Difference between revisions of "Notebook"

Line 1: Line 1:
 +
== 2016-06-21 ==
 +
*[http://jasonwilder.com/blog/2014/10/13/a-simple-way-to-dockerize-applications/ dockerization]
 +
*TOCSY
 +
**[http://chem.ch.huji.ac.il/nmr/techniques/2d/tocsy/tocsy.html]
 +
 
== 2016-06-19/20 ==
 
== 2016-06-19/20 ==
 
* Metabomatching: feature ''Import Metabolite Associations''
 
* Metabomatching: feature ''Import Metabolite Associations''

Revision as of 11:19, 21 June 2017

2016-06-21

2016-06-19/20

  • Metabomatching: feature Import Metabolite Associations
    • Added a parameter to out file: "kegg_known_x_1"
    • Fixed associated_snips: the tag can be repeated, the keggid must be unique.
    • Read loma into matrix in one go rather than iterating over each line of the file.

2016-06-12/15

Metabolomics: from data to publication

2016-06-07

  • R
    • intro
    • bnlearn R package (journal club)
  • Open-ended brainstorming with Rosanna

2016-06-06

  • Metabomatching: adding feature Import Metabolite Associations
    • done: waiting for code review w/ Rico
  • Bayesian Networks: background reading for journal club

2016-06-02

  • setsid [program] to fork a process
  • Metabomatching: adding feature Import Metabolite Associations
    • creating functions
    • looping through structures

2016-06-01

  • p-values vs. Bayes factors with Marco and Daniele
  • Q-Q plots with Reyhan
  • GIT and matlab
  • "From Bench to Market" @ EPFL