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[[File:timCBG.jpg|200px|thumb|left|Tim Hohm, Postdoc]] | [[File:timCBG.jpg|200px|thumb|left|Tim Hohm, Postdoc]] | ||
| − | Tim Hohm is a postdoc at the [ | + | Tim Hohm is a postdoc at the [[Main_Page|''Computational Biology Group'']] in the [http://www.unil.ch/dgm Department of Medical Genetics] at the [http://www.unil.ch University of Lausanne]. He received his PhD from [http://www.ethz.ch ETH Zurich] in 2009, developing techniques for parameter estimation on gene regulative networks for multi-cell systems. He is now involved in the [http://www.systemsx.ch/index.php?id=150 Plant Growth] project from [http://www.Systemsx.ch SystemsX.ch], investigating gene regulative networks responsible for [[Phototropism_in_Arabidopsis|phototropism in ''Arabidopsis thaliana'']]. |
Revision as of 17:14, 21 April 2010
Tim Hohm is a postdoc at the Computational Biology Group in the Department of Medical Genetics at the University of Lausanne. He received his PhD from ETH Zurich in 2009, developing techniques for parameter estimation on gene regulative networks for multi-cell systems. He is now involved in the Plant Growth project from SystemsX.ch, investigating gene regulative networks responsible for phototropism in Arabidopsis thaliana.
Contact Details
- address: Rue de Bugnon 27 - DGM 113 - CH-1005 Lausanne - Switzerland
- email: tim.hohm at unil.ch
- phone: +41 - 21 - 692 - 52 46
Publications
- T. Hohm, E. Zitzler, and R. Simon. A Dynamic Model for Stem Cell Homeostasis and Patterning in Arabidopsis Meristems. PLoS ONE, 5(2):e9189, 2010. doi
- M. Woehrle, D. Brockhoff, T. Hohm, and S. Bleuler. Investigating Coverage and Connectivity Trade-offs in Wireless Sensor Networks: The Benefits of MOEAs. In M. Ehrgott et al., editors, Multiple Criteria Decision Making for Sustainable Energy and Transportation Systems (MCDM 2008), volume 634 of LNEMS, pages 211–221, Heidelberg, Germany, 2010. Springer. doi
- T. Hohm and E. Zitzler. A Multiobjective Evolutionary Algorithm for Numerical Parameter Space Characterization of Reaction Diffusion Systems. In V. Kadirkamanathan et al., editors, International Conference on Pattern Recognition in Bioinformatics (PRIB 2009), volume 5780 of LNBI, pages 162–174, Heidelberg, Germany, 2009. Springer. doi
- T. Hohm and E. Zitzler. Multicellular Pattern Formation: Parameter Estimation for ODE-based Gene Regulatory Network Models. IEEE Eng Med Biol, 28(4):52–57, 2009. doi
- T. Hohm and E. Zitzler. Multiobjectivization for parameter estimation: a case-study on the segment polarity network of drosophila. In F. Rothlauf et al., editors, GECCO '09: Genetic and Evolutionary Computation Conference (GECCO 2009), pages 209–216, New York, NY, USA, 2009. ACM. doi
- T. Hohm, M. Egli, S. Gaehwiler, S. Bleuler, J. Feller, D. Frick, R. Huber, M. Karlsson, R. Lingenhag, T. Ruetimann, T. Sasse, T. Steiner, J. Stocker, and E. Zitzler. An Evolutionary Algorithm for the Block Stacking Problem. In N. Monmarché et al., editors, Evolution Artificielle 2007, volume 4926 of LNCS, pages 111–122, Berlin, Germany, 2008. Springer. doi
- W. Gronwald, T. Hohm, and D. Hoffmann. Evolutionary Pareto-optimization of stably folding peptides. BMC Bioinformatics, 9(109), 2008. doi
- T. Hohm and E. Zitzler. Modeling the Shoot Apical Meristem in A. thaliana: Parameter Estimation for Spatial Pattern Formation. In Elena Marchiori, Jason H. Moore, and Jagath C. Rajapakse, editors, Evolutionary Computation, Machine Learning and Data Mining in Bioinformatics (evoBIO 2007), volume 4447 of LNCS, pages 102–113. Springer, 2007. doi
- T. Hohm, P.Limbourg, and D. Hoffmann. A Multiobjective Evolutionary Method for the Design of Peptide Mimotopes. Journal of Computational Biology, 13(1):113–125, 2006. doi
- T. Hohm and D. Hoffmann. A multi-objective evolutionary approach to peptide structure redesign and stabilization. In H.-G. Beyer and U.-M. O'Reilly, editors, Genetic and Evolutionary Computation Conference (GECCO 2005), pages 423–429, New York, NY, USA, 2005. ACM Press. doi
