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- "stam"
- A genome-wide association study of human urine metabolome
- A new "test page"
- Aitana Morton de Lachapelle
- Analyisis of RNAseq data
- Analysis of Retina Images from the UK BioBank and yourself
- Analysis of cell type and tissue-specific regulatory networks
- Application of Wright-Fisher for recombination landscapes
- Application of Wright-Fisher model for recombination landscapes
- Assessing the impact of alterations dependences on patient survival in cancer
- Automated Pupil Data Recosntruction using DL
- Bacterial cross-resistance
- Bacterial growth
- Bias in de novo germline mutation rates
- BioMathProject2016 Identification of disease associated pseudogenes
- BioMathProject2016 Investigating gene expression across the cell cycle using single-cell RNA-seq data
- BioMathProject2016 The Facebook of genes: expanding known pathways using network information
- BioMathProject2016 expanding known pathways using network information
- CIG-DGM joint seminar: "Genome-wide Association Studies"
- Calcium Meta-Analysis
- Can environment modify genetic effects on human anthropometric traits?
- Can environmental factors modify the effect of genes influencing blood pressure?
- Can we find disease fingerprints in our metabolome?
- Cancer Genes: How are they normally expressed?
- Cellophane
- Classify Rab proteins (GTPases) using ML approach
- Collective motions of animals
- Computational Biology Group Wiki:About
- Concept
- Conferences
- Contact
- Control of mitosis in fission yeast
- Course: "Cartographie, séquençage et structure des génomes 2008"
- Course: "Solving Biological Problems that require Math"
- Course idea and teaching goals of Case studies in Bioinformatics
- Course idea and teaching goals of Forensics in Bioinformatics
- Current dynamics of the Lausanne population genetics
- Daniel
- Daniel Marbach
- Dates & Deadlines
- Dates & Deadlines 2009
- Dates & Deadlines 2010
- Dates & Deadlines 2011
- Dates & Deadlines 2012
- Dates & Deadlines 2013
- Dates & Deadlines 2014
- Dates & Deadlines 2015
- Dates & Deadlines 2016
- Dates & Deadlines 2017
- Dates & Deadlines 2018
- Dates & Deadlines 2019
- Dates and Deadlines 2019
- Dates and Deadlines 2020
- Dates and Deadlines 2021
- Dates and Deadlines 2022
- Dates and Deadlines 2023
- Dates and Deadlines 2024
- Discordance analysis
- Discordance of LDL-C with ApoB and the presence of cardiovascular disease
- Discordance of LDL-C with ApoB and the presence of coronary artery disease
- Discovery of phenotypes influenced by the season of birth
- Docker
- EISA and the biclust package
- EISA module trees
- EISA tutorial
- EPFL doctoral course: "Functional Genomics 2009"
- EPFL doctoral course: "Functional Genomics 2010"
- EPFL doctoral course: "Functional Genomics 2011"
- EPFL doctoral course: "Functional Genomics 2012"
- EV format
- EV ordering
- EV tutorial
- EddiMckinzie551
- Ensemble pathway discovery
- Estimating selection pressure on different genomic regions
- Estimating speciation and extinction rates in a tropical plant
- Evolution: Estimating rate of speciation and extinction in a tropical plant
- Evolution of Gene Expression Levels in Mammalian Organs
- Evolution of polymorphism in plants
- Evolution of seed size in relation to dispersal agent
- ExpressionView
- ExpressionView Application Note
- ExpressionView File Format
- Expression studies
- Extracting medically relevant features from the human retina
- Feature Requests
- Final report meeting
- Final report meeting 2010
- Final report meeting 2012
- Final report meeting 2013
- Final report meeting 2019
- Finding a clinically relevant measure of obesity
- GIANT height
- GMM
- GWAS project
- Gender bias in neurodevelopmental disorders
- Gene Expression Signatures 101 - The PAM50 gene expression signature
- Genes reflect geography
- Genetic determinants of eating patterns
- Genetic modulation of transcriptional processes
- Genetics of allostatic load in the CoLaus study
- Genetics of different body mass measurements
- Genetics of eating patterns
- Genetics of liver enzymes levels
- Genetics of urinary calcium levels
- Genome-wide association studies on various clinical phenotypes
- Genome Wide Association Studies
- Genomic studies: databases and tools
- Genomic studies: exercises
- Genomic studies: theory
- Getting started with ExpressionView
- Golden rules for a good CV
- Golden rules for a good presentation
- Grading
- Group Meeting
- Guidelines for a successful stay at the CBG
- HMM based classification for conserved SNARE protein domains
- Heritability of BMI
- History
- How genetic alterations propagate to organismal level traits
- How genetic alterations propagate to organismal level traits?
- How to upload files and edit your project page
- How well does sequence similarity predict similarity in binding specificity?
- Human metabolic correlates of cardiovascular risk factors
- Hypergenes Study
- HypoPhen
- I:CBGWiki:About
- I:WikiIssues
- ICP software
- ISA
- ISA internals
- ISA tutorial
- Identification of cell cycle-relevant gene modules in single-cell RNA-seq data
- Identification of obesity and BMI associated intergenic long noncoding RNAs
- Identifying genes and pathways that modulate multiple traits
- Ilaria
- Inference of Overall Heritability Captured by GWA-Data
- Integrative Analysis
- Intermediate report meeting
- Intermediate report meeting 2010
- Intermediate report meeting 2011
- Intermediate report meeting 2012
- Internal
- Introduction to dynamical systems and differential equations
- Jacques Beckmann
- Johann Weber
- Journal Club
- Journal Club (2014-2015)
- Journal Club (Autumn 2018)
- Journal Club (Spring 2017)
- Journal Club (Spring 2018)
- Journal Club (autumn 2013)
- Journal Club (autumn 2015)
- Journal Club (autumn 2016)
- Journal Club (autumn 2017)
- Journal Club (spring 2012)
- Journal Club (spring 2013)
- Journal Club (spring 2014)
- Journal Club (spring 2016)
- Kinematics of seedling elongation
- Lab mouse phylogeny
- Library
- Literature seminar: "Systematic interpretation of genetic interactions using protein networks"
- Literature seminars for first-year PhD UNIL students (3/11/08, 12:15-14:00, Room 219 at Bugnon 27) on "Systematic interpretation of genetic interactions using protein networks"
- Long Range Dpp Gradient Formation
- Main Page
- Map of Europe
- Mapofeurope
- Metabolome
- Metabolomics
- Metabolomics— Linking Genotype and Phenotype
- Metabomatching
- Michael
- Microarray data analysis of the shade avoidance in plants
- Mitose cellulaire dans les levures: étude des effets géométriques sur la formation du gradient de Pom1
- Modeling: Pattern formation using Reaction-Diffusion models
- Modeling: Spread of epidemics
- Modeling gradient formation in the fission yeast
- Modeling microbial ecosystem stability through metabolite leakage
- Modeling morphogen gradient formation
- Modeling of gradient formation in "Drosophila" embryos
- Modelling pathways crosstalks as closed walks and cycles on graphs
- Module 1: Is the hourglass model for gene expression really supported by the data?
- Module 2: How to normalize metabolomics data: z-scores or creatinine as reference?
- Module 2: How well does sequence similarity predict similarity in binding specificity?
- Module 2: Metabolome-wide genome-wide association study
- Module 3: How do our expectations confound the results of our analyses?
- Module 3: How to make valid prognostic models with gene expression signatures?
- Module 3: Mauro's project
- Module 4: How do "our expectations" confound the results of our analyses?
- Module 4: How does feature selection impact integrative clustering analysis?
- Molecular constraints of the Major histocompatibility complex I (MHC I) protein
- Morphogenèse: modélisation de la formation de gradients de diffusion
- Murielle Bochud
- NOFIA
- Narcolepsy
- Neuroenergetics: Importance of transport for the regulation of energy substrate fluxes in brain cells
- Neuroenergetics: Modeling of brain cell metabolic phenotypes
- News
- Nicolas/Anna: TBA
- Notebook
- Olga
- Optic disk
- Optical disk
- Optimizing gene scores for pathway enrichment
- Ordering algorithm used in ExpressionView
- Other BioC packages
- Packaging matlab to standalone
- Pascal
- PascalTestData
- PascalX application: Marrying GWAS pairs
- Pathway Analyisis of GWAS data
- Pathway enrichment in DNAse1 footprinting data
- People
- Phototropism in Arabidopsis
- Pictures
- PojectYeast
- Polygenic Risk Scores
- Positions
- Predicting Blood Pressure from the retina using Deep Learning
- Prioritizing genes via network enrichment
- ProjectYeast
- Project name
- Publications
- QuickTest
- RETINA
- Regulatory Circuits
- Regulatory network of the shade avoidance
- Retina Image Analysis
- Retinal properties & disease
- Retinal vasculature
- Robust gradient formation
- Robust inference of gene regulatory networks using bootstrapping
- Robustness in Drosophila embryo patterning
- Running ISA in parallel
- SIB Young Bioinformatician award 2010
- SIB course: "Statistical analysis applied to genome and proteome analyses"
- SIB course on “Statistical genomics and statistical genetics”
- SIB winter-school on “Clinical Bioinformatics”
- SNP minor allele frequencies and their functional implication
- SPSW 2012 summer school exercise session
- Sandbox
- Sandbox2
- Sbprm2023 optical disk
- Schedule for Biology for non-biologists 2018
- Schedule for Biology for non-biologists 2019
- Schedule for Case studies in Bioinformatics 2015
- Schedule for Case studies in Bioinformatics 2016
- Schedule for Case studies in Bioinformatics 2017
- Schedule for Case studies in Bioinformatics 2018
- Schedule for Case studies in Bioinformatics 2019
- Schedule for Case studies in Bioinformatics 2020
- Schedule for Forensics in Bioinformatics 2015
- Science
- Sex differences in retinal vascular properties
- Sofia
- Software
- Speciation and extinction rate estimation using phylogenetic trees
- Statistics of cell size determination in fission yeast
- Statistics of cell size determination in fission yeast - pom1 and cdr2
- Statistics of cell size determination in fission yeast - the pom1 gradient
- Stress management in Yeast
- Summer school course: "Biologie und Medizin im digitalen Zeitalter: Jenseits der Disziplinen"
- Summerschool of the Max-Weber Stiftung
- Sven Bergmann
- SystemsX.ch/SIB summer-school ”From Data to Models in Biological Systems”
- Teaching
- TestMaiaKaplan
- The Library
- The evolution of beauty
- The facebook of genes: community detection in biological networks
- Tissue specific expression with the Iterative Signature Algorithm
- Top-bottom differences in retinal vascular properties
- Total Explained Variance
- Tracking substitution rate through simulation in a Wright-Fisher model
- Tree of Life: Inferring species phylogenies based on entire proteomes
- UHTS
- UNIL BSc course: "Bioinformatics for Genomics"
- UNIL BSc course: "Experimental design"
- UNIL BSc course: "Experimental design 2009"
- UNIL BSc course: "Experimental design 2010"
- UNIL BSc course: "GGE course module on Genome-wide association studies"
- UNIL BSc course: "Solving Biological Problems that require Math"
- UNIL BSc course: "Solving Biological Problems that require Math 2009"
- UNIL BSc course: "Solving Biological Problems that require Math 2010"
- UNIL BSc course: "Solving Biological Problems that require Math 2011"
- UNIL BSc course: "Solving Biological Problems that require Math 2012"
- UNIL BSc course: "Solving Biological Problems that require Math 2013"
- UNIL BSc course: "Solving Biological Problems that require Math 2014"
- UNIL BSc course: "Solving Biological Problems that require Math 2015"
- UNIL BSc course: "Solving Biological Problems that require Math 2016"
- UNIL BSc course: "Solving Biological Problems that require Math 2017"
- UNIL BSc course: "Solving Biological Problems that require Math 2018"
- UNIL BSc course: "Solving Biological Problems that require Math 2019"
- UNIL BSc course: 'Solving Biological Problems that require Math 2019'
- UNIL BSc course: Bioinformatics Projects 2024
- UNIL BSc course: Bioinformatics for Genomics 2020
- UNIL BSc course: Bioinformatics for Genomics 2021
- UNIL BSc course: Bioinformatics for Genomics 2022
- UNIL BSc course: Bioinformatics for Genomics 2023
- UNIL BSc course: Bioinformatics for Genomics 2024
- UNIL BSc course: Solving Biological Problems that require Math 2018
- UNIL BSc course: Solving Biological Problems that require Math 2019
- UNIL BSc course: Solving Biological Problems that require Math 2020
- UNIL BSc course: Solving Biological Problems that require Math 2021
- UNIL BSc course: Solving Biological Problems that require Math 2022
- UNIL BSc course: Solving Biological Problems that require Math 2023
- UNIL BSc course: Solving Biological Problems that require Math 2024
- UNIL Bachelor course: "Solving Biological Problems that require Math"
- UNIL Biomedical Master: "Metabolic diseases"
- UNIL Biomedical Master: "Metabolic diseases 2010"
- UNIL Biomedical Master: "Metabolic diseases 2011"
- UNIL MSc course: "Cartographie, séquençage et structure des génomes 2007"
- UNIL MSc course: "Cartographie, séquençage et structure des génomes 2008"
- UNIL MSc course: "Case studies in bioinformatics"
- UNIL MSc course: "Case studies in bioinformatics 2015"
- UNIL MSc course: "Case studies in bioinformatics 2016"
- UNIL MSc course: "Case studies in bioinformatics 2017"
- UNIL MSc course: "Case studies in bioinformatics 2018"
- UNIL MSc course: "Case studies in bioinformatics 2019"
- UNIL MSc course: "Forensics in Bioinformatics 2015"
- UNIL MSc course: "Genes: from sequence to function 2009"
- UNIL MSc course: Case studies in bioinformatics 2018
- UNIL MSc course: Case studies in bioinformatics 2019
- UNIL MSc course: Case studies in bioinformatics 2020
- UNIL MSc course: Data Analysis I 2020
- UNIL MSc course: Data Analysis I 2021
- UNIL MSc course: Data Analysis I 2023
- UNIL MSc course: Data Analysis I 2024
- UNIL Masters course: "Cartographie, séquençage et structure des génomes 2008"
- UNIL PhD Literature seminar: "Systematic interpretation of genetic interactions using protein networks"
- UNIL PhD course: "Biology for non-biologists 2018"
- UNIL PhD course: Biology for non-biologists 2019
- UNIL PhD literature seminar: "Diffusion and scaling during early embryonic pattern formation"
- UNIL PhD literature seminar: "Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls"
- UNIL PhD literature seminar: "Optimality and evolutionary tuning of the expression level of a protein"
- UNIL PhD literature seminar: "Systematic interpretation of genetic interactions using protein networks"
- UNIL PhD seminar: "Bi-weekly meeting for graduate students in biostatistics and computational biology"
- UNIX recipes
- Uncovering modes of evolution: testing for selection versus genetic drift in species diversification
- Updated vs deprecated genotypes
- Useful tools
- Vascular properties of patients with peripheral artery disease
- Vital-IT
- Vnc
