ISA

Large sets of data, like expression profile from many samples, require analytic tools to reduce their complexity. The Iterative Signature Algorithm (ISA) was designed to reduce the complexity of very large sets of data by decomposing it into so-called "modules". In the context of gene expression data these modules consist of subsets of genes that exhibit a coherent expression profile only over a subset of microarray experiments. Genes and arrays may be attributed to multiple modules and the level of required coherence can be varied resulting in different "resolutions" of the modular mapping. Since the ISA does not rely on the computation of correlation matrices (like many other tools), it is extremely fast even for very large datasets.

Software for Gene expression data

We developed the eisa GNU R package to facilitate the modular analysis of gene expression data. The package uses standard BioConductor data structures and includes various visualization tools as well.

Requirements, download and installation

To use eisa you will need a working GNU R installation.

As of the 23rd of April, 2010, the eisa package is an official BioConductor package.

eisa depends on a number of other R packages: isa2, Biobase, AnnotationDbi, Category, genefilter, DBI. The good news is that all these dependencies are installed automatically, and all you need to do is to start R and type in

 source("http://bioconductor.org/biocLite.R")
 biocLite("eisa")

at your R prompt. See the eisa package page at the BioConductor website for details.

Alternatively, you can also download the package from here:

• Microsoft Windows (32 bit)
  Download this file, save it in a temporary directory, and then start R. From the Packages menu choose 'Install packages from local zip files' and select the saved file.
• Microsoft Windows (64 bit)
  Download this file, save it in a temporary directory, and then start R. From the Packages menu choose 'Install packages from local zip files' and select the saved file.
• Mac OSX (Leopard)
  Download and install this file.
• Linux and Unix systems, R source package
  Download this file, save it in a temporary directory, and start R. Install the downloaded package using the install.packages() function: give the full path of the saved file and use the 'repos=NULL' argument of install.packages().

License

The eisa package is licensed under the GNU General Public License, version 2 or later. For details, see http://www.gnu.org/licenses/old-licenses/gpl-2.0.html.

Software for any tabular data

The ISA can be applied to identify coherent substructures (i.e. modules) from any rectangular matrix of data. You can use the isa2 R package for such an analysis.

Requirements

No additional R package is required to install and use isa2. But on Linux and Unix systems you will need a C compiler to install it. E.g. on Ubuntu Linux you will need to install the build-essential package.

Installation

The isa2 package is available from CRAN, the standard R package repository. You can install it on any platform that is supported by GNU R, e.g. Microsoft Windows, Mac OSX and Linux systems. To install it, start R and type in

 install.packages("isa2")

at the prompt. On Linux and Unix-like systems, you will need a working C compiler for a successful installation.

License

The isa2 package is licensed under the Creative Commons Attribution-Noncommercial-Share Alike 3.0 License. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-sa/3.0/ or send a letter to Creative Commons, 171 Second Street, Suite 300, San Francisco, California, 94105, USA.

Tutorials

The Iterative Signature Algorithm for Gene Expression Data

Shows the typical steps of modular analysis, from loading you expression data to the visualization of transcription modules.
HTML PDF Rnw R code

ISA and the biclust package

The biclust package implements several biclustering algorithms. It is possible to convert the results of biclust to transcription modules and vice-versa.
HTML PDF Rnw R code

Tissue specific expression with the Iterative Signature Algorithm

HTML PDF Rnw R code

Hierarchical module trees

A module tree is the hierarchical modular organization of a data set.
HTML PDF Rnw R code

The Iterative Signature Algorithm

Tutorial for the analysis of tabular data with the isa2 R package.
HTML PDF Rnw R code

Running ISA in parallel

Shows how to run ISA on a computer cluster or multi-processor machine, using MPI and the Rmpi and snow R packages.
HTML PDF Rnw R code

ISA internals

HTML PDF Rnw R code

Matlab package

You can download it from here. It also includes the implementation of the Ping-pong algorithm Kutalik2008NB. The "testPP.m" file explains how the algorithm is applied to a pair of toy data sets. To test the ISA functionalities, the "testISA.m" needs to be launched.

Papers

Gaysynsky A, Senft Everson N, Heley K, Chou WS
Perceptions of Health Misinformation on Social Media: Cross-Sectional Survey Study.
JMIR Infodemiology: 2024 Apr 30, 4;e51127
[PubMed:38687591] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Anikamadu O, Ezechi O, Engelhart A, Nwaozuru U, Obiezu-Umeh C, Ogunjemite P, Bale BI, Nwachukwu D, Gbaja-Biamila T, Oladele D, Musa AZ, Mason S, Ojo T, Tucker J, Iwelunmor J
Expanding Youth-Friendly HIV Self-Testing Services During the COVID-19 Pandemic: Qualitative Analysis of a Crowdsourcing Open Call in Nigeria.
JMIR Form Res: 2024 Apr 30, 8;e46945
[PubMed:38687582] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Feng X, Ye W, Liu X, Lu Y, Gao M, Lai R, Chen Y
First Report of Kiwifruit Root Rot Caused by Globisporangium spinosum in China.
Plant Dis: 2024 Apr 30;
[PubMed:38687573] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Onur E, Lee J, Aymerich-Armengol R, Lim J, Dai Y, Tüysüz H, Scheu C, Weidenthaler C
Exploring the Effects of the Photochromic Response and Crystallization on the Local Structure of Noncrystalline Niobium Oxide.
ACS Appl Mater Interfaces: 2024 Apr 30;
[PubMed:38687307] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Sheikh IS, Katyal R, Hadjinicolaou A, Bibby BM, Olandoski M, Nascimento FA, Beniczky S
The online educational tool "Roadmap to EEGs" significantly improved trainee performance in recognizing EEG patterns.
Epileptic Disord: 2024 Apr 30;
[PubMed:38687239] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Berg WA, Berg JM, Bandos AI, Vargo A, Chough DM, Lu AH, Ganott MA, Kelly AE, Nair BE, Hartman JY, Waheed U, Hakim CM, Harnist KS, Reginella RF, Shinde DD, Carlin BA, Cohen CS, Wallace LP, Sumkin JH, Zuley ML
Addition of Contrast-enhanced Mammography to Tomosynthesis for Breast Cancer Detection in Women with a Personal History of Breast Cancer: Prospective TOCEM Trial Interim Analysis.
Radiology: 2024 Apr, 311(1);e231991
[PubMed:38687218] [WorldCat.org: ISSN ESSN ] [DOI] ( p)

Itatani M, Onishi Y, Suematsu NJ, Lagzi I
Periodic Precipitation in a Confined Liquid Layer.
J Phys Chem Lett: 2024 Apr 30;4948-4957
[PubMed:38687169] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Hundt M, Chen A, Donovan J, Kim N, Yilma M, Tana M, Mehta N, Zhou K
Barriers to liver transplant referral in safety net settings: A national provider survey.
Liver Transpl: 2024 May 1;
[PubMed:38687168] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

MacGillivray I, Skvortsov A
Acoustic radiation from multilayered materials using the reciprocity principle.
J Acoust Soc Am: 2024 Apr 1, 155(4);2891-2902
[PubMed:38687145] [WorldCat.org: ISSN ESSN ] [DOI] ( p)

Ardissone A, Leonowicz-Bukała I, Struck-Peregończyk M
"Can Anyone Tell Me…". Online Health Communities in Diabetes Self-Management in Poland and Italy.
Health Commun: 2024 Apr 30;1-8
[PubMed:38687112] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Alberoni C, Pavan G, Scattolin T, Aliprandi A
Critical Aspects and Challenges in the Design of Small Molecules for Electrochemiluminescence (ECL) Application.
Chempluschem: 2024 Apr 30;e202400142
[PubMed:38687095] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Mao R, Yu J, Deng B, Dai X, Du Y, Du S, Zhang W, Rao Y
Conditional chemoconnectomics (cCCTomics) as a strategy for efficient and conditional targeting of chemical transmission.
Elife: 2024 Apr 30, 12;
[PubMed:38686992] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Kim Y
Stent-assisted coil embolization of large coronary artery aneurysm under intravascular ultrasound guidance.
Cardiol J: 2024, 31(2);359-360
[PubMed:38686988] [WorldCat.org: ISSN ESSN ] [DOI] ( p)

Klaudel J, Trenkner W, Pawłowski K, Radowski P, Surman D, Ziniewicz B, Smolarczyk M, Kossakowska-Jemioło U, Krasowski W
Large-bore SOFIA catheter for bailout thrombus aspiration in STEMI.
Cardiol J: 2024, 31(2);352-354
[PubMed:38686985] [WorldCat.org: ISSN ESSN ] [DOI] ( p)

O'Donnell NH, Erlichman S, Nickerson CG
Health Motivation in the Influencer Era: Analyzing Entertainment, Personal, and Social Media Role Models.
Health Commun: 2024 Apr 30;1-12
[PubMed:38686947] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Chappell TC, Maiello KG, Tierney AJ, Yanagi K, Lee JA, Lee K, Mace CR, Bennett CS, Nair NU
Rapid spectrophotometric detection for optimized production of landomycins and characterization of their therapeutic potential.
Biotechnol Bioeng: 2024 Apr 30;
[PubMed:38686918] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Rangkadilok N, Pholphana N, Akanimanee J, Panomvana D, Puranajoti P, Songvut P, Satayavivad J
Comparison of diterpenoid contents and dissolution profiles of selected Andrographis paniculata crude and extract capsules.
Phytochem Anal: 2024 Apr 30;
[PubMed:38686639] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Döring N, Mohseni MR, Pietras L, Dekker A, Briken P
Research in brief: How prevalent is rough sex? Results from a national online sample of adults in Germany.
Perspect Sex Reprod Health: 2024 Apr 30;
[PubMed:38686462] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Lin X, Sun W, Lin M, Chen T, Duan K, Lin H, Zhang C, Qi H
Bicomponent core/sheath melt-blown fibers for air filtration with ultra-low resistance.
RSC Adv: 2024 Apr 25, 14(20);14100-14113
[PubMed:38686297] [WorldCat.org: ISSN ESSN ] [DOI] ( )

Takano M, Taka F, Ogiue C, Nagata N
Online harassment of Japanese celebrities and influencers.
Front Psychol: 2024, 15;1386146
[PubMed:38686089] [WorldCat.org: ISSN ESSN ] [DOI] ( )

Gu X
Enhancing social media engagement using AI-modified background music: examining the roles of event relevance, lyric resonance, AI-singer origins, audience interpretation, emotional resonance, and social media engagement.
Front Psychol: 2024, 15;1267516
[PubMed:38686081] [WorldCat.org: ISSN ESSN ] [DOI] ( )

Song X, Han D, Zhang J, Fan J, Ning P, Peng Y
Study on the impact of COVID-19 pandemic on the mental health of Chinese college students: a cross-sectional analysis.
Front Public Health: 2024, 12;1340642
[PubMed:38686032] [WorldCat.org: ISSN ESSN ] [DOI] ( )

Khan S, McWhorter AR, Andrews DM, Underwood GJ, Moore RJ, Van TTH, Gast RK, Chousalkar KK
A live attenuated Salmonella Typhimurium vaccine dose and diluent have minimal effects on the caecal microbiota of layer chickens.
Front Vet Sci: 2024, 11;1364731
[PubMed:38686027] [WorldCat.org: ISSN ESSN ] [DOI] ( )

Witzel TC, Ghobrial A, Palich R, Charles H, Rodger AJ, Sabin C, Sparrowhawk A, Pool ERM, Prochazka M, Vivancos R, Sinka K, Folkard K, Burns FM, Saunders J
Experiences of mpox illness and case management among cis and trans gay, bisexual and other men who have sex with men in England: a qualitative study.
EClinicalMedicine: 2024 Apr, 70;102522
[PubMed:38685928] [WorldCat.org: ISSN ESSN ] [DOI] ( )

Collier-Sewell F, Monteux S
What is the purpose of nurse education (and what should it be)?
Nurs Inq: 2024 Apr 29;e12640
[PubMed:38685718] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Hung P, Miciak M, Godziuk K, Gross DP, Forhan M
Reducing weight bias and stigma in qualitative research interviews: Considerations for researchers.
Obes Rev: 2024 Apr 29;e13750
[PubMed:38685680] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Expression of Concern: Hydrophobic ammonium based ionic liquids for efficient extraction of textile dyes from aqueous media: Extraction study and antibacterial evaluation.
Chemosphere: 2024 May, 356;142015
[PubMed:38685655] [WorldCat.org: ISSN ESSN ] [DOI] ( o)

Du X, Zhou L, Li Y, Zhang F, Wang L, Yao J, Chen X, Liu S, Cao Y
Effects of yak rumen anaerobic fungus Orpinomyces sp. YF3 fermented on in vitro wheat straw fermentation and microbial communities in dairy goat rumen fluid, with and without fungal flora.
J Anim Physiol Anim Nutr (Berl): 2024 Apr 29;
[PubMed:38685575] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Hauc SC, Mehrzad R, Rivera JC, Hanrahan GB, de Baun HM, Cruz CA, Woo AS
Assessing the Reliability of Facial Feminization Content on Social Media and Its Impact on the Dissemination of Misinformation.
Ann Plast Surg: 2024 May 1, 92(5);580-584
[PubMed:38685497] [WorldCat.org: ISSN ESSN ] [DOI] ( o)

Tarlao C, Leclerc F, Brochu J, Guastavino C
Current approaches to planning (with) sound.
Sci Total Environ: 2024 Apr 27;172826
[PubMed:38685418] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Inkster T, Caldwell I, Aird H, Willis C, Lai S, Mallon J
Development and Evaluation of Test Methods for the Detection and Enumeration of Opportunistic Waterborne Pathogens from the Hospital Environment.
J Hosp Infect: 2024 Apr 27;
[PubMed:38685413] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Liu R, Qiu J, Wang S, Fu R, Qi X, Jian C, Hu Q, Zeng J, Liu N
Hydrochemical and microbial community characteristics and the sources of inorganic nitrogen in groundwater from different aquifers in Zhanjiang, Guangdong Province, China.
Environ Res: 2024 Apr 27;119022
[PubMed:38685304] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Fan Y, Li S, Yang X, Bai S, Tang M, Zhang X, Lu C, Ji C, Du G, Qin Y
Multi-omics approach characterizes the role of Bisphenol F in disrupting hepatic lipid metabolism.
Environ Int: 2024 Apr 24, 187;108690
[PubMed:38685157] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Song DH, Lee JS, Lee JH, Kim DC, Yang JW, Kim MH, Na JM, Cho HK, Yoo J, An HJ
Exosome-mediated secretion of miR-127-3p regulated by RAB27A accelerates metastasis in renal cell carcinoma.
Cancer Cell Int: 2024 Apr 29, 24(1);153
[PubMed:38685086] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Ming S, Han J, Yao X, Guo X, Guo Q, Lei B
Myopia information on TikTok: analysis factors that impact video quality and audience engagement.
BMC Public Health: 2024 Apr 29, 24(1);1194
[PubMed:38685020] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Harrison S, Alderdice F, Quigley MA
Correction: Impact of sampling and data collection methods on maternity survey response: a randomised controlled trial of paper and push‑to‑web surveys and a concurrent social media survey.
BMC Med Res Methodol: 2024 Apr 29, 24(1);100
[PubMed:38684950] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Gaizer T, Juhász J, Pillér B, Szakadáti H, Pongor CI, Csikász-Nagy A
Integrative analysis of yeast colony growth.
Commun Biol: 2024 Apr 29, 7(1);511
[PubMed:38684888] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Huang Y, Zhou S, Su Y, Pang Z, Cai S
Diffusion-weighted imaging as a potential non-gadolinium alternative for immediate assessing the hyperacute outcome of MRgFUS ablation for uterine fibroids.
Sci Rep: 2024 Apr 29, 14(1);9857
[PubMed:38684835] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Sajjadi H, Mansouri N, Nabavi SN, Delouei AA, Atashafrooz M
Sensitivity analysis of natural convection in a porous cavity filled with nanofluid and equipped with horizontal fins using various optimization methods and MRT-LB.
Sci Rep: 2024 Apr 29, 14(1);9847
[PubMed:38684789] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Peprah P, Oduro MS, Atta-Osei G, Addo IY, Morgan AK, Gyasi RM
Problematic social media use mediates the effect of cyberbullying victimisation on psychosomatic complaints in adolescents.
Sci Rep: 2024 Apr 29, 14(1);9773
[PubMed:38684725] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Kim H, Jun T, Lee H, Chae BG, Yoon M, Kim C
Deep-learning based 3D birefringence image generation using 2D multi-view holographic images.
Sci Rep: 2024 Apr 30, 14(1);9879
[PubMed:38684698] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Slowiak JM, McDonough M
Job Burnout, Work Health Management Interference, and Organizational Health Climate Among Employees with Varied Levels of Work Ability.
J Occup Rehabil: 2024 Apr 30;
[PubMed:38684640] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Potolicchio A, Jehaes C, Merlot B, Assenat V, Dennis T, Roman H, Francois MO, Denost Q
Treatment techniques for rectovaginal fistulas after low rectal resection for deep endometriosis.
Tech Coloproctol: 2024 Apr 29, 28(1);51
[PubMed:38684547] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Keyes K, Hamilton A, Finsaas M, Kreski N
Childhood internalizing, externalizing and attention symptoms predict changes in social and nonsocial screen time.
Soc Psychiatry Psychiatr Epidemiol: 2024 Apr 29;
[PubMed:38684513] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

von der Emde L, Rennen GC, Vaisband M, Hasenauer J, Liegl R, Fleckenstein M, Pfau M, Holz FG, Ach T
Impact of lens autofluorescence and opacification on retinal imaging.
BMJ Open Ophthalmol: 2024 Apr 29, 9(1);
[PubMed:38684375] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Achenbach L, Bloch H, Klein C, Damm T, Obinger M, Rudert M, Krutsch W, Szymski D
Four distinct patterns of anterior cruciate ligament injury in women's professional football (soccer): a systematic video analysis of 37 match injuries.
Br J Sports Med: 2024 Apr 29;
[PubMed:38684328] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Gamble AR, McKay MJ, Anderson DB, Pappas E, Alvarez Cooper I, Macpherson S, Harris IA, Filbay SR, McCaffery K, Thompson R, Hoffmann TC, Maher CG, Zadro JR
Development of a patient decision aid for children and adolescents following anterior cruciate ligament rupture: an international mixed-methods study.
BMJ Open: 2024 Apr 29, 14(4);e081421
[PubMed:38684251] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Gerritsen JKW, Young JS, Chang SM, Krieg SM, Jungk C, van den Bent MJ, Satoer DD, Ille S, Schucht P, Nahed BV, Broekman MLD, Berger M, De Vleeschouwer S, Vincent AJPE
SUPRAMAX-study: supramaximal resection versus maximal resection for glioblastoma patients: study protocol for an international multicentre prospective cohort study (ENCRAM 2201).
BMJ Open: 2024 Apr 29, 14(4);e082274
[PubMed:38684246] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Ebigbo A, Wanzl J, Afify S, Nagl S, Messmann H
Endoscopic suture-based closure of a dehiscent rectal stump.
Endoscopy: 2024 Dec, 56(S 01);E381
[PubMed:38684202] [WorldCat.org: ISSN ESSN ] [DOI] ( o)

De Cristofaro E, Lafeuille P, Rivory J, DʼAlmeida R, Masgnaux LJ, Lupu A, Pioche M
A simple and low impact glove tip to achieve colonic endoscopic submucosal dissection with adaptive traction in patients with stoma.
Endoscopy: 2024 Dec, 56(S 01);E379-E380
[PubMed:38684201] [WorldCat.org: ISSN ESSN ] [DOI] ( o)

Xiong X, Tian Y, Zhao D, Qian S, Ran H, Pan T, Ma Y
Diagnosis and treatment of a rare small intestine duplication in adult under double-balloon enteroscopy and laparoscopy.
Endoscopy: 2024 Dec, 56(S 01);E377-E378
[PubMed:38684200] [WorldCat.org: ISSN ESSN ] [DOI] ( o)

Sawada K, Matsumori T, Nishikawa Y, Maruno T, Shiokawa M, Uza N, Seno H
Removal of a torn biliary stent fragment using a novel tapered-tip sheath system.
Endoscopy: 2024 Dec, 56(S 01);E374-E376
[PubMed:38684199] [WorldCat.org: ISSN ESSN ] [DOI] ( o)

Hamada K, Horikawa Y, Techigawara K, Nagahashi T, Ishikawa M, Honda M, Sugai T
Mucosal flap creation in colorectal endoscopic submucosal dissection using a V-shaped incision.
Endoscopy: 2024 Dec, 56(S 01);E372-E373
[PubMed:38684198] [WorldCat.org: ISSN ESSN ] [DOI] ( o)

Yi Y, Cao TT, Gan T, Wang Z
A modified transparent cap-assisted delivery method for capsule endoscopy.
Endoscopy: 2024 Dec, 56(S 01);E370-E371
[PubMed:38684197] [WorldCat.org: ISSN ESSN ] [DOI] ( o)

Pawlak KM, Teshima C
Resolution of dysphagia following endoscopic resection of a large, nodular, esophageal inlet patch with low grade dysplasia.
Endoscopy: 2024 Dec, 56(S 01);E369
[PubMed:38684196] [WorldCat.org: ISSN ESSN ] [DOI] ( o)

Fukuda S, Hijioka S, Nagashio Y, Maruki Y, Chatto M, Saito Y, Okusaka T
Forward-viewing echoendoscope aids tissue acquisition via the afferent limb after pancreaticoduodenectomy.
Endoscopy: 2024 Dec, 56(S 01);E366-E368
[PubMed:38684195] [WorldCat.org: ISSN ESSN ] [DOI] ( o)

Colijn MA, Crockford DN
18q Deletion Syndrome-Associated Schizophrenia: A Case Report.
Neuropsychobiology: 2024 Apr 29;1-4
[PubMed:38684151] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Fox M
Physician Assistant Educators' Production Blueprint for Video Pedagogy.
J Physician Assist Educ: 2024 Apr 30;
[PubMed:38684095] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Swistak MSc Z, Sookoo Ma S, Jewell PhD T
Integrating Subjective Recovery and Stigma Resistance in Individuals with Schizophrenia: A Narrative Review and Theoretical Integration.
Issues Ment Health Nurs: 2024 Apr 29;1-14
[PubMed:38684074] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Fekih-Romdhane F, Obeid S, Rogoza R, Gerges S, Hallit S
Moderating Effect of Trait Mindfulness in the Association Between Problematic Social Media Use and Anxiety Among Lebanese University Students.
Prim Care Companion CNS Disord: 2024 Apr 16, 26(2);
[PubMed:38684016] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Yuk J, Pandey A, Park L, Bemis WE, Jung S
Effect of skull morphology on fox snow diving.
Proc Natl Acad Sci U S A: 2024 May 7, 121(19);e2321179121
[PubMed:38683988] [WorldCat.org: ISSN ESSN ] [DOI] ( o)

Senior C, Stewart PA, Bucy E, Lee N
Winners and losers: Emotional shifts across elections are conveyed by a politician's smile.
PLoS One: 2024, 19(4);e0301113
[PubMed:38683807] [WorldCat.org: ISSN ESSN ] [DOI] ( )

Mishra NR, Gutheil WG
Stereoselective Amine-omics Using Heavy Atom Isotope Labeled l- and d-Marfey's Reagents.
J Am Soc Mass Spectrom: 2024 Apr 29;
[PubMed:38683793] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Chaudhary K, Zulfiqar S, ALOthman ZA, Shakir I, Warsi MF, Cochran EW
Three-dimensional bimodal pore-rich G/MXene sponge amalgamated with vanadium diselenide nanosheets as a high-performance electrode for electrochemical water-oxidation/reduction reactions.
Dalton Trans: 2024 Apr 29;
[PubMed:38683625] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Mondo GB, Cathcarth M, Longo GS, Picco AS, Cardoso MB
Short Zwitterionic Sulfobetaine-Modified Silica Nanoparticles: Is Neutrality Possible?
Langmuir: 2024 Apr 29;
[PubMed:38683600] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Criado-Gonzalez M, Peñas MI, Barbault F, Müller AJ, Boulmedais F, Hernández R
Salt-induced Fmoc-tripeptide supramolecular hydrogels: a combined experimental and computational study of the self-assembly.
Nanoscale: 2024 Apr 29;
[PubMed:38683577] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Torre AC, Bastard DP, Diehl M, Rosa-Diez G, Volonteri V, Mazzuoccolo LD, Belatti AL
[Calciphylaxis, risk factors, treatment and outcomes. Retrospective study of 39 patients].
Medicina (B Aires): 2024, 84(2);196-205
[PubMed:38683504] [WorldCat.org: ISSN ESSN ] ( p)

Zhang Y, He W, Shi X, Chen M, Bao C, Ji Y
Effects of earthworms on antibiotic resistance genes in different soil-plant systems.
Environ Sci Pollut Res Int: 2024 Apr 29;
[PubMed:38683428] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Reis EP, Blankemeier L, Zambrano Chaves JM, Jensen MEK, Yao S, Truyts CAM, Willis MH, Adams S, Amaro E Jr, Boutin RD, Chaudhari AS
Automated abdominal CT contrast phase detection using an interpretable and open-source artificial intelligence algorithm.
Eur Radiol: 2024 Apr 29;
[PubMed:38683384] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Zheng K, Qian J, Jiang N, Zhou J, Wang L, Zhang F
Unexpected discovery of renal mass in a patient with granulomatosis with polyangiitis: accidental or inevitable?
Clin Exp Rheumatol: 2024 Apr, 42(4);905-913
[PubMed:38683205] [WorldCat.org: ISSN ESSN ] [DOI] ( o)

Michel L, Durand P, Chevalier A
A Naphthalimide based "Turn-ON" probe for wash-free imaging of lipid-droplet in living cells with an excellent selectivity.
Chembiochem: 2024 Apr 29;e202400270
[PubMed:38683177] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Denijs E, Unal K, Bevernaege K, Kasmi S, De Geest BG, Winne JM
Thermally Triggered Triazolinedione-Tyrosine Bioconjugation with Improved Chemo- and Site-Selectivity.
J Am Chem Soc: 2024 Apr 29;
[PubMed:38683141] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Kharkwal A, Clayton RB, Park J, Ridgway JL, Merle P
Are Instagram Gym Advertisements Working Out? An Experimental Study of Model Body-Size and Slogan-Type.
Health Commun: 2024 Apr 29;1-12
[PubMed:38683111] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Tarango-García A, Lugo-Reyes SO, Alvarez-Cardona A
[Feeling analysis on allergen immunotherapy on Twitter using an unsupervised machine learning model].
Rev Alerg Mex: 2024 Feb 1, 71(1);8-11
[PubMed:38683063] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Ali E, Červenková L, Pálek R, Ambrozkiewicz F, Pavlov S, Ye W, Hošek P, Daum O, Liška V, Hemminki K, Trailin A
Mast Cells in the Microenvironment of Hepatocellular Carcinoma Confer Favorable Prognosis: A Retrospective Study using QuPath Image Analysis Software.
J Vis Exp: 2024 Apr 12, (206);
[PubMed:38682951] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Krishnia L, Kashyap MK
Development of Compendium for Esophageal Squamous Cell Carcinoma.
J Vis Exp: 2024 Apr 12, (206);
[PubMed:38682946] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Gaizo Moore VD, Haenel G, Judge A
Assessment of Mitochondrial Oxygen Consumption Using a Plate Reader-based Fluorescent Assay.
J Vis Exp: 2024 Apr 12, (206);
[PubMed:38682942] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Merighi F, De Vincentiis S, Onorati M, Raffa V
Long-Term Mouse Spinal Cord Organotypic Slice Culture as a Platform for Validating Cell Transplantation in Spinal Cord Injury.
J Vis Exp: 2024 Apr 12, (206);
[PubMed:38682940] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Polikarpova A, Bucher C, Ellinghaus A, Okulski H, Duda G, Schmidt-Bleek K, Tanaka EM
Stabilizing a Femur Osteotomy with a Plate Fixation in Ambystoma mexicanum.
J Vis Exp: 2024 Apr 12, (206);
[PubMed:38682939] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Gulsever CI, Öztürk M, Sahin D, Koksoy F, Ornek V, Aydoseli A, Sencer A
Full-Endoscopic Surgery for Hypothalamic Hamartoma Resection.
J Vis Exp: 2024 Apr 12, (206);
[PubMed:38682937] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Song H, Jia J, Zhao D, Guo M, Wang F, Hou K, Jiang N, Fu Z, Zhou J, Zhang H, Ding Y, Yang Y, Chen C, Jia X, Hou Z, Yang S
Endoscopic Balloon Dilatation of the Eustachian Tube via the Soft Palate Approach in Miniature Pigs.
J Vis Exp: 2024 Apr 12, (206);
[PubMed:38682934] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Jia PP, Liu XR, Wu MF, Li Y, Zhang LC, Pei DS
Generation, Maintenance, and Identification of Germ-Free Zebrafish Models from Larvae to Juvenile Stages.
J Vis Exp: 2024 Apr 12, (206);
[PubMed:38682933] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Eddy RL, Xu GH, Leipsic JA, Leung JM, Sin DD, Hall CS, Tam RC
Multi-modal Pulmonary Imaging: Using Complementary Information from CT and Hyperpolarized 129Xe MRI to Evaluate Lung Structure-Function.
J Vis Exp: 2024 Apr 12, (206);
[PubMed:38682932] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Li J, Liu Y, Li RT, Liu Y, Li F
The Effect of Anti-fatigue Decoction on the Behaviors and Serological Indicators in a Central Fatigue Rat Model.
J Vis Exp: 2024 Apr 12, (206);
[PubMed:38682926] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Coenradij J, Bailoni E, Poolman B
Construction of Out-of-Equilibrium Metabolic Networks in Nano- and Micrometer-Sized Vesicles.
J Vis Exp: 2024 Apr 12, (206);
[PubMed:38682922] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Stoneback L, Fullano GD, White MS, Naaz S, Lepley LK
Development of a Low-cost Epimysial Electromyography Electrode: A Simplified Workflow for Fabrication and Testing.
J Vis Exp: 2024 Apr 12, (206);
[PubMed:38682921] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Zabel WJ, Allam N, Contreras Sanchez HA, Foltz W, Flueraru C, Taylor E, Vitkin A
A Dorsal Skinfold Window Chamber Tumor Mouse Model for Combined Intravital Microscopy and Magnetic Resonance Imaging in Translational Cancer Research.
J Vis Exp: 2024 Apr 12, (206);
[PubMed:38682919] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Gong T, Huang Q, Zhang H, Liu C, Su X, Yang Y, Liu X, Zheng Y, Ye H
Press Needle: A Traditional Chinese Medicine Therapy for Myopia Patients with Dry Eye.
J Vis Exp: 2024 Apr 12, (206);
[PubMed:38682910] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Bai YZ, Yokoyama Y, Li W, Terada Y, Kreisel D, Nava RG
Murine Left Pulmonary Hilar Clamp Model of Lung Ischemia Reperfusion Injury.
J Vis Exp: 2024 Apr 12, (206);
[PubMed:38682909] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Michaelis S, Chen T, Schmid C, Hilbi H
Nitric oxide signaling through three receptors regulates virulence, biofilm formation, and phenotypic heterogeneity of Legionella pneumophila.
mBio: 2024 Apr 29;e0071024
[PubMed:38682908] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Kiraly JK, Harris SC, Al-Khindi T, Dunn FA, Kolodkin AL
PyOKR: A Semi-Automated Method for Quantifying Optokinetic Reflex Tracking Ability.
J Vis Exp: 2024 Apr 12, (206);
[PubMed:38682904] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Morrow CS, Gillette AA, Skala MC, Moore DL
Classification of Neural Stem Cell Activation State In Vitro using Autofluorescence.
J Vis Exp: 2024 Apr 12, (206);
[PubMed:38682901] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Kvalem IL, Dahr Nygaard IM, Træen B, Ivanova A, Dahlgren CL
Menstrual attitudes in adult women: A cross-sectional study on the association with menstruation factors, contraceptive use, genital self-image, and sexual openness.
Womens Health (Lond): 2024 Jan-Dec, 20;17455057241249553
[PubMed:38682834] [WorldCat.org: ISSN ESSN ] [DOI] ( p)

Fayos M, Arnaiz de Las Revillas F, González Quintanilla V, González-Rico C, Fariñas-Álvarez C, Parra JA, Fariñas MC
Progression of subclinical cardiovascular disease in patients with HIV.
Rev Esp Quimioter: 2024 Apr 29;
[PubMed:38682819] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Doleman B, Fonnes S, Lund JN, Boyd-Carson H, Javanmard-Emamghissi H, Moug S, Hollyman M, Tierney G, Tou S, Williams JP
Appendectomy versus antibiotic treatment for acute appendicitis.
Cochrane Database Syst Rev: 2024 Apr 29, 4(4);CD015038
[PubMed:38682788] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Magis-Weinberg L, Arreola Vargas M, Carrizales A, Trinh CT, Muñoz Lopez DE, Hussong AM, Lansford JE
The impact of COVID-19 on the peer relationships of adolescents around the world: A rapid systematic review.
J Res Adolesc: 2024 Apr 29;
[PubMed:38682766] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Garg J, Kewcharoen J, Contractor T, Mandapati R, Bhardwaj R
Intracardiac Echocardiogram from Persistent Left Superior Vena Cava.
Am J Cardiol: 2024 Jan 1, 210;225-228
[PubMed:38682714] [WorldCat.org: ISSN ESSN ] [DOI] ( o)

Shinjoh M, Togo K, Hayamizu T, Yonemoto N, Morii J, Perdrizet J, Kamei K
Cost-effectiveness analysis of 20-valent pneumococcal conjugate vaccine for routine pediatric vaccination programs in Japan.
Expert Rev Vaccines: 2024 Apr 29;
[PubMed:38682661] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Menezes TDS, Martini MM, Lotto M, Jucá AM, Jorge OS, Cruvinel A, Cruvinel T
Untangling the truth: User engagement with misinformation in toothache-related Facebook posts.
Community Dent Health: 2024 Apr 9;
[PubMed:38682571] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Ghali H, Albers SE
An updated review on the safety of N, N-diethyl-meta-toluamide insect repellent use in children and the efficacy of natural alternatives.
Pediatr Dermatol: 2024 Jan 19;
[PubMed:38682561] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

<biblio>

1. Kutalik2008NB pmid=18464786 // PDF
2. Ihmels2004 pmid=15606968 // PDF
3. Ihmels2004a pmid=15044247 // PDF
4. Bergmann2004 pmid=14737187 // PDF
5. Bergmann2003 pmid=12689096 //PDF
6. Ihmels2002 pmid=12134151 // PDF

</biblio>