Difference between revisions of "UNIL BSc course: Bioinformatics for Genomics 2021"
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** 14 April 2021, 11:00-12:00: Final Session: "Wrap-up & feedback" (all)
 
** 14 April 2021, 11:00-12:00: Final Session: "Wrap-up & feedback" (all)
  
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On 29/30 March we present the core material of this course. We will distribute simple exercises based on the tutorials. Groups of 3 students have to send their answers to us before noon on April 12 and discuss them with the tutors in 15' slots running from 14:00 to 16:00 on that day. Additional feedback on these exercises will be given in the Final Session on April 14 starting at 11:00.
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On 29/30 March we present the core material of this course. We will distribute simple exercises based on the tutorials. Groups of 3 students have to send their answers to us before noon on April 12 and discuss them with the tutors in 15' slots running from 14:00 to 18:00 on that day. Additional feedback on these exercises will be given in the Final Session on April 14 starting at 11:00.
  
 
This semester all lectures and tutorial will be given online. If the situation allows we may do the individual sessions on site.
 
This semester all lectures and tutorial will be given online. If the situation allows we may do the individual sessions on site.

Revision as of 13:13, 18 March 2021

  • Course aims:
    • Get to know some of the the bioinformatics methods necessary for genomic analysis
    • Use these methods on simple real cases
    • Develop an understanding of potential pitfalls and the impact of bioinformatics choices in genomic results
  • Prerequisites:
    • Notions of genomics (gene, genome, transcriptome)
    • Basic statistics (what is a test, a p-value)
    • Basic literacy in R and/or Python.
  • Schedule
    • 29 March 2021, 08:00-9:15: Lecture 1: "RNA-seq & DE" (Sven)
    • 29 March 2021, 09:30-10:30: Tutorial 1: "RNA-seq & DE" (Anneke)
    • 29 March 2021, 10:45-12:00: Lecture 2: "Clustering" (Sven)
    • 30 March 2021, 08:00-9:00: Tutorial 2: "Clustering" (Alex)
    • 30 March 2021, 09:15-10:45: Lecture 3: "More seq-data" (Sven)
    • 30 March 2021, 11:00-12:00: Tutorial 3: "More seq-data" (Daniel)
    • 12 April 2021, 14:00-18:00: "Individual 15' sessions with groups of 3 students"
    • 13 April 2021, 09:00-10:30: Lecture 4: "Biological Networks" (Sven)
    • 13 April 2021, 11:00-12:00: Tutorial 4: "Biological Networks" (Daniel)
    • 14 April 2021, 09:00-10:30: Lecture 5: "Advanced clustering" (Sven)
    • 14 April 2021, 11:00-12:00: Final Session: "Wrap-up & feedback" (all)

On 29/30 March we present the core material of this course. We will distribute simple exercises based on the tutorials. Groups of 3 students have to send their answers to us before noon on April 12 and discuss them with the tutors in 15' slots running from 14:00 to 18:00 on that day. Additional feedback on these exercises will be given in the Final Session on April 14 starting at 11:00.

This semester all lectures and tutorial will be given online. If the situation allows we may do the individual sessions on site.

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