ISA

Large sets of data, like expression profile from many samples, require analytic tools to reduce their complexity. The Iterative Signature Algorithm (ISA) was designed to reduce the complexity of very large sets of data by decomposing it into so-called "modules". In the context of gene expression data these modules consist of subsets of genes that exhibit a coherent expression profile only over a subset of microarray experiments. Genes and arrays may be attributed to multiple modules and the level of required coherence can be varied resulting in different "resolutions" of the modular mapping. Since the ISA does not rely on the computation of correlation matrices (like many other tools), it is extremely fast even for very large datasets.

Software for Gene expression data

We developed the eisa GNU R package to facilitate the modular analysis of gene expression data. The package uses standard BioConductor data structures and includes various visualization tools as well.

Requirements, download and installation

To use eisa you will need a working GNU R installation.

As of the 23rd of April, 2010, the eisa package is an official BioConductor package.

eisa depends on a number of other R packages: isa2, Biobase, AnnotationDbi, Category, genefilter, DBI. The good news is that all these dependencies are installed automatically, and all you need to do is to start R and type in

 source("http://bioconductor.org/biocLite.R")
 biocLite("eisa")

at your R prompt. See the eisa package page at the BioConductor website for details.

Alternatively, you can also download the package from here:

• Microsoft Windows (32 bit)
  Download this file, save it in a temporary directory, and then start R. From the Packages menu choose 'Install packages from local zip files' and select the saved file.
• Microsoft Windows (64 bit)
  Download this file, save it in a temporary directory, and then start R. From the Packages menu choose 'Install packages from local zip files' and select the saved file.
• Mac OSX (Leopard)
  Download and install this file.
• Linux and Unix systems, R source package
  Download this file, save it in a temporary directory, and start R. Install the downloaded package using the install.packages() function: give the full path of the saved file and use the 'repos=NULL' argument of install.packages().

License

The eisa package is licensed under the GNU General Public License, version 2 or later. For details, see http://www.gnu.org/licenses/old-licenses/gpl-2.0.html.

Software for any tabular data

The ISA can be applied to identify coherent substructures (i.e. modules) from any rectangular matrix of data. You can use the isa2 R package for such an analysis.

Requirements

No additional R package is required to install and use isa2. But on Linux and Unix systems you will need a C compiler to install it. E.g. on Ubuntu Linux you will need to install the build-essential package.

Installation

The isa2 package is available from CRAN, the standard R package repository. You can install it on any platform that is supported by GNU R, e.g. Microsoft Windows, Mac OSX and Linux systems. To install it, start R and type in

 install.packages("isa2")

at the prompt. On Linux and Unix-like systems, you will need a working C compiler for a successful installation.

License

The isa2 package is licensed under the Creative Commons Attribution-Noncommercial-Share Alike 3.0 License. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-sa/3.0/ or send a letter to Creative Commons, 171 Second Street, Suite 300, San Francisco, California, 94105, USA.

Tutorials

The Iterative Signature Algorithm for Gene Expression Data

Shows the typical steps of modular analysis, from loading you expression data to the visualization of transcription modules.
HTML PDF Rnw R code

ISA and the biclust package

The biclust package implements several biclustering algorithms. It is possible to convert the results of biclust to transcription modules and vice-versa.
HTML PDF Rnw R code

Tissue specific expression with the Iterative Signature Algorithm

HTML PDF Rnw R code

Hierarchical module trees

A module tree is the hierarchical modular organization of a data set.
HTML PDF Rnw R code

The Iterative Signature Algorithm

Tutorial for the analysis of tabular data with the isa2 R package.
HTML PDF Rnw R code

Running ISA in parallel

Shows how to run ISA on a computer cluster or multi-processor machine, using MPI and the Rmpi and snow R packages.
HTML PDF Rnw R code

ISA internals

HTML PDF Rnw R code

Matlab package

You can download it from here. It also includes the implementation of the Ping-pong algorithm Kutalik2008NB. The "testPP.m" file explains how the algorithm is applied to a pair of toy data sets. To test the ISA functionalities, the "testISA.m" needs to be launched.

Papers

Lau N, Zhao X, O'Daffer A, Weissman H, Barton K
Pediatric Cancer Communication on Twitter: Natural Language Processing and Qualitative Content Analysis.
JMIR Cancer: 2024 May 7, 10;e52061
[PubMed:38713506] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Issa M, Kalliri V, Euteneuer S, Krümpelmann A, Seitz A, Sommerburg O, Westhoff JH, Syrbe S, Lenga P, Grutza M, Scherer M, Neumann JO, Baumann I, Unterberg AW, El Damaty A
The association of COVID-19 pandemic with the increase of sinogenic and otogenic intracranial infections in children: a 10-year retrospective comparative single-center study.
Neurosurg Rev: 2024 May 7, 47(1);205
[PubMed:38713418] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Fenton T, Bastida E
Beliefs and Perceptions of Physical Activity Among Black Adolescents in South Florida: A Qualitative Study.
J Racial Ethn Health Disparities: 2024 May 7;
[PubMed:38713371] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Kemp PL, Sinclair AH, Adcock RA, Wahlheim CN
Memory and belief updating following complete and partial reminders of fake news.
Cogn Res Princ Implic: 2024 May 7, 9(1);28
[PubMed:38713308] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Yang D, Chen X, Huang L, Wang X, Mao L, Lin L, Han H, Lu Q
Correlation between CEUS LI-RADS categorization of HCC < 20 mm and clinic-pathological features.
Insights Imaging: 2024 May 7, 15(1);110
[PubMed:38713251] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Turner S, Kranzler EC, Trigger S, Kearsley A, Luchman JN, Williams CJ, Denison B, Dahlen H, Kim JC, Bennett M, Nighbor T, Beleche T, Hoffman L, Peck J
Benefit-Cost Analysis of the HHS COVID-19 Campaign: April 2021-March 2022.
Am J Prev Med: 2024 Apr 22;
[PubMed:38713123] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Kang KM, Song J, Choi Y, Park C, Park JE, Kim HS, Park SH, Park CK, Choi SH
MRI Scoring Systems for Predicting Isocitrate Dehydrogenase Mutation and Chromosome 1p/19q Codeletion in Adult-type Diffuse Glioma Lacking Contrast Enhancement.
Radiology: 2024 May, 311(2);e233120
[PubMed:38713025] [WorldCat.org: ISSN ESSN ] [DOI] ( p)

Brudenell EL, Pohare MB, Zafred D, Phipps J, Hornsby HR, Darby J, Dai J, Liggett E, Cain K, Barran P, de Silva TI, Sayers JR
Efficient overexpression and purification of SARS-CoV-2 Nucleocapsid proteins in Escherichia coli.
Biochem J: 2024 May 7;
[PubMed:38713013] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Love B, Lindstadt C, Cone JN, Bazan CH, Pounders K, Khurshid A
Creativity in Health Communication to Promote Blood Lead Testing in Children.
Health Promot Pract: 2024 May 7;15248399241249950
[PubMed:38712905] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Li C, Yin X, Wang S, Sui S, Liu J, Sun X, Di J, Chen R, Chen D, Han Y, Xie K, Dai J
A Cytochrome P450 Enzyme Catalyses Oxetane Ring Formation in Paclitaxel Biosynthesis.
Angew Chem Int Ed Engl: 2024 May 7;e202407070
[PubMed:38712793] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Nakkash R, Mugharbil S, Tleis M, Jaafar M, Asfar T, Maziak W
Implementing pictorial health warning labels on waterpipe tobacco products in Lebanon: A policy framework analysis of content, actors, context, and process.
Nicotine Tob Res: 2024 May 7;
[PubMed:38712750] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Segherlou ZH, Shakeri-Darzekonani M, Khavandegar A, Stephenson S, Ciccone K, Masheghati F, Hosseini Siyanaki MR, Lyerly M, Lucke-Wold B
Hormonal influences on cerebral aneurysms: unraveling the complex connections.
Expert Rev Endocrinol Metab: 2024 May 7;1-9
[PubMed:38712738] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Van Kampen A, Sundt Rd TM, Melnitchouk S
Blending three repair techniques in a case of complex mitral valve endocarditis.
Multimed Man Cardiothorac Surg: 2024 May 7, 2024;
[PubMed:38712707] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Baskota S, Shaker N, Balassanian R, Vohra P
Cytopathology in the era of social media.
Diagn Cytopathol: 2024 May 7;
[PubMed:38712619] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Zhang J, Ma Z, Wang L, Ni H, Yu J, Zhao B
N/P-doped NiFeV oxide nanosheets with oxygen vacancies as an efficient electrocatalyst for the oxygen evolution reaction.
Dalton Trans: 2024 May 7;
[PubMed:38712573] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Ni Q, Zhu Z, Wang Y, Jiang C, Wang M, Zhang X
A pillar-layered Ni(2)P-Ni(5)P(4)-CoP array derived from a metal-organic framework as a bifunctional catalyst for efficient overall water splitting.
Dalton Trans: 2024 May 7;
[PubMed:38712507] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Ameen A, Shaikh K, Khan A, Vohra LM
The discerning influence of dynamic contrast-enhanced MRI in anticipating molecular subtypes of breast cancer through the artistry of artificial intelligence - a narrative review.
J Pak Med Assoc: 2024 Apr, 74(4 (Supple-4));S72-S78
[PubMed:38712412] [WorldCat.org: ISSN ESSN ] [DOI] ( p)

Arif F, Safri MK, Shahzad Z, Yasmeen SF, Rahman MF, Shaikh SA
Exploring the application of CHATGPT in plastic surgery: a comprehensive systematic review.
J Pak Med Assoc: 2024 Apr, 74(4 (Supple-4));S17-S28
[PubMed:38712405] [WorldCat.org: ISSN ESSN ] [DOI] ( p)

Xia M, Varmazyad M, Pla-Palacín I, Gavlock DC, DeBiasio R, LaRocca G, Reese C, Florentino R, Faccioli LAP, Brown JA, Vernetti LA, Schurdak M, Stern AM, Gough A, Behari J, Soto-Gutierrez A, Taylor DL, Miedel MT
Comparison of Wild-Type and High-risk PNPLA3 variants in a Human Biomimetic Liver Microphysiology System for Metabolic Dysfunction-associated Steatotic Liver Disease Precision Therapy.
bioRxiv: 2024 Apr 30;
[PubMed:38712213] [DOI] ( e)

Castellano M, Blanco V, Calzi ML, Costa B, Witwer K, Hill M, Cayota A, Segovia M, Tosar JP
Ribonuclease activity undermines immune sensing of naked extracellular RNA.
bioRxiv: 2024 Apr 23;
[PubMed:38712104] [DOI] ( e)

Lee SJ, Jeon O, Lee YB, Alt DS, Ding A, Tang R, Alsberg E
In situ cell condensation-based cartilage tissue engineering via immediately implantable high-density stem cell core and rapidly degradable shell microgels.
bioRxiv: 2024 Apr 25;
[PubMed:38712035] [DOI] ( e)

Kolbinger FR, El Nahhas OSM, Nackenhorst MC, Brostjan C, Eilenberg W, Busch A, Kather JN
Histopathological evaluation of abdominal aortic aneurysms with deep learning.
medRxiv: 2024 Apr 24;
[PubMed:38712033] [DOI] ( e)

Caron AJ, Ali IJ, Delgado MJ, Johnson D, Reeks JM, Strzhemechny YM, McGillivray SM
Zinc oxide nanoparticles mediate bacterial toxicity in Mueller-Hinton Broth via Zn(2).
Front Microbiol: 2024, 15;1394078
[PubMed:38711974] [WorldCat.org: ISSN ESSN ] [DOI] ( )

Shi Y, Niu X, Yang H, Chu M, Wang N, Bao H, Zhan F, Yang R, Lou K
Optimization of the fermentation media and growth conditions of Bacillus velezensis BHZ-29 using a Plackett-Burman design experiment combined with response surface methodology.
Front Microbiol: 2024, 15;1355369
[PubMed:38711968] [WorldCat.org: ISSN ESSN ] [DOI] ( )

Gesselman AN, Kaufman EM, Weeks LYS, Moscovici Z, Bennett-Brown M, Adams OR, Campbell JT, Piazza M, Bhuyan L, Dubé S, Hille JJ, Garcia JR
Exploring patterns in mental health treatment and interests of single adults in the United States: a secondary data analysis.
Front Public Health: 2024, 12;1292603
[PubMed:38711766] [WorldCat.org: ISSN ESSN ] [DOI] ( )

Bondielli A, Dell'Oglio P, Lenci A, Marcelloni F, Passaro L
Dataset for multimodal fake news detection and verification tasks.
Data Brief: 2024 Jun, 54;110440
[PubMed:38711737] [WorldCat.org: ISSN ESSN ] [DOI] ( )

Rathod P, Mankar N, Nikhade P, Chandak M, Patel A, Ikhar A
Reattachment of Fractured Tooth: A Comprehensive Review.
Cureus: 2024 Apr, 16(4);e57715
[PubMed:38711713] [WorldCat.org: ISSN ESSN ] [DOI] ( )

Siddoo V, Janchai W, Thinnukool O
Understanding the multidimensional role of medical travel facilitators: A study on competencies and a proposed model.
Heliyon: 2024 May 15, 10(9);e30479
[PubMed:38711657] [WorldCat.org: ISSN ESSN ] [DOI] ( )

Lim J, Hwang J
Exploring diverse interests of collaborators in smart cities: A topic analysis using LDA and BERT.
Heliyon: 2024 May 15, 10(9);e30367
[PubMed:38711650] [WorldCat.org: ISSN ESSN ] [DOI] ( )

Alsemaree O, Alam AS, Gill SS, Uhlig S
Sentiment analysis of Arabic social media texts: A machine learning approach to deciphering customer perceptions.
Heliyon: 2024 May 15, 10(9);e27863
[PubMed:38711635] [WorldCat.org: ISSN ESSN ] [DOI] ( )

Kar M, Pozo-Gonzalo C
Enhancing the Life Cycle of Zinc-Iodine Batteries in Ionic Liquid-Based Electrolyte.
Angew Chem Int Ed Engl: 2024 May 6;e202405244
[PubMed:38711382] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Patsouras M, Cook M, Pennay A, Kuntsche E, Manning V, He Z, Riordan BC
Support for a browser plug-in blocking online alcohol imagery among Australian participants: A qualitative interview study.
Health Promot J Austr: 2024 May 6;
[PubMed:38711327] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Kim TH
Toxic Shock Syndrome (TSS) Caused by Group A Streptococcus: Novel Insights Within the Context of a Familiar Clinical Syndrome.
J Korean Med Sci: 2024 May 6, 39(17);e154
[PubMed:38711318] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Chen L, Tian FF, Fu Y, Cahana E
Dementia Knowledge in Chinese Newspapers (2005-2020): A Topic Modeling Analysis.
J Aging Soc Policy: 2024 May 6;1-17
[PubMed:38711246] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Liu J, Shi R, Hornik RC
Modification Mechanisms of Descriptive Norm Perceptions Toward Vaping: The Role of Behavior Prevalence and Group Size in an Online Setting.
Health Commun: 2024 May 6;1-13
[PubMed:38711233] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Sirtoli R, Fernández-Rodríguez R, Balboa-Castillo T, Rodrigues R, Garrido-Miguel M, Eumann Mesas A, Morales G, Molino Guidoni C
Time spent on social media and depressive symptoms in university students: The mediating role of psychoactive substances.
Am J Addict: 2024 May 6;
[PubMed:38711188] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Lewis-Hunstiger M
Uncovering and Expressing our Purpose.
Creat Nurs: 2024 May 6;10784535241250195
[PubMed:38711170] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Pastura P, McDaniel CG, Alharbi S, Fox D, Coleman B, Malik P, Adams DM, Le Cras TD
NRAS(Q61R) mutation drives elevated angiopoietin-2 expression in human endothelial cells and a genetic mouse model.
Pediatr Blood Cancer: 2024 May 6;e31032
[PubMed:38711167] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Jurburg SD, Blowes SA, Shade A, Eisenhauer N, Chase JM
Synthesis of recovery patterns in microbial communities across environments.
Microbiome: 2024 May 6, 12(1);79
[PubMed:38711157] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Lu H, Zuo X, Yuan J, Xie Z, Yin L, Pu Y, Chen Z, Zhang J
Research progress in the development of 3D skin models and their application to in vitro skin irritation testing.
J Appl Toxicol: 2024 May 6;
[PubMed:38711121] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Ma X, Yang Y, Qian S, Ding Y, Lin Q, Wang N
Perceptions of Chinese women with a history of gestational diabetes regarding health behaviors and related factors: a directed qualitative content analysis.
BMC Public Health: 2024 May 6, 24(1);1237
[PubMed:38711101] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Varrelman TJ, Rader B, Remmel C, Tuli G, Han AR, Astley CM, Brownstein JS
Vaccine effectiveness against emerging COVID-19 variants using digital health data.
Commun Med (Lond): 2024 May 6, 4(1);81
[PubMed:38710936] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Díaz-Cruz GA, Bignell DRD
Exploring the specialized metabolome of the plant pathogen Streptomyces sp. 11-1-2.
Sci Rep: 2024 May 6, 14(1);10414
[PubMed:38710735] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Dedhe AM, Chowkase AA, Gogate NV, Kshirsagar MM, Naphade R, Naphade A, Kulkarni P, Naik M, Dharm A, Raste S, Patankar S, Jogdeo CM, Sathe A, Kulkarni S, Bapat V, Joshi R, Deshmukh K, Lele S, Manke-Miller KJ, Cantlon JF, Pandit PS
Conventional and frugal methods of estimating COVID-19-related excess deaths and undercount factors.
Sci Rep: 2024 May 6, 14(1);10378
[PubMed:38710715] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Garg P, Chetwood J, Phan T, Gray T, McKew G
A tale of two studies: is peripheral eosinophilia associated with Dientamoeba fragilis detection in adult stool samples?
Pathology: 2024 Apr 9;
[PubMed:38710610] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Pasqualotto BA, Tegeman C, Frame AK, McPhedrain R, Halangoda K, Sheldon CA, Rintoul GL
Galactose-Replacement Unmasks the Biochemical Consequences of the G11778A Mitochondrial DNA Mutation of LHON in Patient-Derived Fibroblasts.
Exp Cell Res: 2024 May 4;114075
[PubMed:38710404] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Denimal D, Duvillard L, Béland-Bonenfant S, Terriat B, Pais-de-Barros JP, Simoneau I, Rouland A, Houbachi L, Bouillet B, Vergès B, Petit JM
Plasma 16:0 ceramide as a marker of cardiovascular risk estimated by carotid intima-media thickness in people with type 2 diabetes.
Diabetes Metab: 2024 May 4;101542
[PubMed:38710301] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Mohammad SN, Pinto AAG, Silva RAD, Suffredini IB, Tournier AL, Cartwright SJ, Yunes JS, Bonamin LV
Environmental Homeopathy: Homeopathic Potencies Regulate the Growth and Toxicity of Raphidiopsis raciborskii (cyanobacteria) and Can be Tracked Physico-Chemically. Part 2: Physico-chemical Results.
Homeopathy: 2024 May 6;
[PubMed:38710227] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Sanquer H, Heyman J, Hanna K, Le Borgne T
Microscale Chaotic Mixing as a Driver for Chemical Reactions in Porous Media.
Environ Sci Technol: 2024 May 6;
[PubMed:38710098] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

McLean A, Sala RL, Longbottom BW, Carr AR, McCune JA, Lee SF, Scherman OA
Single-Molecule Stoichiometry of Supramolecular Complexes.
J Am Chem Soc: 2024 May 6;
[PubMed:38710014] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Tardelli S, Nizzoli L, Tesconi M, Conti M, Nakov P, Da San Martino G, Cresci S
Temporal dynamics of coordinated online behavior: Stability, archetypes, and influence.
Proc Natl Acad Sci U S A: 2024 May 14, 121(20);e2307038121
[PubMed:38709932] [WorldCat.org: ISSN ESSN ] [DOI] ( o)

Chuey A, Luo Y, Markman EM
Epistemic language in news headlines shapes readers' perceptions of objectivity.
Proc Natl Acad Sci U S A: 2024 May 14, 121(20);e2314091121
[PubMed:38709916] [WorldCat.org: ISSN ESSN ] [DOI] ( o)

Tetik S, Yalçinkaya Alkar Ö
Turkish women's perception of low sexual desire, its causes and consequences: an online qualitative survey.
Sex Health: 2024 May, 21;
[PubMed:38709901] [WorldCat.org: ISSN ESSN ] [DOI] ( p)

Coe A, Abid N, Kaylor-Hughes C
Social media group support for antidepressant deprescribing: a mixed-methods survey of patient experiences.
Aust J Prim Health: 2024 May, 30;
[PubMed:38709900] [WorldCat.org: ISSN ESSN ] [DOI] ( p)

Logullo P, van Zuuren EJ, Winchester CC, Tovey D, Gattrell WT, Price A, Harrison N, Goldman K, Chisholm A, Walters K, Blazey P
ACcurate COnsensus Reporting Document (ACCORD) explanation and elaboration: Guidance and examples to support reporting consensus methods.
PLoS Med: 2024 May 6, 21(5);e1004390
[PubMed:38709851] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Gnade CM, Avery CC, Yang Z, Pickett CM, Oshinowo AE
Social media trends in obstetrics and gynecology residency programs on Instagram and X (Twitter).
PLoS One: 2024, 19(5);e0296930
[PubMed:38709729] [WorldCat.org: ISSN ESSN ] [DOI] ( )

Kim S, Lilani A, Redemptus C, Campana K, Tozan Y
A pre-post evaluation study of a social media-based COVID-19 communication campaign to improve attitudes and behaviors toward COVID-19 vaccination in Tanzania.
PLoS One: 2024, 19(5);e0300206
[PubMed:38709712] [WorldCat.org: ISSN ESSN ] [DOI] ( )

Gras M, Adler P, Smietana M
A Catalytic Approach for the Synthesis of Peptide-Oligonucleotides Conjugates in Aqueous Solution or On-Column.
Chemistry: 2024 May 6;e202401069
[PubMed:38709711] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

LaRosa S, Vanaria RJ, Pham LT, Posner KM, Buontempo MG, Sicco KL, Adotama P
Racial Representation in Melanoma YouTube Videos.
J Drugs Dermatol: 2024 May 1, 23(5);e130-e131
[PubMed:38709687] [WorldCat.org: ISSN ESSN ] [DOI] ( p)

Sharma KK, Somasundaram J, Sachdeva A
Self-Selected Versus Assigned Target to Reduce Smartphone Use and Improve Mental Health: Protocol for a Randomized Controlled Trial.
JMIR Res Protoc: 2024 May 6, 13;e53756
[PubMed:38709546] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Javadi M, Gholami Farashah MS, Roshangar L, Soleimani JR
Plasma-derived extracellular vesicles improve mice embryo development.
Mol Biol Rep: 2024 May 6, 51(1);621
[PubMed:38709430] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Keen F, Bhukya B, Evans LM
Social Media in the Management of Obesity and Diabetes: An Underutilised Population Educational Tool.
Diabetes Ther: 2024 May 6;
[PubMed:38709386] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Alhalafi MH, Rizk SA, Al-Malki ES, Algohary AM
Microwave-ultrasonic assisted extraction of lignin to synthesize new nano micellar organometallic surfactants for refining oily wastewater.
Bioresour Bioprocess: 2024 May 6, 11(1);46
[PubMed:38709379] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Hollborn H, Lachmann C, Strüder D, van Bonn SM, Mlynski R, Schraven SP
Rise in complications of acute otitis media during and after the COVID-19 pandemic.
Eur Arch Otorhinolaryngol: 2024 May 6;
[PubMed:38709319] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Marathe K, Naik J, Maheshwari V
Synthesis, characterisation and in vitro anticancer activity of conjugated protease inhibitor-silver nanoparticles (AgNPs-PI) against human breast MCF-7 and prostate PC-3 cancer cell lines.
Bioprocess Biosyst Eng: 2024 May 6;
[PubMed:38709274] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Lewis JM, Jebeli L, Coulon PML, Lay CE, Scott NE
Glycoproteomic and proteomic analysis of Burkholderia cenocepacia reveals glycosylation events within FliF and MotB are dispensable for motility.
Microbiol Spectr: 2024 May 6;e0034624
[PubMed:38709084] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Cao M, Yang M, Li Y, Yue K, Shen L, Kai L
Cell-free Protein Synthesis System for Building Synthetic Cells.
J Vis Exp: 2024 Apr 19, (206);
[PubMed:38709080] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Gerbi SA
Laboratory Maintenance of the Lower Dipteran Fly Bradysia (Sciara) coprophila: A New/Old Emerging Model Organism.
J Vis Exp: 2024 Apr 19, (206);
[PubMed:38709079] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Poirier S, Jean-Pierre F
Growing a Cystic Fibrosis-Relevant Polymicrobial Biofilm to Probe Community Phenotypes.
J Vis Exp: 2024 Apr 19, (206);
[PubMed:38709077] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Akkuş M, Seyrek Y
Subcostal Specimen Removal in Completely Portal Robotic Lobectomy.
J Vis Exp: 2024 Apr 19, (206);
[PubMed:38709076] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Wang X, Chrzanowski M, Liu Y
Ultrasonic-Assisted Preparation of Biodiesel Products from Vegetable Oils.
J Vis Exp: 2024 Apr 19, (206);
[PubMed:38709074] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Kang B, Hu C, Lin H, Yan H, Wei C, Tang M
Rapid Separation and Display of Active Fibrinogenolytic Agents in Sipunculus nudus through Fibrinogen-Polyacrylamide Gel Electrophoresis.
J Vis Exp: 2024 Apr 19, (206);
[PubMed:38709073] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Lazarus C, Sherman J, Putzel N, Sharkoski T, Zagrodzky W, Kulstad E, Ro A, Nazari J, Fisher W, Metzl M
Determination of Continuity Index Values in Atrial Fibrillation Ablation with Proactive Esophageal Cooling.
J Vis Exp: 2024 Apr 19, (206);
[PubMed:38709062] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Parzianello Egúsquiza MG, Otsuki DA, Costa Auler Junior JO
Ex Vivo Porcine Experimental Model for Studying and Teaching Lung Mechanics.
J Vis Exp: 2024 Apr 19, (206);
[PubMed:38709055] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Huang C, Wang R, Lv J, Zheng N, Wei Z, Wu X, Wang Q, Zhao W
The Adjuvant Efficacy of Angong Niuhuang Pill in the Treatment of Viral Encephalitis: A Meta-Analysis of Randomized Controlled Trials.
J Vis Exp: 2024 Apr 19, (206);
[PubMed:38709054] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Kwananocha I, Verseijden F, Kamali SA, Magré J, Willemsen K, Schouten JC, Salvatori D, Tryfonidou MA, Meij BP
Surgical Technique of the 3-Dimensional-printed Personalized Hip Implant for the Treatment of Canine Hip Dysplasia.
J Vis Exp: 2024 Apr 19, (206);
[PubMed:38709053] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Westemeyer RM, Martens A, Phillips H, Hatfield M, Zimmerman E
Non-Nutritive Suck Parameters Measurements Using a Custom Pressure Transducer System.
J Vis Exp: 2024 Apr 19, (206);
[PubMed:38709051] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Christodoulides A, Hall AR, Umesh A, Alves NJ
Tracking Fibrinolysis of Chandler Loop-Formed Whole Blood Clots Under Shear Flow in An In-Vitro Thrombolysis Model.
J Vis Exp: 2024 Apr 19, (206);
[PubMed:38709048] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Sobolev VS, Arias RS, Massa AN, Walk TE, Orner VA, Lamb MC
Non-destructive SPE-UPLC-based Quantification of Aflatoxins and Stilbenoid Phytoalexins in Single Peanut (Arachis spp.) Seeds.
J Vis Exp: 2024 Apr 19, (206);
[PubMed:38709040] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Ketabforoush A, Wang M, Smith CL, Arnold WD, Nichols NL
Assessing Rat Diaphragm Motor Unit Connectivity Outcome Measures as Quantitative Biomarkers of Phrenic Motor Neuron Degeneration and Compensation.
J Vis Exp: 2024 Apr 19, (206);
[PubMed:38709037] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Bai YZ, Terada Y, Mineura K, Yokoyama Y, Nava RG, Krupnick AS, Gelman AE, Miller MJ, Kreisel D, Li W
Intravital Two-Photon Microscopy of the Transplanted Mouse Lung.
J Vis Exp: 2024 Apr 19, (206);
[PubMed:38709031] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Liu Y, Mao H, Chen S, Wang J, Ouyang W
Modified Mouse Model of Repetitive Mild Traumatic Brain Injury Incorporating Thinned-Skull Window and Fluid Percussion.
J Vis Exp: 2024 Apr 19, (206);
[PubMed:38709029] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Sabri H, Nava P, Barootchi S, Tavelli L, Monje A, Nart J, Wang HL, Saleh MHA
25 years of Clinical Implant Dentistry and Related Research (CIDRR): A modern bibliometric and Altmetrics network analysis.
Clin Implant Dent Relat Res: 2024 May 6;
[PubMed:38708874] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Stoneham M, Coller L, Napolitano J, Scolyer MM, Pollard C
Filling gaps - a case study in building advocacy capacity in the health promotion workforce.
Glob Health Promot: 2024 May 6;17579759241246778
[PubMed:38708854] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

Ramalepa TN, Netangaheni TR
A scoping review of strategies for adolescents' sexual and reproductive health role modelling.
S Afr Fam Pract (2004): 2024 May 3, 66(1);e1-e9
[PubMed:38708753] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Chikanya VK, James S
Development and validation of a job aid: Tool to reduce infections in home-based stroke.
Afr J Prim Health Care Fam Med: 2024 May 6, 16(1);e1-e9
[PubMed:38708728] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Benkaddour NEH, Khalil H, Lekfif A, Abda N, Oneib B, Bentata Y
A psychological insight of Moroccan adults' immunisation behaviour towards emergency vaccines.
Afr J Prim Health Care Fam Med: 2024 May 3, 16(1);e1-e10
[PubMed:38708727] [WorldCat.org: ISSN ESSN ] [DOI] ( e)

Brijnath B, Rao R, Baruah U, Antoniades J, Loganathan S, Varghese M, Cooper C, Kent M, Dow B
Relational solidarity and conflicting ethics in dementia care in urban India.
J Gerontol B Psychol Sci Soc Sci: 2024 May 6;
[PubMed:38708694] [WorldCat.org: ISSN ESSN ] [DOI] ( a)

[Interpreting the evidence. Reducing subjectivity in appraising the evidence calls for a return to teaching evidence-based medicine.].
Recenti Prog Med: 2024 May, 115(5);213-214
[PubMed:38708531] [WorldCat.org: ISSN ESSN ] [DOI] ( p)

Un mese nei tweet
per conoscere, per riflettere, per costruire reti.
Recenti Prog Med: 2024 May, 115(5);210-211
[PubMed:38708530] [WorldCat.org: ISSN ESSN ] [DOI] ( p)

Adachi K, Azakami H, Yamauchi M, Koshoji M, Yamamoto A, Tanaka S
Cyclodextrin-Assisted Surface-Enhanced Photochromic Phenomena of Tungsten(VI) Oxide Nanoparticles for Label-Free Colorimetric Detection of Phenylalanine.
ACS Omega: 2024 Apr 30, 9(17);18957-18972
[PubMed:38708261] [WorldCat.org: ISSN ESSN ] [DOI] ( )

Huang T, Ren X, Chen Y, Ma J, Yi D, Wan Z, Yu B, Zeng W
Transient Combustion Characteristics of Methane-Hydrogen Mixtures in Porous Media Burner.
ACS Omega: 2024 Apr 30, 9(17);19525-19535
[PubMed:38708215] [WorldCat.org: ISSN ESSN ] [DOI] ( )

Ghaitaranpour A, Koocheki A, Mohebbi M
Multi-agent simulation of doughnut deep fat frying considering two domain heating media and sample flipping.
Curr Res Food Sci: 2024, 8;100751
[PubMed:38708098] [WorldCat.org: ISSN ESSN ] [DOI] ( )

Upham F, Lee JH, Park SY
Audience reconstructed: social media interaction by BTS fans during live stream concerts.
Front Psychol: 2024, 15;1214930
[PubMed:38708012] [WorldCat.org: ISSN ESSN ] [DOI] ( )

Gao Y, Liu H, Sun Y
Research on the Evolution Trend of Group Psychological Security Risks Under Public Health Emergencies: Mining and Analysis Based on Social Media Data.
Psychol Res Behav Manag: 2024, 17;1787-1801
[PubMed:38707961] [WorldCat.org: ISSN ESSN ] [DOI] ( )

Cuperus T, Wit B, Castelijn G, Hengeveld P, Opsteegh M, van der Giessen J, Harmanus C, van Prehn J, Kuijper EJ, Smits WK
Clostridioides difficile in calves, cattle and humans from Dutch dairy farms: Predominance of PCR ribotype 695 (clade 5, sequence type 11) in cattle.
One Health: 2024 Jun, 18;100739
[PubMed:38707933] [WorldCat.org: ISSN ESSN ] [DOI] ( )

Ni B, Xiao Y, Wei R, Liu W, Zhu L, Liu Y, Ruan Z, Li J, Wang S, Zhao J, Huang W
Qufeng tongluo decoction decreased proteinuria in diabetic mice by protecting podocytes via promoting autophagy.
J Tradit Complement Med: 2024 May, 14(3);312-320
[PubMed:38707926] [WorldCat.org: ISSN ESSN ] [DOI] ( )

Zhu C, Jiang Y, Lei H, Wang H, Zhang C
The relationship between short-form video use and depression among Chinese adolescents: Examining the mediating roles of need gratification and short-form video addiction.
Heliyon: 2024 May 15, 10(9);e30346
[PubMed:38707427] [WorldCat.org: ISSN ESSN ] [DOI] ( )

James CE, Müller DM, Müller CAH, Van De Looij Y, Altenmüller E, Kliegel M, Van De Ville D, Marie D
Randomized controlled trials of non-pharmacological interventions for healthy seniors: Effects on cognitive decline, brain plasticity and activities of daily living-A 23-year scoping review.
Heliyon: 2024 May 15, 10(9);e26674
[PubMed:38707392] [WorldCat.org: ISSN ESSN ] [DOI] ( )

Hajjaj M, Borodin V, Perțicas DC, Florea AG
Qatar's FIFA World Cup odyssey: A quest for legacy transforming a small nation into a global destination.
Heliyon: 2024 May 15, 10(9);e30282
[PubMed:38707289] [WorldCat.org: ISSN ESSN ] [DOI] ( )

<biblio>

1. Kutalik2008NB pmid=18464786 // PDF
2. Ihmels2004 pmid=15606968 // PDF
3. Ihmels2004a pmid=15044247 // PDF
4. Bergmann2004 pmid=14737187 // PDF
5. Bergmann2003 pmid=12689096 //PDF
6. Ihmels2002 pmid=12134151 // PDF

</biblio>