Difference between revisions of "People"
 
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Line 12: Line 12:
 
|04/05-
 
|04/05-
 
|-
 
|-
−
|'''[[User:Diana|Diana Marek]]''' (Postdoc)
+
|'''[[User:Daniel | Daniel Krefl]]''' (Postdoc)
−
|53 91
+
| 54 56
−
|Pharmacogenetics study of Swiss HIV cohort data
+
| Metabolomics
−
|10/05-
+
|03/19-
 
|-
 
|-
−
|'''[[User:Zoltan|Zoltán Kutalik]]''' (Maitre Assistant)
+
|'''[[User:Michael | Michael Beyeler]]''' (Ph.D. Student)
−
|54 63
+
| 54 56
−
|Genome-wide association studies
+
| Imaging genomics
−
|05/06-
+
|04/20-
−
|-
 
−
|'''[[User:Micha|Micha Hersch]]''' (Postdoc)
 
−
|52 46
 
−
|Plant Growth in a Changing Environment
 
−
|10/08-
 
−
|-
 
−
|'''[[User:Barbara|Barbara Piasecka]]''' (Candoc, joint with Prof. Marc Robinson-Rechavi)
 
−
|54 63 or 42 21
 
−
|Comparative modular analysis of gene expression in vertebrate development
 
−
|10/08-
 
 
|-
 
|-
−
|'''[[User:Sascha|Sascha Dalessi]]''' (Postdoc)
+
|'''[[User:Sofia | Sofia Ortin Vela]]''' (Ph.D. Student)
−
|54 01
+
| 54 56
−
|Modeling of patterning processes in Drosophila development
+
|  
−
|01/09-
+
|11/20-
−
|-
 
−
|'''[[User:Tim|Tim Hohm]]''' (Postdoc)
 
−
|52 46
 
−
|Modeling gene regulative networks responsible for light-responses in plants
 
−
|01/10-
 
−
|-
 
−
|'''[[User:Rico|Rico Rueedi]]''' (Postdoc)
 
−
|54 02
 
−
|Metabolomics
 
−
|05/10-
 
 
|-
 
|-
−
|'''[[User:Nadya|Nadya Monina]]''' (Postdoc)
+
|'''[[User:Olga | Olga Trofimova]]''' (Postdoc)
−
|53 78
+
| 54 56
−
|Laboratory evolution of E coli and Staphylococcus aureus
+
| Imaging genomics
−
|04/11-
+
|03/22-
 
|-
 
|-
−
|'''[[User:Andrea|Andrea Prunotto]]''' (Postdoc)
+
|'''[[User:Ilaria | Ilaria Iuliani]]''' (Postdoc)
−
|53 91
+
| 54 56
−
|Analysis of large-scale biomedical data
+
|  
−
|04/11-
+
|02/23-
 
|-
 
|-
−
|'''[[User:Tanguy|Tanguy Corre]]''' (Postdoc)
+
|'''[[User:DavidPresby | David Presby]]''' (Postdoc)
−
|53 91
+
| 54 56
−
|Analysis of large-scale biomedical data
+
|  
−
|05/11-
+
|06/23-
 
|}
 
|}
  
Line 73: Line 53:
 
!Projects
 
!Projects
 
!Present
 
!Present
 +
|-
 +
|'''[[User:Anneke | Anneke Brümmer]]''' (Postdoc)
 +
| Codon usage
 +
|05/18-04/23
 +
|-
 +
|'''[[User:Alex | Alexander Luke Button]]''' (Postdoc)
 +
| Deep learning on fundus images
 +
|11/20-04/22
 +
|-
 +
|'''[[User:Micha|Micha Hersch]]''' (Senior Reseacher)
 +
| Computational modeling of biological processes
 +
|10/08-07/22
 +
|-
 +
|'''[[User:Mattia | Mattia Tomasoni]]''' (PhD student)
 +
| Metabolomics
 +
|05/17-02/21
 +
|-
 +
|'''[[User:Tanguy|Tanguy Corre]]''' (Postdoc)
 +
|Genome-wide Association Analyses
 +
|05/11-01/15
 +
|-
 +
|'''[[User:Reyhan|Reyhan Sönmez]]''' (PhD student)
 +
|Genome-wide association analysis on RNA-Seq data
 +
|08/14-07/20
 +
|-
 +
|'''[[User:Bita | Bita Khalili]]''' (Postdoc)
 +
|  Metabolomics
 +
|03/18-04/20
 +
|-
 +
|'''[[User:Sarvenaz|Sarvenaz Choobdar]]''' (Postdoc)
 +
| Biological network study
 +
|06/15-01/19
 +
|-
 +
|'''[[User:Mirjam | Mirjam Mattei]]''' (Master student)
 +
| Metabolomics
 +
|11/16-08/18
 +
|-
 +
|'''[[User:Tugce | Tugce Bilgin Sonay]]''' (Postdoc)
 +
| Long non-coding RNA
 +
|04/17-08/18
 +
|-
 +
|'''[[User:Rico|Rico Rueedi]]''' (Postdoc)
 +
|Metabolomics
 +
|05/10-08/18
 +
|-
 +
|'''[[User:DanielMarbach|Daniel Marbach]]''' (Postdoc)
 +
|Network-based interpretation of genetic variants
 +
|08/13-11/17
 +
|-
 +
|'''[[User:Roger|Roger Mallol Parera]]''' (Postdoc)
 +
| Metabolomics
 +
|09/15-09/17
 +
|-
 +
|'''[[User:AndreasKaufmann | Andreas Kaufmann]]''' (Research assistant)
 +
| Phenotypic robustness and gender
 +
|10/16- 5/17
 +
|-
 +
|'''[[User:David|David Lamparter]]''' (PhD student)
 +
|Data integration for Genome-wide Association Analyses
 +
|05/11-06/16
 +
|-
 +
|'''Katarina Cisarova''' (Master student)
 +
| Cardio-vascular genetic risk factor related analysis of gene expression.
 +
|01/15-07/15
 +
|-
 +
|'''[[User:Andrea|Andrea Prunotto]]''' (Postdoc)
 +
|Analysis of large-scale biomedical data
 +
|04/11-12/14
 +
|-
 +
|'''[[User:Charlotte|Charlotte Hor]]''' (Visiting postdoc)
 +
|
 +
|05/14-12/14
 +
|-
 +
|'''[[User:Sascha.Dalessi|Sascha Dalessi]]''' (Postdoc)
 +
|Modeling of patterning processes in Drosophila development
 +
|01/09-12/13
 +
|-
 +
|'''Tania Ngo''' (intern)
 +
|Trhr and blood pressure drug response in mice
 +
|08/13-11/13
 +
|-
 +
|'''[[User:Tim|Tim Hohm]]''' (Postdoc)
 +
|Modeling gene regulative networks responsible for light-responses in plants
 +
|01/10-06/13
 +
|-
 +
|'''[[User:Nadya|Nadya Monina]]''' (Postdoc)
 +
|Laboratory evolution of E coli and Staphylococcus aureus
 +
|04/11-06/13
 +
|-
 +
|'''[[User:Diana|Diana Marek]]''' (PhD student, then Postdoc)
 +
|Pharmacogenetics study of Swiss HIV cohort data
 +
Analysis of large-scale clinical and genetic data
 +
|10/05-03/13
 +
|-
 +
|'''[[User:Barbara|Barbara Piasecka]]''' (PhD student, joint with Prof. Marc Robinson-Rechavi)
 +
|Comparative modular analysis of gene expression in vertebrate development
 +
|10/08-03/13
 +
|-
 +
|'''[[User:Aitana|Aitana Morton de Lachapelle]]''' (PhD student)
 +
|Modeling of patterning processes in Drosophila development
 +
|02/07-9/11
 
|-
 
|-
 
|'''[[User:Bastian|Bastian Peter]]''' (Postdoc)
 
|'''[[User:Bastian|Bastian Peter]]''' (Postdoc)
 +
 
|Modular analysis of clinical microarray data
 
|Modular analysis of clinical microarray data
 
|03/06-03/11
 
|03/06-03/11
 
|-
 
|-
−
|'''Alain Sewer''' (Postdoc)
+
|'''[[User:Gabor|Gábor Csárdi]]''' (Postdoc)
−
|Human microRNA analysis using microarray data
+
|Analysis of EuroDia data
−
|07/06-12/08
+
|01/08-03/11
 
|-
 
|-
−
|'''[[User:Toby|Toby Johnson]]''' (Postdoc, joint with Prof. Murielle Bochud)
+
|'''[http://www3.unil.ch/wpmu/sgg/zoltan/ Zoltán Kutalik]''' (Postdoc)
−
|Analysis of CoLaus data
+
|Genome-wide association studies
−
|05/07-04/09
+
|05/06-2/11
−
|-
 
−
|'''[[User:Andreas|Andreas Lüscher]]''' (Postdoc/Programmer)
 
−
|Development of module visualization and analysis tools
 
−
|09/09-12/09
 
 
|-
 
|-
−
|'''[[User:Armand|Armand Valsesia]]''' (Candoc, joint with Prof. Victor Jongeneel)
+
|'''[[User:Armand|Armand Valsesia]]''' (PhD student, joint with Prof. Victor Jongeneel)
 
|CNV analysis
 
|CNV analysis
 
|07/07-02/11
 
|07/07-02/11
−
|-
 
−
|'''[[User:Gabor|Gábor Csárdi]]''' (Postdoc)
 
−
|Analysis of EuroDia data
 
−
|01/08-03/11
 
 
|-
 
|-
 
|'''[[User:Karen|Karen Kapur]]''' (Postdoc)
 
|'''[[User:Karen|Karen Kapur]]''' (Postdoc)
Line 102: Line 176:
 
|10/08-02/11
 
|10/08-02/11
 
|-
 
|-
−
|'''[[User:Aitana|Aitana Morton de Lachapelle]]''' (Candoc)
+
|'''[[User:Andreas|Andreas Lüscher]]''' (Postdoc/Programmer)
−
|Modeling of patterning processes in Drosophila development
+
|Development of module visualization and analysis tools
−
|02/07-9/11
+
|09/09-12/09
 +
|-
 +
|'''[[User:Toby|Toby Johnson]]''' (Postdoc, joint with Prof. Murielle Bochud)
 +
|Analysis of CoLaus data
 +
|05/07-04/09
 +
|-
 +
|'''Alain Sewer''' (Postdoc)
 +
|Human microRNA analysis using microarray data
 +
|07/06-12/08
 +
|-
 
|}
 
|}

Latest revision as of 20:59, 1 June 2023


Name Telephone Current Projects Present
Sven Bergmann (Principal Investigator) 54 52 Computational analyses of biological systems 04/05-
Daniel Krefl (Postdoc) 54 56 Metabolomics 03/19-
Michael Beyeler (Ph.D. Student) 54 56 Imaging genomics 04/20-
Sofia Ortin Vela (Ph.D. Student) 54 56 11/20-
Olga Trofimova (Postdoc) 54 56 Imaging genomics 03/22-
Ilaria Iuliani (Postdoc) 54 56 02/23-
David Presby (Postdoc) 54 56 06/23-


from outside dial +41 (0) 21 692 [extension]
e-mail addresses: [first name].[last name without spaces]@unil.ch

Former Group Members

Name Projects Present
Anneke Brümmer (Postdoc) Codon usage 05/18-04/23
Alexander Luke Button (Postdoc) Deep learning on fundus images 11/20-04/22
Micha Hersch (Senior Reseacher) Computational modeling of biological processes 10/08-07/22
Mattia Tomasoni (PhD student) Metabolomics 05/17-02/21
Tanguy Corre (Postdoc) Genome-wide Association Analyses 05/11-01/15
Reyhan Sönmez (PhD student) Genome-wide association analysis on RNA-Seq data 08/14-07/20
Bita Khalili (Postdoc) Metabolomics 03/18-04/20
Sarvenaz Choobdar (Postdoc) Biological network study 06/15-01/19
Mirjam Mattei (Master student) Metabolomics 11/16-08/18
Tugce Bilgin Sonay (Postdoc) Long non-coding RNA 04/17-08/18
Rico Rueedi (Postdoc) Metabolomics 05/10-08/18
Daniel Marbach (Postdoc) Network-based interpretation of genetic variants 08/13-11/17
Roger Mallol Parera (Postdoc) Metabolomics 09/15-09/17
Andreas Kaufmann (Research assistant) Phenotypic robustness and gender 10/16- 5/17
David Lamparter (PhD student) Data integration for Genome-wide Association Analyses 05/11-06/16
Katarina Cisarova (Master student) Cardio-vascular genetic risk factor related analysis of gene expression. 01/15-07/15
Andrea Prunotto (Postdoc) Analysis of large-scale biomedical data 04/11-12/14
Charlotte Hor (Visiting postdoc) 05/14-12/14
Sascha Dalessi (Postdoc) Modeling of patterning processes in Drosophila development 01/09-12/13
Tania Ngo (intern) Trhr and blood pressure drug response in mice 08/13-11/13
Tim Hohm (Postdoc) Modeling gene regulative networks responsible for light-responses in plants 01/10-06/13
Nadya Monina (Postdoc) Laboratory evolution of E coli and Staphylococcus aureus 04/11-06/13
Diana Marek (PhD student, then Postdoc) Pharmacogenetics study of Swiss HIV cohort data

Analysis of large-scale clinical and genetic data

10/05-03/13
Barbara Piasecka (PhD student, joint with Prof. Marc Robinson-Rechavi) Comparative modular analysis of gene expression in vertebrate development 10/08-03/13
Aitana Morton de Lachapelle (PhD student) Modeling of patterning processes in Drosophila development 02/07-9/11
Bastian Peter (Postdoc) Modular analysis of clinical microarray data 03/06-03/11
Gábor Csárdi (Postdoc) Analysis of EuroDia data 01/08-03/11
Zoltán Kutalik (Postdoc) Genome-wide association studies 05/06-2/11
Armand Valsesia (PhD student, joint with Prof. Victor Jongeneel) CNV analysis 07/07-02/11
Karen Kapur (Postdoc) Integrative Analysis of Genetic Interactions 10/08-02/11
Andreas Lüscher (Postdoc/Programmer) Development of module visualization and analysis tools 09/09-12/09
Toby Johnson (Postdoc, joint with Prof. Murielle Bochud) Analysis of CoLaus data 05/07-04/09
Alain Sewer (Postdoc) Human microRNA analysis using microarray data 07/06-12/08
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