Previous module | Next module Module #536, TG: 3, TC: 1.8, 39 probes, 39 Entrez genes, 5 conditions

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Expression data for module #536

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Under-expression is coded with green, over-expression with red color.

Help | Hide | Top The GO tree — Biological processes

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metabolic process

The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.

cellular alcohol metabolic process

The chemical reactions and pathways involving alcohols, any of a class of compounds containing one or more hydroxyl groups attached to a saturated carbon atom, as carried out by individual cells.

lipid metabolic process

The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.

steroid biosynthetic process

The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification.

biological_process

Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.

steroid metabolic process

The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus.

lipid biosynthetic process

The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.

biosynthetic process

The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.

cellular process

Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level.

sterol metabolic process

The chemical reactions and pathways involving sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule.

sterol biosynthetic process

The chemical reactions and pathways resulting in the formation of sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule.

cellular metabolic process

The chemical reactions and pathways by which individual cells transform chemical substances.

primary metabolic process

The chemical reactions and pathways involving those compounds which are formed as a part of the normal anabolic and catabolic processes. These processes take place in most, if not all, cells of the organism.

cellular biosynthetic process

The chemical reactions and pathways resulting in the formation of substances, carried out by individual cells.

cellular lipid metabolic process

The chemical reactions and pathways involving lipids, as carried out by individual cells.

all

This term is the most general term possible

cellular metabolic process

The chemical reactions and pathways by which individual cells transform chemical substances.

cellular biosynthetic process

The chemical reactions and pathways resulting in the formation of substances, carried out by individual cells.

steroid metabolic process

The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus.

lipid biosynthetic process

The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.

cellular lipid metabolic process

The chemical reactions and pathways involving lipids, as carried out by individual cells.

steroid biosynthetic process

The chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus; includes de novo formation and steroid interconversion by modification.

sterol metabolic process

The chemical reactions and pathways involving sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule.

sterol biosynthetic process

The chemical reactions and pathways resulting in the formation of sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule.

Help | Hide | Top The GO tree — Cellular Components

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Help | Hide | Top The GO tree — Molecular Function

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Help | Show | Top GO BP test for over-representation

Help | Show | Top GO CC test for over-representation

Help | Show | Top GO MF test for over-representation

Help | Hide | Top KEGG Pathway test for over-representation

Id Pvalue ExpCount Count Size Term
00100 2.184e-03 0.1687 4
23 Biosynthesis of steroids

Help | Hide | Top miRNA test for over-representation

No enriched terms

Help | Hide | Top Chromosome test for over-representation

No enriched terms

Help | Hide | Top Genes

Entrez genes

ADH1Balcohol dehydrogenase 1B (class I), beta polypeptide (209612_s_at), score: -0.82 ANGPTL2angiopoietin-like 2 (213001_at), score: -0.78 ANK2ankyrin 2, neuronal (202920_at), score: -0.79 B3GALT2UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2 (217452_s_at), score: -0.78 C13orf15chromosome 13 open reading frame 15 (218723_s_at), score: -0.8 C4orf18chromosome 4 open reading frame 18 (219872_at), score: -0.73 CCL11chemokine (C-C motif) ligand 11 (210133_at), score: -0.86 CPA3carboxypeptidase A3 (mast cell) (205624_at), score: -0.79 CSTF2cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa (204459_at), score: 0.71 DAAM2dishevelled associated activator of morphogenesis 2 (212793_at), score: -0.8 DAPK1death-associated protein kinase 1 (203139_at), score: -0.87 ECM2extracellular matrix protein 2, female organ and adipocyte specific (206101_at), score: -0.75 ENOX1ecto-NOX disulfide-thiol exchanger 1 (219501_at), score: -0.85 EPHB6EPH receptor B6 (204718_at), score: -0.76 FABP3fatty acid binding protein 3, muscle and heart (mammary-derived growth inhibitor) (214285_at), score: -0.79 FRYfurry homolog (Drosophila) (204072_s_at), score: -0.81 HMGCR3-hydroxy-3-methylglutaryl-Coenzyme A reductase (202540_s_at), score: -0.74 IFIH1interferon induced with helicase C domain 1 (219209_at), score: -0.83 KCNB1potassium voltage-gated channel, Shab-related subfamily, member 1 (211006_s_at), score: -0.9 KCND3potassium voltage-gated channel, Shal-related subfamily, member 3 (213832_at), score: -0.85 LPIN1lipin 1 (212274_at), score: -0.74 LSSlanosterol synthase (2,3-oxidosqualene-lanosterol cyclase) (211019_s_at), score: -0.8 LZTFL1leucine zipper transcription factor-like 1 (218437_s_at), score: -0.78 MAN1C1mannosidase, alpha, class 1C, member 1 (218918_at), score: -0.8 MVDmevalonate (diphospho) decarboxylase (203027_s_at), score: -0.77 MX2myxovirus (influenza virus) resistance 2 (mouse) (204994_at), score: -0.84 OLFML2Aolfactomedin-like 2A (213075_at), score: -0.72 ORAI3ORAI calcium release-activated calcium modulator 3 (221864_at), score: -0.8 PPLperiplakin (203407_at), score: -1 PRKG1protein kinase, cGMP-dependent, type I (207119_at), score: -0.81 PRPS2phosphoribosyl pyrophosphate synthetase 2 (203401_at), score: 0.74 SEMA3Dsema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D (215324_at), score: -0.77 SLC1A3solute carrier family 1 (glial high affinity glutamate transporter), member 3 (202800_at), score: -0.74 SQLEsqualene epoxidase (213562_s_at), score: -0.82 TBC1D8TBC1 domain family, member 8 (with GRAM domain) (204526_s_at), score: -0.82 TNFSF9tumor necrosis factor (ligand) superfamily, member 9 (206907_at), score: -0.72 TNXAtenascin XA pseudogene (213451_x_at), score: -0.73 WNT2wingless-type MMTV integration site family member 2 (205648_at), score: -0.78 XAF1XIAP associated factor 1 (206133_at), score: -0.73

Non-Entrez genes

Unknown, score:

Help | Hide | Top Conditions

Id sample Experiment ExpName Array Syndrome Cell.line
E-TABM-263-raw-cel-1515486291.cel 33 6 Cycle hgu133a2 none Cycle 1
E-TABM-263-raw-cel-1515486271.cel 32 6 Cycle hgu133a2 none Cycle 1
E-TABM-263-raw-cel-1515486331.cel 35 6 Cycle hgu133a2 none Cycle 1
E-TABM-263-raw-cel-1515486231.cel 30 6 Cycle hgu133a2 none Cycle 1
8495_CNTL.CEL 10 8 WBS hgu133plus2 none WBS 1

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