K, Tai XH, Trejo LA, Daza-Torres ML, Montesinos-López JC, Nuño M
Wildfires and social media discourse: exploring mental health and emotional wellbeing through Twitter.
Front Public Health: 2024, 12;1349609
[PubMed:38680934] [WorldCat.org: ISSN ESSN ] [DOI] ( )

Li H, Zhang W, Yan J
Physical activity and sedentary behavior among school-going adolescents in low- and middle-income countries: insights from the global school-based health survey.
PeerJ: 2024, 12;e17097
[PubMed:38680891] [WorldCat.org: ISSN ESSN ] [DOI] ( )

Yosep I, Suryani S, Mediani HS, Mardhiyah A, Maulana I, Hernawaty T, Hazmi H
A Scoping Review of Assertiveness Therapy for Reducing Bullying Behavior and Its Impacts Among Adolescents.
J Multidiscip Healthc: 2024, 17;1777-1790
[PubMed:38680879] [WorldCat.org: ISSN ESSN ] [DOI] ( )

Ahmadi A, Ghaderian M, Nourmohammadi H, Sabri MR, Dehghan B, Mahdavi C
Comparison of CIMT and FMD in the Brachial Artery between Children with Acyanotic Congenital Heart Disease and Healthy Controls: A Case-Control Study.
J Tehran Heart Cent: 2023 Oct, 18(4);256-260
[PubMed:38680641] [WorldCat.org: ISSN ESSN ] [DOI] ( p)

Zhao Z, Zhu R, Yang Y, Wang H, Wang J, Han G
Optical Analysis Method for Turbid Media Based on Wedge-Shaped Cells at Different Angles.
ACS Omega: 2024 Apr 23, 9(16);18119-18126
[PubMed:38680373] [WorldCat.org: ISSN ESSN ] [DOI] ( )

Alunni Cardinali M, Ceccarini MR, Chiesa I, Bittolo Bon S, Rondini T, Serrano-Ruiz M, Caporali M, Tacchi S, Verdini A, Petrillo C, De Maria C, Beccari T, Sassi P, Valentini L
Mechanical Transfer of Black Phosphorus on a Silk Fibroin Substrate: A Viable Method for Photoresponsive and Printable Biomaterials.
ACS Omega: 2024 Apr 23, 9(16);17977-17988
[PubMed:38680339] [WorldCat.org: ISSN ESSN ] [DOI] ( )

Brown JM, Sofis M, Zimmer S, Kaplan BA
Delay discounting is associated with addiction and mental health measures while controlling for health behaviors and health barriers in a large US sample.
Addict Behav Rep: 2024 Jun, 19;100545
[PubMed:38680208] [WorldCat.org: ISSN ESSN ] [DOI] ( )

Hasbi H, Iskandar H, Sonjaya H, Purwantara B, Arifiantini RI, Agil M, Pardede BP, Suyadi S, Septian WA, Samsudewa D, Damayanti E, Maulana T, Said S
Comparative developmental competence of in vitro embryos recovered from Bali cattle with normal and poor sperm motility.
Vet World: 2024 Mar, 17(3);593-601
[PubMed:38680141] [WorldCat.org: ISSN ESSN ] [DOI] ( o)

Granzotto C, Aksamija A, Tinnevelt GH, Turkina V, Sutherland K
New insight from MALDI-TOF MS and multivariate data analysis on the botanical origin of polysaccharide-based paint binders in ancient Egypt.
Anal Methods: 2024 Apr 29;
[PubMed:38680024] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Chatterjee S, Gawde NC, Gupta PC
Prevalence, Reach of Anti-smokeless Tobacco Messages and Quit Attempts by Product Type: A Secondary Data Analysis from the Global Adult Tobacco Survey (GATS - 2016-17).
Asian Pac J Cancer Prev: 2024 Apr 1, 25(4);1277-1283
[PubMed:38679988] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Hatzifilalithis S, Weldrick R, Harvey K
Key Learnings from 'Seniors of Canada': A Community Project Aimed to Disrupt Ageism.
Can J Aging: 2024 Apr 29;1-7
[PubMed:38679950] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Penning MJ, Browning SD, Haq KS, Kidd B
Framing Later Life Vulnerability during the COVID-19 Pandemic: A Content Analysis of Newspaper Coverage in Canada and the United States.
Can J Aging: 2024 Apr 29;1-11
[PubMed:38679941] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Ali M, Tucker JD, Kpokiri EE, Wu D, Rahman MA, Mia T, Chowdhury MSA, Ahmed F, Hakim HAN, Paiker ZM, Nuha NJ
Crowdsourcing to increase hepatitis B and C testing and reduce hepatitis stigma among medical students in Bangladesh.
J Viral Hepat: 2024 Apr 28;
[PubMed:38679925] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Richartz ER, Hodgkiss BA, Black-Ocken NC, Fuentes RA, Looper JS, Withers SS
Characterization of the dissemination of canine cancer misinformation on YouTube.
Vet Comp Oncol: 2024 Apr 28;
[PubMed:38679924] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Nassar AA, Demyati AK
Understanding Public Awareness and Practices of Nonsurgical Facial Dermal Fillers: A Cross-Sectional Study in Saudi Arabia.
Niger J Clin Pract: 2024 Apr 1, 27(4);528-533
[PubMed:38679777] [WorldCat.org: ISSN ESSN ] [DOI] ( o)

Adekanye AG, Onwughalu BC, Mgbe RB, Umana A, Anisi CO, Somefun AO
Risk Factors for Otitis Media with Effusion in Preschool and School Children in Calabar Municipality.
Niger J Clin Pract: 2024 Apr 1, 27(4);435-441
[PubMed:38679764] [WorldCat.org: ISSN ESSN ] [DOI] ( o)

Kathami N, Moreno-Vicente C, Martín P, Vergara-Arce JA, Ruiz-Hernández R, Gerovska D, Aransay AM, Araúzo-Bravo MJ, Camarero-Espinosa S, Abarrategi A
rhBMP-2 induces terminal differentiation of human bone marrow mesenchymal stromal cells only by synergizing with other signals.
Stem Cell Res Ther: 2024 Apr 29, 15(1);124
[PubMed:38679735] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

<biblio>

1. Kutalik2008NB pmid=18464786 // PDF
2. Ihmels2004 pmid=15606968 // PDF
3. Ihmels2004a pmid=15044247 // PDF
4. Bergmann2004 pmid=14737187 // PDF
5. Bergmann2003 pmid=12689096 //PDF
6. Ihmels2002 pmid=12134151 // PDF

</biblio>